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1 , VERL, complexed with cognate sperm protein lysin.
2 ic peptide derived from staphylococcal delta-lysin.
3 ockets exposed with arrays of imidazoles and lysines.
4 ne domain, and 3) close to the ubiquitinated lysines.
5 by acetylation (neutralization) of multiple lysines.
6 hat control the ubiquitination state of ENaC lysines.
7 ys-C yields a diGly motif attached to target lysines.
8 the dichlorotriazine favored reactivity with lysines.
9 ng the solvent inaccessibility of the target lysines.
10 ed stable crosslink formation at telopeptide lysines.
11 ii) reductive methylation to dimethylate all lysines.
12 additionally requires contributions of other lysines.
13 y impeded by mutation of the automethylation lysines.
14 ation enzymes are autoneddylated at multiple lysines.
15 ith ubiquitin attachment sites mapped to six lysines.
16 by a mechanism dependent upon cytosolic GDU1 lysines.
17 ely; P < .01) with preferential glycation of lysines 107 and 557, sites involved in fibrin binding an
18 glutamine concentration, GS is acetylated at lysines 11 and 14, yielding a degron that is necessary a
19 ay crystallography, we found that acetylated lysines 115 and 122 in histone H3 are solvent accessible
22 uring neutrophil development, acetylation of lysines 121 and 198 were found to be crucial for termina
23 e simultaneous pseudo-acetylation of hTau at lysines 163, 280, 281 and 369 drastically decreased hTau
24 generation of Lin(Ub)n-Bcl10 requires Bcl10 lysines 17, 31, and 63, CARD11, MALT1, and the HOIP subu
25 ed and used to determine that acetylation of lysines 19 and 26 of MPC2 is enhanced in Akita heart mit
26 This determinant was also detected bound to lysines 195 and 475 of CLV-treated human serum albumin.
27 ith MAST1 blocked ubiquitination of MAST1 at lysines 317 and 545 by the E3 ubiquitin ligase CHIP and
28 further show that KDM4B is ubiquitinated on lysines 337 and 562; simultaneous substitution of these
29 tic stem and progenitor cells and a novel NK-lysin 4(+) cell type, representing a putative cytotoxic
31 dy-state levels of methylation at histone H3 lysines 4 (H3K4me) and 36 (H3K36me) were sensitive to mu
32 Cotranscriptional methylation of histone H3 lysines 4 and 36 by Set1 and Set2, respectively, stimula
33 ng RA exposure, and we found that histone H3 lysines 4 and 9 are demethylated by the lysine-specific
35 IM5alpha internal lysines with Ub especially lysines 45 and 50, rather than modifying the N-terminal
36 We demonstrate that mutations in histone H4 lysines 5 and 12 in yeast confer hypersensitivity to rep
37 etylation of newly synthesized histone H4 at lysines 5 and 12 that accompanies replication-coupled ch
38 olein reacts with lysine residues, including lysines 5 and 12, sites important for chromatin assembly
39 etylation of newly synthesized histone H4 on lysines 5 and 12, which accompanies replication-coupled
41 ythroid-derived 2-related factor 2 (NRF2) on lysines 506 and 508, leading to a reduction in total and
42 found that alpha-synuclein is acetylated on lysines 6 and 10 and that these residues are deacetylate
43 histones H3 and H4 undergo trimethylation at lysines 9 (H3K9), 27 (H3K27), 79 (H3K79), and 20 (H4K20)
44 genic enrichment of acetylated histone H3 at lysines 9 (H3K9ac) and 56 (H3K56ac), activation of cycli
46 IES-associated chromatin is methylated on lysines 9 and 27 of histone H3, marking newly formed het
48 he Pcsk9 gene and deacetylates histone H3 at lysines 9 and 56, thereby suppressing the gene expressio
49 ethodology of studying E. coli cell lysis by Lysin A and its truncations after expressing these prote
52 so demonstrate that the C-terminal domain of Lysin A selectively binds to M. tuberculosis and M. smeg
55 Herein, we report the activity of aryl-alkyl-lysines against C. difficile and associated pathogens.
56 ys(1107), and the combined mutation of these lysines almost completely eliminated both the ubiquitina
58 A mutant GCGR with all five intracellular lysines altered to arginines remains deubiquitinated and
60 trengths and, upon exocytosis into seawater, lysin and sp18 are dispersed to drive fertilization.
