ライフサイエンスコーパス: japonicus

1 ng isoflavonoid biosynthesis in Lotus (Lotus japonicus).

2 sposase function (except Schizosaccharomyces japonicus).

3 h LHK1 to mediate nodule organogenesis in L. japonicus.

4 stem in the saprophytic bacterium Cellvibrio japonicus.

5 lso sufficient for nodule formation in Lotus japonicus.

6 (order Poecilostomatoida) than to that of T. japonicus.

7 ndogenous SYMRK in roots of the legume Lotus japonicus.

8 acclimation to tolerate drought stress in L. japonicus.

9 inhibition of LNP blocks nodulation in Lotus japonicus.

10 haromyces octosporus and Schizosaccharomyces japonicus.

11 leosome-excluding proteins functioning in S. japonicus.

12 her sequenced legumes, Glycine max and Lotus japonicus.

13 d a decreased rate of nodule formation on L. japonicus.

14 different degrees in Pisum sativum and Lotus japonicus.

15 NA genomes from an Asian congener, Tigriopus japonicus.

16 quercertin 2,3-dioxygenase from Aspergillus japonicus.

17 to elicit nodules on its host legume, Lotus japonicus.

18 determinate symbiosis with the legume Lotus japonicus.

19 osaccharomyces pombe and Schizosaccharomyces japonicus.

20 sorhizobium loti, the natural symbiont of L. japonicus.

21 ateral root formation and symbiosis in Lotus japonicus.

22 obacterium and Carnobacterium, dominated Ae. japonicus.

23 sis in the fission yeast Schizosaccharomyces japonicus.

24 any genes required for AM formation in Lotus japonicus.

25 opment of nodules in the model legume, Lotus japonicus.

26 olonisation and rhizobial infection in Lotus japonicus.

27 uppression of plant innate immunity in Lotus japonicus.

28 a negative role in rhizobial infection in L. japonicus.

29 for infection thread (IT) formation in Lotus japonicus.

30 squito species, Aedes triseriatus, and Aedes japonicus.

31 d with Nod factor receptor 5 (NFR5) in Lotus japonicus.

32 oles of neuropeptide signaling systems in A. japonicus.

33 lular localizations in Arabidopsis and Lotus japonicus.

34 peptides have already been identified in A. japonicus.

35 e organogenesis, and nitrogen fixation in L. japonicus.

36 similar to the clv2 mutants of pea and Lotus japonicus.

37 in both infection and organogenesis in Lotus japonicus.

38 ermal cells of Medicago truncatula and Lotus japonicus.

39 osaccharomyces pombe and Schizosaccharomyces japonicus.

40 osaccharomyces pombe and Schizosaccharomyces japonicus [1-3].

41 tified in Medicago truncatula (52) and Lotus japonicus (53), including pseudogenes and non-functional

42 e studied NE assembly in Schizosaccharomyces japonicus, a fission yeast that undergoes partial mitoti

43 In Lotus japonicus, a LysM receptor kinase, EPR3, distinguishes c

44 Schizosaccharomyces japonicus, a member of the fission yeast clade, is one s

45 cular modelling, and the observation that L. japonicus accessions lacking cyanogenic flowers contain

46 exploring the phenotypic diversity of Lotus japonicus accessions that uncouple nodule organogenesis

47 In addition, previously published L. japonicus Affymetrix data are included in the database,

48 e induction of isoflavonoid production in L. japonicus also involves the coordinated down-regulation

49 p records of an ortholog of GmN70 from Lotus japonicus also showed anion currents with a similar sele

50 romosomal genomes of two Anastatus wasps, A. japonicus and A. fulloi, and leverage these genomes to s

51 lase (NahG) in both stably transformed Lotus japonicus and composite Medicago truncatula plants.

52 ensitive ethylene detection system for Lotus japonicus and found that ethylene production increased a

53 milar to MtDHDPS2 and 3 are present in Lotus japonicus and Glycine max, suggesting the existence of a

54 YB14, was constitutively overexpressed in L. japonicus and induced the expression of at least 12 gene

55 for efficient cellodextrin utilization in C. japonicus and is constitutively expressed at high levels

56 compare these results to the AM model Lotus japonicus and its ipd3 knockout mutant cyclops-4.

