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1 mTEC are a heterogeneous population of cells that differ
2 mTEC expression of LTbetaR is essential for the developm
3 mTECs also express multiple transcription factors requir
4 mTECs regulate T cell tolerance by ectopically expressin
7 ure thymocytes are not essential for Aire(+) mTEC development, use of an inducible ZAP70 transgenic m
8 Despite this role, the mechanisms of Aire(+) mTEC development remain unclear, particularly those stag
9 apping OPG expression to a subset of Aire(+) mTEC, our data show how cis- and trans-acting mechanisms
10 reveals that distinct DC subsets and AIRE(+) mTECs contribute substantially to presentation of divers
11 Aire(-) mTEC progenitors into CD80(+)Aire(+) mTECs, and that transplantation of RANK-deficient thymic
12 80(lo), Aire(-) mTECs into CD80(hi), Aire(+) mTECs; responsiveness to RANKL; and sustained expression
13 hanisms leading to the generation of Aire(+) mTECs and highlight a previously unrecognized role for C
14 at emergence of the first cohorts of Aire(+) mTECs at this key developmental stage, prior to alphabet
15 nally, although initial formation of Aire(+) mTECs depends upon RANK signaling, continued mTEC develo
19 factor-7, maintained a stable pool of Aire(+)mTEC(high), with an improved TRA transcriptome despite a
22 maturation of RANK-expressing CD80(-)Aire(-) mTEC progenitors into CD80(+)Aire(+) mTECs, and that tra
23 erminal differentiation of CD80(lo), Aire(-) mTECs into CD80(hi), Aire(+) mTECs; responsiveness to RA
24 ing medullary thymic epithelial cells (Aire1 mTEC) and a decrease in the diversity of Aire-dependent
25 lineage-tracing analysis indicated that all mTECs have a history of receiving a notch signal, consis
28 However, the mechanisms controlling cTEC and mTEC production from the common TEPC are not understood.
29 d medullary thymic epithelial cell (cTEC and mTEC) lineages are essential for inducing T cell lineage
30 ets that reside within both the mTEC(hi) and mTEC(lo) compartments and that represent direct targets
31 edullary thymic epithelial cells (mTEC), and mTEC development in turn requires signals from mature si
32 lish NOTCH as a potent regulator of TEPC and mTEC fate during fetal thymus development, and are thus
33 Thus, GILT expression in thymic APCs, and mTECs in particular, preferentially facilitates MHC clas
34 tively than adult TECs; 2) whereas cTECs and mTECs had similar turnover rates in young mice, the turn
35 both cortical and medullary TECs (cTECs and mTECs) proliferated more actively in females than males.
39 ency of Il7(YFP+) TECs gradually declines as mTEC development unfolds, we explored the relationship b
43 fore, while protecting against autoimmunity, mTECs simultaneously limit the generation of tumor-speci
44 reveal an unappreciated cooperation between mTECs and CD8alpha(+) DCs for presentation of Aire-induc
46 pha transgene also rescues the UEA-1 binding mTEC subset even though K5 expression is not detectable
49 oxN1 is required for the development of both mTECs and cTECs in thymic organogenesis, it is most impo
50 cells, with transcriptional features of both mTECs and dendritic cells, comprising four major sub-gro
52 r, model antigen expression predominantly by mTEC(lo) supports TCRalphabeta(+) CD8alphaalpha intraepi
54 en this autophagy substrate was expressed by mTECs in high amounts, endogenous presentation and indir
58 -25, while LTbetaR controls CD104(+)CCL21(+) mTEC(low) that are capable of IL-15-transpresentation fo
60 ll, Il7(YFP+) TECs can generate some CD80(+) mTECs in a stepwise differentiation process via YFP(-)Ly
61 Gas2l2(-/-) mouse tracheal epithelial cell (mTEC) cultures and in X. laevis embryos treated with Gas
62 sed primary murine tracheal epithelial cell (mTEC) cultures to investigate antiviral and cytokine res
63 show that medullary thymic epithelial cell (mTEC) development involves hemopoietic cross-talk, and n
65 we examine medullary thymic epithelial cell (mTEC) heterogeneity and its influence on CD1d-restricted
66 del of the medullary thymic epithelial cell (mTEC) lineage from immature MHC class II (MHCII)(lo) to