61 quantities of two rapidly evolving proteins, lysin and sp18, that are stored at nearly molar concentr
65 The specific arrangement and number of the lysines and arginines of the PBD vary among the lipins.
66 pB), which differ in their selectivity after lysines and arginines, respectively, collectively accoun
67 mologs indicated conservation of a series of lysines and arginines, which could represent a nuclear l
69 ther significant finding of the work is that lysines and cysteines in kinases may adopt neutral and c
71 Here, we combined chemical modification of lysines and multiple-reaction monitoring mass spectromet
72 he bromodomain (BD), which recognizes acetyl-lysines and recruits proteins to sites of acetylation ac
75 d for rapid screening of engineered chimeric lysins and report a unique "chimeolysin", ClyR, with rob
76 ed that LOG2 ubiquitinates GDU1 at cytosolic lysines, and GDU1 protein levels decreased upon co-expre
77 er promising strategies, such as probiotics, lysins, and antimicrobial peptides, are in various stage
80 e asked if nucleophilic (reactive) catalytic lysines are common on the basis of the published crystal
81 w that in the bound structure, the conserved lysines are important for membrane binding, whereas the
83 rated two SMN mutants, SMN(K0), in which all lysines are mutated to arginines and thereby abolishing
85 ns indicate that the roles of the individual lysines are not equivalent and that helical lysines play
87 onjugating enzyme Ubc9, however the acceptor lysines are perfectly accessible in Ran/NTF2 complexes.
92 ntrolled trials will determine if phages and lysins are safe and effective adjuncts or alternatives t
93 iotic resistance, phages and their products (lysins) are rediscovered as antibacterial bioagents.
95 oA dehydrogenase 9, two related enzymes with lysines at positions equivalent to Lys-318/Lys-322, were
97 sheet model of PrP(Sc), not only would these lysines be clustered within the 101-110 region of the pr
98 I) chains as a result of their C-telopeptide lysines being more completely oxidized to aldehydes.
99 en state to positively charged arginines and lysines between the intracellular ends of the voltage-se
101 t by specific amino acids surrounding target lysines but that even optimal sequences require both Ada
104 ate that binding domains from autolysins and lysins can be fused to the Fc region of human IgG, creat
105 For substrates without Ltn1p-accessible lysines, CAT-tailing enabled degradation by exposing lys
107 xymethyl)lysine (CML), N(euro)-(carboxyethyl)lysin (CEL), and methylglyoxal-derived hydroimadazolidin
112 ons of gly-262 and thr-269 in Hsp90beta with lysines convert Hsp90beta to a Hsp90alpha-like protein.
113 Intriguingly, acetylation of several histone lysines correlated with the acetyl-CoA: (iso)butyryl-CoA
114 Escherichia coli, acetylation of proteins at lysines depends largely on a non-enzymatic acetyl phosph
115 , in this study, we investigated whether cNK-lysin derived peptides modulate the immune response in t
116 search on the in vivo behavior of phages and lysins, dialogues between researchers and regulatory age
119 hat RasG ubiquitination occurs at C-terminal lysines equivalent to lysines found in human K-Ras but n
120 electron microcopy indicated that bovine NK-lysins exhibited their antimicrobial activities by lytic
122 predicted to insert a stretch of 13 or more lysines followed by either an in-frame insertion of a re
123 tion results from pausing on consecutive AAA-lysines followed by ribosome sliding on homopolymeric A
128 f the heavy and light chains and susceptible lysines), forming either hemiaminal (+148 Da) or Schiff
129 n occurs at C-terminal lysines equivalent to lysines found in human K-Ras but not in H-Ras and N-Ras
132 site core, whereas the two other active site lysines from the two other domains are not able to move.