57 Here we show that Lotus japonicus and Medicago truncatula possess very similar L

58 Studies in the model legumes Lotus japonicus and Medicago truncatula showed that rhizobium

59 he Medicago truncatula ortholog of the Lotus japonicus and pea (Pisum sativum) NIN gene.

60 he GS52 apyrase can enhance nodulation in L. japonicus and points to an important role for this group

61 accharomyces cryophilus, Schizosaccharomyces japonicus and Schizosaccharomyces octosporus).

62 Here we find in Schizosaccharomyces japonicus and Schizosaccharomyces pombe that, during act

63 na Sea, interspecific comparisons between T. japonicus and T. nanhaiensis indicated possible evolutio

64 two economically important fish (Trichiurus japonicus and T. nanhaiensis) that inhabit the continent

65 o truncatula with those of the diploid Lotus japonicus and the polyploid Glycine max.

66 d that P. palmivora induces disease in Lotus japonicus and used this interaction to identify cellular

67 NOD FACTOR RECEPTOR1 (LjNFR1) and LjNFR5 (L. japonicus) and LYSM DOMAIN CONTAINING RECEPTOR KINASE3 (

68 the previously identified genes HAR1 (Lotus japonicus) and NARK (Glycine max) are orthologs based on

69 ops owl (Otus sunia), eastern buzzard (Buteo japonicus), and common kestrel (Falco tinnunculus).

70 tly occurs in the sea cucumber (Apostichopus japonicus), and Vibrio splendidus is one of the main bac

71 unigene sets from Medicago truncatula, Lotus japonicus, and soybean (Glycine max and Glycine soja) to

72 e model legume species, M. truncatula and L. japonicus, and substantially enhanced the knowledgebase

73 ymbiotic and non-symbiotic development of L. japonicus, and suggest that regulatory processes control

74 egume species, Medicago truncatula and Lotus japonicus, and two crop species, Glycine max (soybean) a

75 at has 27% identity to an L-AAO from Scomber japonicus (animal, mackerel) and is a member of the fami

76 S. japonicus appears to have optimized cytosolic NADH oxida

77 pment of root hairs in the angiosperms Lotus japonicus, Arabidopsis thaliana, and rice (Oryza sativa)

78 mackerel (Trachurus symmetricus and Scomber japonicus) are thriving.

79 The L. japonicus arpc1 mutant showed a distorted trichome pheno

80 This establishes S. japonicus as a unique system that switches between symme

81 osaccharomyces pombe and Schizosaccharomyces japonicus, as a comparative model system.

82 egume species, Medicago truncatula and Lotus japonicus, as well as data available for Arabidopsis tha

83 itrogen (N) fixing nodules (Fix(+)) of Lotus japonicus, as well as the link of S-metabolism to symbio

84 K1), in rice, Medicago truncatula, and Lotus japonicus, as well as the non-host of AM fungi, Arabidop

85 a family 35 CBM, derived from the Cellvibrio japonicus beta-1,4-mannanase Man5C.

86 s the light on the metabolic machinery of C. japonicus, but also expands the repertoire of characteri

87 a natural compound isolated from Chloranthus japonicus, can activate AMPK and modulate glucose metabo

88 Although the DMI1 homologs from Lotus japonicus, CASTOR and POLLUX, were recently reported to

89 We have isolated a Lotus japonicus cDNA corresponding to a highly abundant, late

90 S. japonicus cells lacking Cmp7 have compromised NE sealing

91 arkably however, similar to S. pombe, the S. japonicus cells switch cell/mating type after undergoing

92 and sequenced and their expression in Lotus japonicus characterised.

93 Here, we show that the Lotus japonicus Ckx3 cytokinin oxidase/dehydrogenase gene is i

94 amide genes in the sea cucumber Apostichopus japonicus (class Holothuroidea) and the starfish Patiria

95 We showed that the A. japonicus coelomic fluids plus antibiotics induce 100-fo

96 ter cells more readily in the presence of A. japonicus coelomic fluids.