67 stimulate medullary thymic epithelial cell (mTEC) maturation are partially elucidated, the signals t
68 t contains medullary thymic epithelial cell (mTEC) networks to support negative selection and Foxp3(+
70 at mature medullary thymic epithelial cells (mTEC(high)) expressing the autoimmune regulator are targ
71 in mature medullary thymic epithelial cells (mTEC(high)) partly controlled by the autoimmune regulato
73 olerance, medullary thymic epithelial cells (mTEC) collectively express most protein-coding genes, th
75 generate medullary thymic epithelial cells (mTEC) from their immature progenitors, we describe work
76 e thymus, medullary thymic epithelial cells (mTEC) regulate T cell tolerance via negative selection a
77 endent on medullary thymic epithelial cells (mTEC), and mTEC development in turn requires signals fro
78 n, namely medullary thymic epithelial cells (mTECs) and dendritic cells, whereas TRP1 expression was
79 d Aire(+) medullary thymic epithelial cells (mTECs) and on dendritic cells (DCs) in the thymic medull
80 in mouse medullary thymic epithelial cells (mTECs) and peripheral lymphoid stromal cells, which have
81 genes in medullary thymic epithelial cells (mTECs) and, consequently, negative selection of effector
83 role for medullary thymic epithelial cells (mTECs) during iNKT cell development in the mouse thymus.
84 xpressing medullary thymic epithelial cells (mTECs) during the embryonic-neonatal period being both n
87 relevant medullary thymic epithelial cells (mTECs) include a self-antigen-displaying subset that exh
89 tation by thymic medullary epithelial cells (mTECs) is controlled predominantly by Aire at the transc
90 (TRAs) in medullary thymic epithelial cells (mTECs) is essential for the induction of self-tolerance
92 APCs and medullary thymic epithelial cells (mTECs) on the conventional and Treg TCR repertoire, as w
94 xpressing medullary thymic epithelial cells (mTECs) play a key role in preventing autoimmunity by exp
97 APCs and medullary thymic epithelial cells (mTECs) played nonoverlapping roles in shaping the T cell
99 xpressing medullary thymic epithelial cells (mTECs) provide a spectrum of tissue-restricted Ags that,
100 elopment, medullary thymic epithelial cells (mTECs) provide appropriate instructive cues in the thymi
101 ated that medullary thymic epithelial cells (mTECs), a unique type of APC of stromal origin, possess
104 s involve medullary thymic epithelial cells (mTECs), which use endogenously expressed peripheral-tiss
105 epends on medullary thymic epithelial cells (mTECs), whose development, in turn, requires signals fro
106 murine and human medullary epithelial cells (mTECs), with citrullinated proteins detected in murine m
107 xpressing medullary thymic epithelial cells (mTECs), without affecting its expression in the beta-cel
115 mTECs depends upon RANK signaling, continued mTEC development to the involucrin(+) stage maps to acti
116 , their impact on the mechanisms controlling mTEC homeostasis is poorly understood, as are the proces
118 in nude mice, and associated with defective mTEC-mediated elimination of thymocytes in a T cell rece
120 esignated as ID-TEC mice for insulin-deleted mTEC) developed diabetes spontaneously around 3 weeks af
124 nalysis reveals that self-antigen-displaying mTECs, including Aire-expressing mTECs and thymic tuft c
129 Here, we show that emergence of the earliest mTEC lineage-restricted progenitors requires active NOTC
131 transcriptome of medullary thymic epithelia (mTECs) to produce a stroma decorated with peripheral sel
133 , the extent of medullary thymic epithelium (mTEC) heterogeneity, and the mechanisms that mediate the
136 -displaying mTECs, including Aire-expressing mTECs and thymic tuft cells, are derived from CCL21-expr
138 Thus, therapies to deplete Aire-expressing mTECs represent an attractive strategy to increase the p
140 gnaling pathway selectively in K5-expressing mTECs and 2) the K5-expressing subset either contains im
141 nate immune cell system drives initial fetal mTEC development via expression of RANKL, but not CD40L.
