ライフサイエンスコーパス: microbial

1 carbon inputs, but rather by restrictions on microbial access to organic matter in the spatially hete

2 cium carbonate precipitation (MICP) in which microbial activity leads to the formation of calcium car

3 Microbial activity mediates the fluxes of greenhouse gas

4 le in biogeochemical cycles due to extensive microbial activity.

5 Many microbial agents have been implicated as contributors to

6 ese changes were related to sleep and/or gut microbial alpha diversity.

7 inical features, and conduct more definitive microbial analyses using metagenomic shotgun sequencing.

8 s Ia and class II molecules and provide anti-microbial and anti-tumour immunity.

9 brain monitor the intestinal tissue and its microbial and dietary content(1), regulating both physio

10 nstrate the binding of CTRP6 to a variety of microbial and endogenous ligands identifying CTRP6 as a

11 and biological (e.g. plant root growth, soil microbial and faunal activity) mechanisms, their impacts

12 Microbial and plant specialized metabolites constitute a

13 ut microbiome via modulation of immunologic, microbial, and metabolomic profiles in the host.

14 he East Australian Current (EAC), transports microbial assemblages that maintain tropical and oligotr

15 ligands, which increase iron solubility and microbial availability, understanding the processes gove

16 sis that the immunotherapeutic efficacy of a microbial-based stimulus for innate immune mobilization

17 n both a two-chamber microbial fuel cell and microbial battery with a solid-state NaFe(II)Fe(III)(CN)

18 de greater volumetric power density with the microbial battery.

19 xplained 5.7% (q = 0.024) of the variance in microbial beta-diversities.

20 e coralline algae (CCA) and their associated microbial biofilms play important roles in determining t

21 nd liquid transport media) and assessment of microbial bioload (growth conditions, time of growth, sp

22 Treatments without dispersal had lower soil microbial biomass and metabolic diversity but higher bac

23 productivity, resulting in higher amounts of microbial biomass and necromass that translate into the

24 l resting stages might heavily contribute to microbial biomass and thus drive the responsiveness of a

25 actors (e.g. clay, pH, and C availability of microbial biomass C and dissolved organic C) played rela

26 The microbial biomass nitrogen (MBN; total coefficient = 0.1

27 The ratios of microbial biomass to total SOC predicted by MIMICS agree

28 Earth's microbial biosphere extends down through the crust and m

29 lter the stability and functions of the rare microbial biosphere remains unknown.

30 and emphasize the close linkage between soil microbial C and N cycling.

31 nce of Blautia and Lachnoclostridium, higher microbial capacity for bile acid conversion, and low abu

32 owever, the multiple autotrophic pathways of microbial carbon assimilation and fixation in paddy soil

33 The findings enhance the understanding of microbial catabolic diversity during adaptive evolution

34 a low proportion of Faecalibacterium and low microbial cell densities(1,2), and its prevalence varies

35 detection of synthesis products from single microbial cells remains the bottleneck for determining t

36 Among the environmental factors shaping microbial changes of our subjects, significant metadata

37 h conditions, time of growth, specificity of microbial characterization) are barriers to drawing robu

38 Although IFN-gamma typically helps microbial clearance, we found that increased plasma IFN-

39 We can also replicate these IBD microbial co-abundances in longitudinal data from the IB

40 Community analysis with microbial co-occurrence networks points to these three e

41 Conclusion: Fecal microbial colonization from patients with cirrhosis resu

42 track intestinal stem cell lineages and gut microbial colonization in single animals, revealing spat

43 lectively, these data indicate that neonatal microbial colonization of the gut elicits concomitant ef

44 tracellular signaling to limit or facilitate microbial colonization.

45 between the composition and function of gut microbial communities and early-onset calcium oxalate ki

46 gest the ways these metabolites might affect microbial communities and ultimately agricultural produc

47 Root-associated microbial communities are important for maintaining agri

48 There is longstanding interest in studying microbial communities below ground, while little attenti

49 generally higher N(2) -fixation and distinct microbial communities compared to similar treatments in

50 Microbial communities comprised of phototrophs and heter

51 We sampled gut microbial communities from 55 moose in a population expe

52 riation of species presence and abundance in microbial communities from a macroecological standpoint.

53 ed amplicon targeted metagenomics to compare microbial communities from EDC and sputum samples of pat

54 sistent with higher H(2) abundance, sediment microbial communities from the basaltic catchment exhibi

55 ole a gut fungus can play in influencing the microbial communities harbored in an important insect an

56 on the temperature sensitivity of growth of microbial communities in Antarctic soils and in the surr

57 led a greater level of connectedness between microbial communities in the tall cultivars relative to

58 Microbial communities inhabit algae cell surfaces and pr

59 the deep sea, yet little is known about the microbial communities inhabiting these systems.