97 us 15 cm, Trachurus trachurus 40 cm, Scomber japonicus colias 60 cm) was carried out using non-conven

98 G. japonicus consumed glucose most quickly and achieved the

99 Flowers and leaves of Lotus japonicus contain alpha-, beta-, and gamma-hydroxynitril

100 erized plant genomes, the TE component of L. japonicus contained several surprises.

101 We show here that L. japonicus contains a small family of four cytokinin rece

102 Gene expression profiling of C. japonicus demonstrated that three of the 12 predicted be

103 DNA sequences of the mating-type loci of S. japonicus differ vastly from those of the S. pombe speci

104 We show that although S. japonicus does not respire oxygen, unlike S. pombe, it i

105 We have identified a gene in Lotus japonicus, Epr3, encoding a receptor-like kinase that co

106 ted in mycorrhizal roots of the legume Lotus japonicus, expression of a unique GRAS protein particula

107 omparison of our data to those for Tigriopus japonicus (family Harpacticidae, order Harpacticoida) re

108 ed specialisation in HNG based defence in L. japonicus flowers is discussed in the context of balanci

109 The nectar of L. japonicus flowers was also found to contain HNGs and add

110 anesulfonate mutagenized population of Lotus japonicus for mutants defective in IT formation and clon

111 tilization in the soil saprophyte Cellvibrio japonicus found that only one of four predicted beta-glu

112 hat it is a new taxon, Paralitherizinosaurus japonicus gen.

113 e skeleton of a new hadrosaurid, Kamuysaurus japonicus gen. et sp. nov., was discovered from the oute

114 Here we identify a Lotus japonicus gene encoding a predicted ACTIN-RELATED PROTEI

115 me functional genomics, we developed a Lotus japonicus Gene Expression Atlas (LjGEA), which provides

116 mber of a small family of closely related L. japonicus genes.

117 Finally, the L. japonicus genome contains many hundreds, perhaps thousan

118 Database studies of the Lotus japonicus genome have revealed the presence of 24 sequen

119 vailability of a significant amount of Lotus japonicus genome sequence has permitted for the first ti

120 No other AS genes were detected in the L. japonicus genome.

121 light of previous studies on the Cellvibrio japonicus GH26 mannanases CjMan26A and CjMan26C reveals

122 tic steps form nitrogen-fixing nodules on L. japonicus Gifu after a delay, whereas mutants affected i

123 ween Mesorhizobium loti strain R7A and Lotus japonicus Gifu, rhizobial exopolysaccharide (EPS) plays

124 nscript data from Medicago truncatula, Lotus japonicus, Glycine max and Arabidopsis thaliana.

125 eated the physiological roles of the four C. japonicus glycoside hydrolase family 3 (GH3) members on

126 ied this methodology to mutants of the Lotus japonicus GRAS transcription factor RAM1 and the Oryza s

127 atosaurus izanagii) and derived (Kamuysaurus japonicus) hadrosaurids during the Maastrichtian in Japa

128 s well as target promoter induction in Lotus japonicus hairy roots depends on MYCS (MYCORRHIZA SEQUEN

129 The bacterium Cellvibrio japonicus has a robust capacity for plant polysaccharide

130 Lotus japonicus has been used for decades as a model legume to

131 is unclear and the function of VPY in Lotus japonicus has not been studied.

132 CjLPMO10A from the soil bacterium Cellvibrio japonicus, have multiple CBMs (CjCBM5 and CjCBM73).

133 nvestigations of neuropeptide function in A. japonicus, here we have analysed genomic and transcripto

134 e conducted a detailed analysis of the Lotus japonicus hypernodulating mutants, har1-1, 2 and 3 that

135 S. japonicus hyphae also remain mononuclear and undergo com

136 We demonstrate unusual features of S. japonicus hyphae: these cells lack a Spitzenkorper, a ve

137 is observed in Medicago truncatula and Lotus japonicus, implying a conserved mechanism of cell state

138 japonicus in North America and a continued rapid expansi

139 japonicus in sterol-free media is an interesting trait f

140 Using chub mackerel (Scomber japonicus) in the Yellow Sea as a case study, we develop

141 e need to learn more about the biology of A. japonicus, including processes such as aestivation, evis