134 rovide evidence for the existence of four NK-lysin genes in a repetitive region on cattle chromosome
135 iptional modifications (marks) to histone H3 lysines (H3K4me3, H3K4me1, H3K27ac, H3K27me3, and H3K36m
136 nine substitutions at other known methylated lysines (H3K9 and H3K36) are sufficient to cause specifi
140 orating the core alpha-helical region of cNK-lysin, have antimicrobial activity against apicomplexan
141 tn1p efficiently accessed only nascent-chain lysines immediately proximal to the ribosome exit tunnel
143 ly studies showed that sirtuins deacetylated lysines in a reaction that consumes NAD(+), more recent
149 e have quantified, in total, more than 9,000 lysines in human cell proteomes and have identified seve
152 t NeuCode SILAC partners enables counting of lysines in product ions, and when the information is use
155 Thus, Pro-102 and Pro-105, as well as the lysines in the central lysine cluster, impede amyloid fo
157 revealed that a highly conserved cluster of lysines in the gamma-ENaC N terminus regulates accessibi
158 /SNF and RSC, acetylation of lateral surface lysines in the histone octamer serves as a crucial regul
159 leosomes containing acetylated or methylated lysines in the histone tails of H3 and H4 present in the
161 vealed that ADA and Piccolo NuA4 crotonylate lysines in the N-terminal tails of histone H3 and H4, re
162 lustered in the N-terminal region but not at lysines in the oligomerization, intramembrane, or C-term
163 iquitin-like modifier) by mutating conserved lysines in the polyQ AR that are sites of SUMOylation.
166 Attachment of SUMO moieties to internal lysines in Ubc9 itself can further lead to the formation
168 aradoxically, acetylation of p53 at the same lysines in various cancer cell lines leads to the induct
171 (LLP) motifs and are scarcely substituted by lysines, in contrast to gp120 and the ectodomain of gp41
172 dules, condense the search radius for target lysines, increase the chance of active-site collision wi
177 ted covalent modification of surface-exposed lysines is challenging due to their low intrinsic reacti
178 and that an interaction(s) mediated by these lysines is essential for B. burgdorferi murine infection
181 ebacase, a first-in-class antistaphylococcal lysin, is a direct lytic agent that is rapidly bacteriol
182 rated two OAT1 mutants, each having multiple lysines (K) simultaneously mutated to arginine (R).
184 an Dvl2 DIX domain mono-ubiquitinated at two lysines (K54 and K58) by genetically encoded orthogonal
187 sure of Arabidopsis increases acetylation of lysines K9 and/or K14 of histone H3 at UVR8-regulated ge
188 labels [1-(13)C]glycine and L-[epsilon-(15)N]lysin, L-[1-(13)C]lysine and D-[(15)N]alanine, or D-[1-(
189 different generations of dendrigraft poly-L-lysines leading to quantitative information (i.e., stoic
191 mia, is a homotetramer with multiple surface lysines, limiting conventional approaches for albuminati
192 e substitution at each of a cluster of three lysines (Lys-42, Lys-43, and Lys-135) renders FLNa resis
194 mediate Gap1 ubiquitylation of two possible lysines, Lys-9 and Lys-16, the Aly proteins promote ubiq
196 P accumulation, ubiquitination of cytodomain lysines may represent a key signal controlling APP endos
198 contains an N-terminal carbohydrate-binding lysin motif (LysM) domain and a C-terminal domain of unk
199 characterized by the presence of one or more lysin motif (LysM) domains in the extracytoplasmic porti
200 OXR1 contains the Tre2/Bub2/Cdc16 (TBC), lysin motif (LysM), domain catalytic (TLDc) domain, a mo
201 s nodulation receptor-like kinase (NORK) and lysin motif domain-containing receptor-like kinase 3 (LY
204 ular patterns (MAMPs) that are recognized by LYSIN MOTIF RECEPTOR KINASE5 (LYK5), inducing the format
205 or receptors NOD FACTOR PERCEPTION (NFP) and LYSIN MOTIF RECEPTOR-LIKE KINASE3 (LYK3) in establishing
206 ocess, and it is not known whether the plant lysin-motif receptor-like kinase MtLYK10 intervenes in r
208 perception activates symbiosis signaling via Lysin-motif RLKs and subsequently the common symbiosis s
209 nhibited catalytic activity and labeled four lysines; mutagenesis demonstrated that two of these, Lys
210 f geometrical motifs featuring histidines or lysines near tyrosines, facilitating histidine and lysin
212 onstant pH molecular dynamics, the catalytic lysines of eight unique kinases from various human kinas
214 fer of this fluorophore from IgG to specific lysines of its binding partner SpA but not to bovine ser
217 sin is promoted by acetylation of N-terminal lysines of the Smc3 subunit by the acetyltransferases Ec
219 ations as acetylmimetics to map the relevant lysines on actin for INF2 regulation, focusing on K50, K
220 own by increased acetylation at SIRT6 target lysines on histone 3, reduced TNF-alpha secretion, GLUT-
221 omain family of proteins binds to acetylated lysines on histones and regulates gene transcription.