60 he degree to which spatial variation in soil microbial communities modulates plant species' distribut

61 We found the resident microbial communities not only suppressed growth and col

62 s that infect microorganisms dominate marine microbial communities numerically, with impacts ranging

63 stisphere communities to starkly differ from microbial communities on other inert surfaces, which is

64 Our results show that the microbial communities on PAC (vs.

65 Microbial communities were less diverse among individual

66 n modeling, which showed that plants but not microbial communities were responsible for significantly

67 ting beneficial resident bacteria to growing microbial communities within the GI tract.

68 agenomics of mucosal biopsies to explore the microbial communities' compositions of terminal ileum an

69 sults suggest that soil and activated sludge microbial communities, although certainly different in t

70 for sustained growth of subject-specific gut microbial communities, an ex vivo drug metabolism screen

71 impacts of woody plant encroachment on soil microbial communities, but highlight that multiple bioti

72 acellular peptidases derived from wastewater microbial communities, which is a major impediment for t

73 rstand the functional potential of sequenced microbial communities.

74 wed detecting the subtle variations of local microbial communities.

75 lity to, and/or methylmercury production by, microbial communities.

76 composition of benthic macroinvertebrate and microbial communities.

77 intenance of diverse traits and functions in microbial communities.

78 tly sampling the small intestinal mucosa and microbial community (microbiota).

79 c carbon, abundant Prochlorococcus, and high microbial community alpha diversity.

80 sexual risk category, and gender impact gut microbial community alpha-diversity.

81 r taxa could play a role in the interplay of microbial community and environment across various bloom

82 r another, constitute the central drivers of microbial community assembly.

83 g can establish the functional capacity of a microbial community by cataloging the protein-coding seq

84 Therefore, in a migrating microbial community coexistence of bacteria and phages i

85 Overall microbial community composition and diversity were stron

86 y require years to develop, and consequently microbial community composition may affect methanotrophi

87 n this cohort and associated with changes in microbial community composition.

88 Our goal was to assess the microbial community compositions and metabolic capacity,

89 We examined microbial community dynamics in this population utilizin

90 The gut microbial community exhibited marked spatial variation a

91 The discovery of a diverse microbial community in smectite-rich subsurface layers i

92 f Hg and the composition and activity of the microbial community involved.

93 ny feasible solutions are Nash equilibria of microbial community metabolic models with/without an out

94 ructural and functional characteristics of a microbial community of human deep-dentin carious lesions

95 Here, we report on the chemistry and microbial community of the highly reducing sediment of C

96 omposition, concrete corrosion loss, and the microbial community on the corrosion layer.

97 icantly boost microbial growth; however, the microbial community response has not been fully understo

98 However, belowground microbial community response to drought in temperate mai

99 6S rRNA gene profiling demonstrated that the microbial community was dominated by sulfur oxidising ba

100 In contrast, changes in the microbial community were minor and transient, and very f

101 A high diversity vaginal microbial community with paucity of Lactobacillus specie

102 Here, we designed a simple microbial community with three strains of E. coli that c

103 re more similar to each other in the overall microbial community, compared to low plaque index or low

104 is tools for extracting the CDS content of a microbial community.

105 and gnotobiotic colonizations to define the microbial composition and function in fecal samples obta

106 uantify the association between longitudinal microbial composition and time-to-event outcomes.

107 ation sequencing to evaluate the subgingival microbial composition of young patients with severe peri

108 The fecal microbial composition was analyzed by Genetic Analysis G

109 and Main Results: An increased similarity of microbial composition was found between MWF samples and

110 used 16S rRNA gene amplicons to evaluate how microbial compositions shift in response to exposure of

111 e net difference (~2 x 10(12) mol H(2)/y) to microbial consumption in order to balance the H(2) budge

112 meat samples were periodically analysed for microbial count, chemical stability (pH, lipid oxidation

113 In other words, sulfide likely disrupted microbial cross-feeding between AOB and NOB and induced

114 gs are variable among patients with negative microbial culture results after completing a standard re

115 general aspects on the safety assessment of microbial cultures have been suggested, no methodologica

116 rwise demonstrated no difference in positive microbial cultures or adverse events.

117 the yield of diagnostic evaluation including microbial cultures over a 6.5 year period at an academic

118 Microbial cure following doxycycline-azithromycin was 95

119 der nutrient limitation and to resistance to microbial decomposition.