142 expression of the GS52 ecto-apyrase in Lotus japonicus increased the level of rhizobial infection and

143 d nodulation (Nod) factor receptors of Lotus japonicus initiate differential signaling of immunity or

144 Bacterial richness was highest in Ae. japonicus, intermediate in Ae. triseriatus, and lowest i

145 The sea cucumber Apostichopus japonicus is a foodstuff with very high economic value i

146 Here we show that CASTOR from Lotus japonicus is a highly selective Ca(2+) channel whose act

147 Lotus japonicus is a model species for legume genomics.

148 nhoek, 37, 353-358] that Schizosaccharomyces japonicus is exceptional among yeasts in growing anaerob

149 cteroides thetaiotaomicron, the genome of C. japonicus is predicted to encode a large number of GH43

150 Most importantly, the genome of C. japonicus is remarkably similar to that of the gram-nega

151 olipid fatty acyl asymmetry, prevalent in S. japonicus, is crucial for accommodating both sterols and

152 e III sucrose transporter homolog from Lotus japonicus, is expressed in nodules and its transport act

153 VTL8, the closest homologue of SEN1 in Lotus japonicus, is the main route for delivering iron to symb

154 esponses to waterlogging of the legume Lotus japonicus, it was previously suggested that, during hypo

155 Aedes japonicus japonicus (Theobald) (Diptera: Culicidae) has

156 escribed cDNA, LjNOD16, which encodes the L. japonicus late nodulin Nlj16.

157 e the expression pattern observed for the L. japonicus leghemoglobin gene.

158 und to be drastically altered in specific L. japonicus lines carrying monogenic-recessive mutations i

159 The single- and double-copy sense gs52 L. japonicus lines had enhanced nodulation that correlated

160 phenotypically normal divisions with the S. japonicus lipin acquiring an S. pombe-like mitotic phosp

161 duplicated in L. japonicus We obtained a L. japonicus Ljein2a Ljein2b double mutant that exhibits co

162 Therefore, we postulate that the L. japonicus LjNOD70 gene family encodes nodule-specific tr

163 aracterization carried out in independent L. japonicus LORE1 insertion lines indicates a positive rol

164 errant nodulation phenotypes using the Lotus japonicus LORE1 insertion mutant collection.

165 on, we determined the structure of the Lotus japonicus (Lotus) exopolysaccharide receptor 3 (EPR3) ec

166 Therefore the S. pombe and S. japonicus mating systems provide the first two examples

167 ed crystal structures of Schizosaccharomyces japonicus Mis16 alone and in complex with the helix 1 of

168 noted, this feature is also conserved in T. japonicus mtDNAs; whether this sequence is processed int

169 as might be inferred from work on the Lotus japonicus MtLYK10 ortholog, LjEPR3.

170 ed phenotypic analysis of two independent L. japonicus mutant alleles and investigated the regulation

171 The L. japonicus mutant carrying the loss-of-function lhk1-1 al

172 rd genetic approach, we identified two Lotus japonicus mutants defective in AM-specific paralogs of l

173 expression studies and a selection of Lotus japonicus mutants uncoupling different symbiosis stages

174 Together with previously described L. japonicus Nck-associated protein1 and 121F-specific p53

175 l structure of the signaling-competent Lotus japonicus NFR5 intracellular domain, comprising the juxt

176 he characterization of a member of the Lotus japonicus nitrate transporter1/peptide transporter famil

177 Here, we show that the Lotus japonicus Nod factor receptor 5 (NFR5) and Nod factor re

178 Here we identify a Lotus japonicus nodulation pectate lyase gene (LjNPL), which i

179 (Medicago truncatula) and determinate (Lotus japonicus) nodulation.

180 jNOD70, associated with late stages in Lotus japonicus nodule development and/or functioning was char

181 duced during late developmental stages of L. japonicus nodule organogenesis and provide important, no

182 was found to be enhanced specifically in L. japonicus nodules, whereas the LjPP2C2 gene was expresse

183 e expressed only in the infected cells of L. japonicus nodules.

184 pombe, S. octosporus, S. cryophilus, and S. japonicus--occupies the basal branch of Ascomycete fungi

185 ition from the Japanese white-eye (Zosterops japonicus) on native Hawaiian passerine birds.