144 or of NF-kappaB (RANK), which is central for mTEC differentiation, deficiency of p53 in TECs altered
145 and CD40, which are otherwise necessary for mTEC development, but is not sufficient to overcome the
146 we highlight recent work showing a role for mTEC-mediated thymic selection in maintaining maternal-f
152 and Hnf4gamma in TECs ablated entero-hepato mTECs and downregulated numerous gut- and liver-associat
155 MHC class II (MHCII)(lo) to mature MHCII(hi) mTECs has recently been extended to include a third stag
161 e needed to overcome TRAF3-imposed arrest in mTEC development mediated by inhibition of nonclassical
162 rWSN NS1 R38A replication is attenuated in mTEC cultures; however, viral antigen is detected predom
165 , p53cKO mice presented premature defects in mTEC-dependent regulatory T-cell differentiation and thy
166 CD40-CD40L results in profound deficiency in mTEC development comparable to that observed in the abse
167 (m) and cortical TEC, further elaborated in mTEC, and completed in mature mTEC expressing the autoim
168 Comprehensive assessment of SF expression in mTEC identified a small set of nonpromiscuously expresse
170 inally, we show that whereas the increase in mTEC availability in OPG-deficient (Tnfrsf11b(-/-)) mice
171 olecular components and pathways involved in mTEC differentiation in general and in promiscuous gene
175 dence for a stepwise involvement of TNFRs in mTEC development, with CD40 upregulation induced by init
177 opic expression of type II collagen (CII) in mTECs and the corresponding central tolerance to CII are
179 us, although it modulates gene expression in mTECs and in addition affects the size of the medullary
180 Our findings characterize TRA expression in mTECs as a coordinated process that might involve local
181 Aire-dependent control of Il7 expression in mTECs regulated the size of thymic IL-17A(+)Vgamma6(+)Vd
182 further that depletion of Ins2 expression in mTECs was sufficient to break central tolerance and indu
183 nduces tissue-specific antigen expression in mTECs, affected the TCR repertoire in a manner distinct
186 rence for short-3'UTR transcript isoforms in mTECs, a feature preceding Aire's expression and correla
187 ment of enhancer-associated histone marks in mTECs and also has characteristics of being an NF-kappaB
188 found that humans also lacked alpha-MyHC in mTECs and had high frequencies of alpha-MyHC-specific T
189 mTEC progenitors and dramatic reductions in mTECs during fetal stages, consistent with defects in mT
192 otherwise tissue-specific antigens (TSAs) in mTECs, and here we highlight recent work showing a role
193 Cs are highly heterogeneous; each individual mTEC expresses a limited spectrum of TRAs, and the frequ
194 saying chromatin accessibility in individual mTECs, we uncovered signatures of lineage-defining trans
196 p3(+) thymocyte lineages, in which an intact mTEC compartment is a prerequisite for Foxp3(+) nTreg ce
197 nstrates that the emergence of involucrin(+) mTECs critically depends upon the presence of mature sin
200 xpressed genes were confined to the CD80(lo) mTEC subset and preferentially included AIRE-independent
201 high rate of apoptosis in pre-Aire MHCII(lo) mTECs points to a "quality control" step during early mT
202 ly differentiated post-Aire TPA(hi)MHCII(lo) mTECs were marked for apoptosis at an exceptionally high
204 elaborated in mTEC, and completed in mature mTEC expressing the autoimmune regulator gene (Aire).
205 ive differentiation stages within the mature mTEC subset and, in vitro, interconverted along this seq
209 pithelial lymphocyte development; meanwhile, mTEC(hi)-restricted expression preferentially induces T(
212 hat a functional compromise of the medullary mTEC(high) compartment may link alloimmunity to the deve
213 e to cells of cortical (cTEC) and medullary (mTEC) phenotypes, via compartment-specific progenitors.