120 innate immune system and plays a key role in microbial defense, inflammation, organ development, and

121 emodeling factor has a distinct role in anti-microbial defense.

122 expression of IL1beta in vivo was driven by microbial-dependent activation of toll-like receptor 4 (

123 s will help efforts towards the discovery of microbial-derived repellent/oviposition-deterrent compou

124 tion, but we find no evidence for a distinct microbial diagnostic signature, probably due to heteroge

125 ehaviors predicted to increase mother-infant microbial dispersal.

126 standing of the formation and maintenance of microbial diversity along elevation, as well as microbia

127 eginning to grasp the drivers of terrestrial microbial diversity and biogeography, which presents a s

128 nts were cervical T cell activation, vaginal microbial diversity and cytokine concentrations.

129 Dispersal is now recognized as a driver of microbial diversity and function, but our understanding

130 es richness, and that TCS further diminished microbial diversity and shifted the bacterial community

131 Despite the remarkable microbial diversity found within humans, our ability to

132 During dupilumab treatment, microbial diversity increased and the abundance of S. au

133 Microbial diversity increased in parallel with the sever

134 Most eukaryotic microbial diversity is uncultivated, under-studied and l

135 growth, little is known about the impact of microbial diversity on plant fitness trade-offs, intrasp

136 indicate no clear link between coral age and microbial diversity or richness.

137 intestinal barriers as important sources of microbial DNA in the CNS, opening novel opportunities fo

138 mline-encoded innate immune receptors detect microbial DNA in various compartments of the cell, such

139 Our findings indicate that microbial DNA may play a previously overlooked role in t

140 Sensing of microbial DNA through these receptors stimulates, in mos

141 This points to the potential importance of microbial dormancy and resting stages in the formation o

142 an opportunity to discover new ways to treat microbial-driven diseases.

143 considering the looming crisis of widespread microbial drug resistance it is an attractive target.

144 ted by the need to precisely control complex microbial dynamics in spatially extended environments, r

145 downstream anorexia as driver mechanisms of microbial dysbiosis after infection with a fast-spreadin

146 Microbial dysbiosis is associated with alcohol-related h

147 PAgs can be microbial [(E)-4-hydroxy-3-methyl-but-2-enyl pyrophospha

148 seline available for interrogation by future microbial ecology studies.

149 highlight the promise of minimal models for microbial ecology.

150 ta exist on a healthy maturation of the oral microbial ecosystem in children.

151 Some of the densest microbial ecosystems in nature thrive within the intesti

152 and much of the subsurface, including those microbial ecosystems located within cave systems.

153 anisms to communicate with each other within microbial ecosystems.

154 Consequently, microbial electrochemical sensors (MESe) are currently b

155 For microbial electrochemical technologies to be successful

156 Microbial elevational diversity patterns have been exten

157 otif (LysM) receptors to recognize and parse microbial elicitors and drive intracellular signaling to

158 d genes mediating their interaction with the microbial environment.

159 ic polysaccharide monooxygenases (LPMOs) are microbial enzymes secreted by fungal saprotrophs involve

160 um conference, "Origins of allergic disease: Microbial, epithelial and immune interactions" were to p

161 tions" were to present and discuss potential microbial-epithelial-immune interactions underlying the

162 Microbial exopolysaccharides (EPSs) exhibit diverse func

163 a has horizontally acquired an operon with a microbial expansin (exlx) gene adjacent to a glycoside h

164 fungal wilt-inducing pathogens suggests that microbial expansin proteins may be an under-appreciated

165 othesis-could relate to differences in early microbial exposures.

166 ults demonstrate that AQDS and NOM can drive microbial Fe(III) reduction across 2 cm distances and sh

167 e, propionate, and butyrate) are produced by microbial fermentation of fiber in the colon.

168 mass-derived sugars can also be supplied for microbial fermentative processing to fuels and chemicals

169 ormation from isolated bacteria, metagenomic microbial findings from primary specimens, mass spectra

170 In such cases, microbial fitness is enhanced by the evolution of antici

171 t only restoring cutaneous barrier function, microbial flora, and immune homeostasis but also enhanci

172 ions: demethylation channels sulfur into the microbial food web, whereas cleavage releases sulfur int

173 balance between host-mediated responses and microbial forces.

174 e hard-wired bioanodes in both a two-chamber microbial fuel cell and microbial battery with a solid-s

175 rse microbiomes to gain deeper insights into microbial functioning and lifestyles.