186 acid bacteria species (one of Gluconobacter japonicus, one of Gluconobacter oxydans and one of Aceto

187 In the model legume Lotus japonicus, one of these LegCYC genes has been shown, lik

188 bgroups of proteins that were specific to L. japonicus or closely related to known regulators of the

189 s to establish putative M. truncatula and L. japonicus orthologues.

190 iana benthamiana, Medicago truncatula, Lotus japonicus, Oryza sativa) and captured the altered coloni

191 ago truncatula, Glycine max (soybean), Lotus japonicus, Phaseolus vulgaris (common bean), Cicer ariet

192 discovered in the sea cucumber Apostichopus japonicus (Phylum Echinodermata; Class Holothuroidea).

193 Approximately 50% of the predicted C. japonicus plant-degradative apparatus appears to be shar

194 Spot inoculations of NahG-expressing L. japonicus plants confirmed increased nodulation in these

195 anscripts and metabolites that changed in L. japonicus plants during the transfer from photorespirati

196 Transgenic Lotus japonicus plants were constructed constitutively express

197 , Medicago truncatula, Glycine max and Lotus japonicus plus two reference plant species, A. thaliana

198 comparison of the demographic history of T. japonicus populations from the East China and South Chin

199 The findings suggest that L. japonicus possesses a voltage-dependent cation efflux ch

200 The results presented here predict that C. japonicus possesses an extensive range of glycoside hydr

201 model legumes, Medicago truncatula and Lotus japonicus, provide a unique opportunity to address biolo

202 model legumes, Medicago truncatula and Lotus japonicus, provides an opportunity for large-scale seque

203 As in M. truncatula, the L. japonicus ram1 mutant lines show compromised AM coloniza

204 pment: arbuscule branching is arrested in L. japonicus ram1 mutants, and ectopic expression of RAM1 a

205 line, we identify two novel alleles of Lotus japonicus REDUCED ARBUSCULAR MYCORRHIZA1 (RAM1) encoding

206 ssembly of the actomyosin ring in mitotic S. japonicus relies on the cortical anchor protein Cdc15 re

207 Symbiosis between M. loti and L. japonicus requires bacterial synthesis of secreted and c

208 NahG expression in L. japonicus resulted in a marked reduction of SA levels.

209 n-of-function CNGC mutation (brush) in Lotus japonicus resulting in a leaky tetrameric channel.

210 ty in its close relative Schizosaccharomyces japonicus, revealing a remarkable evolutionary divergenc

211 Despite homology with L. japonicus RinRK1 (LjRinRK1), these proteins are function

212 ocalized within distinct motile puncta in L. japonicus root hairs and in Nicotiana benthamiana leaves

213 changes in the cytoskeleton of living Lotus japonicus root hairs, which precede root-hair deformatio

214 ification of the streptophyte-specific Lotus japonicus ROOTHAIRLESS LIKE (LRL) transcription factor (

215 bHLH) transcription factors encoded by LOTUS JAPONICUS ROOTHAIRLESS1-LIKE (LRL) genes positively regu

216 ot a factor controlling N-assimilation in L. japonicus roots during stable growth in N-sufficient con

217 nes in a sliding developmental zone of Lotus japonicus roots.

218 The A. japonicus SALMFamide precursor comprises eight putative

219 n transporter family and homologous to Lotus japonicus SEN1 (LjSEN1), which is essential for nitrogen

220 eport that the Japanese sea catfish Plotosus japonicus senses local pH-associated increases in H(+)/C

221 The diving beetle Cybister japonicus Sharp shows a remarkable sexual dimorphism.

222 japonicus SHC gene (Sjshc1) in Saccharomyces cerevisiae

223 japonicus SHC were found in other yeast species.