214 oter-driven somatic epithelial cells (mostly mTECs and possibly some adult epithelial stem cells) was
218 tories, stages and subtypes, including novel mTEC subsets, such as chemokine-expressing and ciliated
219 s study, we have investigated the control of mTEC homeostasis and examined how this process impacts t
220 n of Notch1 in TECs resulted in depletion of mTEC progenitors and dramatic reductions in mTECs during
221 ll TECs resulted in widespread expression of mTEC progenitor markers and profound defects in TEC diff
224 tional heterogeneity allowed partitioning of mTEC into 15 reproducible subpopulations representing di
226 They also suggest a stepwise process of mTEC development, in which RANK is a master player in co
229 TRAF3 plays a central role in regulation of mTEC development by imposing requirements for SP T cells
230 results identify Sin as a novel regulator of mTEC development and T cell tolerance, and suggest that
232 ollectively, these data provide a roadmap of mTEC development and demonstrate the power of combinator
233 r data, we derived the following sequence of mTEC differentiation: TPA(lo)MHCII(lo) --> TPA(lo)MHCII(
237 as a pathway important in the development of mTECs, because mice lacking RelB, NIK, or IKKalpha, crit
238 findings suggest that the differentiation of mTECs can involve some of the developmental programs use
239 y, Sin deficiency inhibited the expansion of mTECs in response to in vivo administration of keratinoc
240 -dimensional model preserves key features of mTECs: proliferation and terminal differentiation of CD8
241 mited spectrum of TRAs, and the frequency of mTECs that express any individual TRA is quite low (>0.4
242 iven the recently described heterogeneity of mTECs and DCs, it is unclear whether the antigen acquisi
243 it is most important for the maintenance of mTECs in the postnatal thymus, which are in turn necessa
244 that direct proliferation and maturation of mTECs are provided by members of the tumor necrosis fact
245 rget genes was induced in only a minority of mTECs, independently of DNA-methylation patterns, as sma
248 urnover rates in young mice, the turnover of mTECs was more rapid than that of cTECs in adults; and 3
249 of the unusual features of Aire's impact on mTEC transcription, providing molecular insight into tol
251 -restricted pattern of expression, with only mTECs and peripheral extrathymic Aire-expressing cells (
253 red whole-genome gene signatures of purified mTEC subsets from TEC-specific Hipk2 knockout mice with
254 how multiple hemopoietic cell types regulate mTEC development through differential provision of RANKL
258 mparison of the transcriptomes of 174 single mTEC indicates that genes induced by Aire expression are
259 we sequenced transcriptomes of 6,894 single mTEC, enriching for 1,795 rare cells expressing either o
260 How this process is regulated in single mTECs and is coordinated at the population level, such t
262 sion in individual and small pools of sorted mTECs show that mTECs are highly heterogeneous; each ind
263 tudy, in mouse thymus, we analyze late-stage mTEC development in relation to the timing and requireme
264 ily disrupts the integrity of medullary TEC (mTEC) niche, a defect that spreads to the adult cortical
265 fically expressed in Aire(+) medullary TECs (mTECs) induced efficient deletion via direct presentatio
267 d map emphazises close parallels of terminal mTEC development with that of skin, undergoing an altern
269 within the thymus medulla, and it shows that mTEC homeostasis is not a rate-limiting step in intrathy
274 al and small pools of sorted mTECs show that mTECs are highly heterogeneous; each individual mTEC exp
277 RANK(+) subsets that reside within both the mTEC(hi) and mTEC(lo) compartments and that represent di
279 l (Treg) development, and alterations in the mTEC compartment can lead to tolerance breakdown and aut
281 rmacological means increased the size of the mTEC compartment, enhanced negative selection and functi
282 l mimicking the developmental biology of the mTEC lineage has hampered the molecular analysis of the
284 have defined several basic properties of the mTEC population that refine our understanding of these c
285 s altered multiple functional modules of the mTEC transcriptome, including tissue-restricted antigen
286 own that gene-expression patterns within the mTEC compartment are heterogenous and include multiple d
288 sion and terminal differentiation within the mTEC lineage are temporally separable events that are co
291 inism but is 'bookmarked' and stable through mTEC divisions, which ensures more effective presentatio
293 node stromal cells are functionally akin to mTECs and provide a direct strategy for purging the peri
294 Even when TRA expression is restricted to mTECs, DCs still present self-antigens at least as frequ
296 tracing and recovery from transient in vivo mTEC ablation with single-cell RNA-sequencing in Mus mus
299 CD4(+)3(-) cells are closely associated with mTECs in adult thymus, and in fetal thymus their appeara
300 ell development is medullary dependent, with mTECs fostering the generation of Foxp3(-)CD25(+) nTreg