222 bly transferred ubiquitin to surface exposed lysines on target proteins and even catalyzed the format
223 modomains that mediate binding to acetylated lysines on target proteins to regulate gene expression.
224 ivates UHRF1 ubiquitylation towards multiple lysines on the H3 tail adjacent to the UHRF1 histone-bin
228 has been dominated by random modification of lysines or more site-specific labeling of cysteines, eac
230 he arginines with alanines or more conserved lysines or replacement of isoleucine with alanine or val
231 sfolding of PM proteins likely exposes these lysines or shifts them into the "ubiquitination zone" ac
233 lysines are not equivalent and that helical lysines play a more prominent role in determining bindin
234 be required for the attachment of the phage lysin PlyG with the bacterial envelope and for bacterial
235 of the isotope peaks indicates the number of lysines present in the protein, information that aids in
236 Of interest, mutating any one of the three lysines prevented the ubiquitin conjugation to the other
238 the discovery of a peptide containing methyl lysines recognized by a mAb that binds to native HBHA ~1
239 blocks the functional readout of acetylated lysines, reduced heroin self-administration and cue-indu
240 poly-A tail, encoding for positively charged lysines regardless of the reading frame, would act as a
241 analyses show that yku70 mutants with these lysines replaced by arginines exhibit reduced Ku-DNA ass
246 es, we found that AtPRORP1 exploits specific lysines strategically positioned at the tips of it's V-s
247 d the ubiquitin conjugation to the other two lysines, suggesting that Lys297, Lys303, and Lys315 may
248 or sites, and variable combinations of these lysines support both full transcriptional activity and v
252 caries-causing pathogen as well as the first lysin that kills all four of the bovine mastitis-causing
253 we identify a large set of mostly unexplored lysines that are potentially targetable with covalent in
255 ults in the formation of spatially clustered lysines that could serve as recognition patches for bind
256 ectively transferred between amino groups of lysines that reside within ~10 A at the protein-protein
257 Upon infection, mycobacteriophages produce lysins that catalyze cell wall peptidoglycan hydrolysis
258 he phage genome encodes toxic genes, such as lysins, that kill the bacterium during the phage infecti
259 DJ-1 deglycates cysteines, arginines, and lysines (the three major glycated amino acids) of serum
261 ompared to traditional NHS ester-labeling of lysines, the cysteine-maleimide strategy resulted in far
262 1 ubiquitination, we converted each of these lysines to arginine and found that replacing two of thes
264 ploit Schiff imine formation via the exposed lysines to efficiently hydrolyze both activated and inac
273 Overall, the findings suggest aryl-alkyl-lysines warrant further investigation as novel agents to
280 riaminepentaacetic acid (p-SCN-DTPA) via the lysines, whereas JVZ-007-cys was conjugated to maleimide
281 domain is ubiquitinated in vivo at multiple lysines, which can be antagonized by various deubiquitin
282 ly 168 polypeptides contained early glycated lysines, which did not resemble the sites of advanced gl
283 the screening method resulting in a powerful lysin with potential for treating most streptococcal ass
284 lecule, they are directly labeled on surface lysines with a biotinylated derivative of the small ubiq
285 we show that substitution of APP C-terminal lysines with arginine disrupts APP ubiquitination and th
287 Ube2W targets multiple TRIM5alpha internal lysines with Ub especially lysines 45 and 50, rather tha
288 pulsion between four closely spaced cationic lysines within a central lysine cluster of residues 101-
289 h4-Rsp5 can target and ubiquitinate multiple lysines within a restricted distance from the membrane,
291 ditional mutation of Ku70 K160 and six other lysines within Ku80 were required to eliminate all activ
298 monstrate that Gcn5p acetylation of separate lysines within the zinc cluster domain negatively impact
300 critical for their interaction and multiple lysines within TPP1 that are oligo-ubiquitinated and deu