224 japonicus showed high similarity to bacterial squalene-h

225 ns biotype pipiens, Aedes aegypti, and Aedes japonicus showed no transmission, Aedes albopictus demon

226 japonicus showed the presence of hopanoids, a class of c

227 Significantly, several of the L. japonicus Sireviruses have recently amplified and may st

228 Here we show that Lotus japonicus SMAX1 is specifically degraded in the presence

229 e the kinase domain of NF receptors in Lotus japonicus suffices for nodule organogenesis, their extra

230 high-turgor cells in the phloem cap of Lotus japonicus, suggesting that storage of defensive compound

231 The Lotus japonicus SYMBIOSIS RECEPTOR-LIKE KINASE (SYMRK) is requ

232 -associated protein interactomes using Lotus japonicus symbiotically active receptor kinases as a tes

233 ogon rubripinnis (Tetrarogidae) and Inimicus japonicus (Synanceiidae), two representative venomous sp

234 ils are predominantly 16-18 carbons long, S. japonicus synthesizes unusual "asymmetrical" glycerophos

235 The Lotus japonicus T-DNA insertion line T90, carrying a promoterl

236 2C1 and LjPP2C2) from the model legume Lotus japonicus that encode protein phosphatase type 2C (PP2C)

237 d POLLUX, the twin homologous genes in Lotus japonicus that encode putative ion channel proteins.

238 characterization of a gene family from Lotus japonicus that encodes a novel class of plant PITP-like

239 rod-shaped fission yeast Schizosaccharomyces japonicus that relies on cellular geometry cues to posit

240 In Schizosaccharomyces japonicus, the APH is required for reticulon's exclusive

241 In Schizosaccharomyces japonicus, the conserved LEM-domain nuclear envelope pro

242 In Papilionoideae legume, Lotus japonicus, the development of dorsal-ventral (DV) asymme

243 Ned1 is not regulated during division in S. japonicus, thus limiting membrane availability and neces

244 ids, mimics of eukaryotic sterols, allows S. japonicus to thrive in anoxia, where sterol biosynthesis

245 Interestingly, analysis of the A. japonicus transcriptome reveals that the only protein co

246 In Lotus japonicus, two symbiotic cation channels, CASTOR and POL

247 In L. japonicus, two VPY orthologs (LjVPY1 and LjVPY2) were id

248 Retroengineered S. pombe synthesizing the S.-japonicus-type phospholipids exhibits unfolded protein r

249 ing in the fission yeast Schizosaccharomyces japonicus, unlike its role in S. pombe.

250 We show that S. japonicus uses the Cdc42 polarity module to adjust its g

251 n cellulose utilization and suggests that C. japonicus utilizes a combination of hydrolytic and oxida

252 ontrolled by EIN2, which is duplicated in L. japonicus We obtained a L. japonicus Ljein2a Ljein2b dou

253 by the saprophytic soil bacterium Cellvibrio japonicus, we sequenced and analyzed its genome, which p

254 pecies, namely pea (Pisum sativum) and Lotus japonicus, we show that this motor organ identity is reg

255 s modulators of neuromuscular activity in A. japonicus were also identified.

256 ymbiosome membrane of the model legume Lotus japonicus were analyzed by patch-clamp recording.

257 ing nodule organogenesis in the legume Lotus japonicus were identified using mRNA differential displa

258 e (Gln) synthetase in the model legume Lotus japonicus were investigated.

259 llux, and castor pollux double mutants of L. japonicus were rescued by DMI1 alone, while both Lj-CAST

260 between the genomes of M. truncatula and L. japonicus, whereas lower levels of conservation were evi

261 using the fission yeast Schizosaccharomyces japonicus, which breaks and reforms the NE during mitosi

262 that the fission yeast, Schizosaccharomyces japonicus, which can grow in aerobic and anaerobic condi

263 n the GH10 xylanase CjXyn10A from Cellvibrio japonicus, which contains an extended calcium binding lo

264 using the fission yeast Schizosaccharomyces japonicus, which has acquired a squalene-hopene cyclase

265 into a symbiosis with the legume host, Lotus japonicus, which results in the formation of novel plant

266 ells before spreading to the epidermis in L. japonicus While mutant analysis identified redundancy in

267 ble connective tissue in the body wall of A. japonicus, whilst holokinins (PLGYMFR and derivative pep

268 in the recently sequenced fission yeast, S. japonicus (with 36% GC content), which is highly diverge

269 o-mannobiohydrolase CjMan26C from Cellvibrio japonicus, with a conserved glycone region (-1 and -2 su