176 Predicted microbial functions were also impacted and network analy

177 The most proportionally abundant microbial genera were Mycobacterium and Achromobacter at

178 ic gene clusters (BGCs) are operonic sets of microbial genes that synthesize specialized metabolites

179 ut presently under-utilized ways to identify microbial genes underlying differences in community comp

180 n of fecal SCFAs, bile acids, and functional microbial genes.

181 tunities for investigation of AMR across all microbial genomes in a sample (i.e. the metagenome).

182 al scaling to accommodate constantly growing microbial genomic data.

183 he legacy of Linnaeus lives on in the age of microbial genomics and metagenomics, we propose an autom

184 Our results demonstrate that specific microbial groups are not only able to survive unfavorabl

185 e) and prokaryotes (bacteria and archaea), 2 microbial groups that play a major role in the global ca

186 We suggest that PSR favors faster rates of microbial growth and turnover, likely due to greater pla

187 he pool of aromatic compounds that supported microbial growth in the dark treatment, ultimately causi

188 This microbial growth occurs despite unfavourable conditions

189 re fermented by different methods and pH and microbial growth, volatile compounds, protein profile, a

190 ave been demonstrated to significantly boost microbial growth; however, the microbial community respo

191 occus lactis Protein production in these two microbial hosts was enhanced by codon optimization and t

192 h-level Taxol production in cell cultures or microbial hosts.

193 ses against opportunistic bacteria to combat microbial incursion and maintain host homeostatic balanc

194 es) mediates protective cellular response to microbial infection and tissue damage, but its aberrant

195 between plants and microbes, the control of microbial infection of plant cells, the control of plant

196 s are important for immune responses against microbial infections.

197 and abundant, relatively well-characterized microbial inhabitants presents an opportunity to investi

198 Plant-microbial interactions in the rhizosphere are an essenti

199 atory drugs as important areas for assessing microbial interactions with the nervous system.

200 U speciation can be governed by microbial interactions, whereby metal-reducing bacteria

201 phylococcus aureus carriage in patients with microbial keratitis (MK).

202 Patients with microbial keratitis, who were older and pseudophakic, we

203 nd dry eye were key predisposing factors for microbial keratitis.

204 cently become apparent that the diversity of microbial life extends far below the species level to th

205 Macrophages respond to microbial ligands and various noxious cues by initiating

206 electivity of gene activation in response to microbial ligands; however, these studies do not reflect

207 effect with a variety of preparation types, microbial lineages and isotope labels to determine its c

208 r of periodontitis, has been proposed as the microbial link underlying this association.

209 Recent studies have shown microbial lipids to be sensitive and selective biomarker

210 R despite both rat strains having equivalent microbial loads within the placenta.

211 ling and assess the metabolic functioning of microbial mats using an isotope geochemistry approach.

212 significant degree of flexibility to tailor microbial membranes to meet specific needs.

213 epithelial host responses intersect with gut microbial metabolism in the context of gut inflammation.

214 vestigate metabolic differences between oral microbial metabolism of endogenous (i.e., salivary prote

215 ex polyketides are typically associated with microbial metabolism.

216 These examples underscore the opinion that microbial metabolite mimicry of promiscuous ligand-recep

217 More importantly, 29% extracted microbial metabolites have not been captured by existing

218 link to CVD for these and other specific gut microbial metabolites/pathways has been shown through nu

219 nections may be mediated by an assortment of microbial molecules that are produced in the gastrointes

220 model that tracks the community dynamics of microbial mutualists, pathogens, and their plant hosts.

221 E as a part of future screening workflows of microbial natural products.

222 Here, we combine datasets, including microbial necromass biomarker amino sugars and SOC, from

223 anced by plant diversity was estimated to be microbial necromass C, and >76% of the additional SOC en

224 nnual to perennial crops was estimated to be microbial necromass.

225 However, in a diseased state, host-microbial networks lead to dysbiosis and considerable bu

226 Estimation (COZINE) method for inference of microbial networks which addresses these critical aspect

227 Detection of microbial nucleic acids in body fluids has become the pr

228 otal) solely using plasma-derived, cell-free microbial nucleic acids.

229 the collective DNA sequencing of coexisting microbial organisms in an environmental sample or a host

230 Microbial parameters had similar explanatory power as ch

231 er suitability and soil's physiochemical and microbial parameters of its cultivation sites.

232 2-nitro-1-propanol (NP)] against 5 different microbial pathogens including two antibiotic-resistant s

233 o managing such infections since both direct microbial pathogens killing and matrix stabilization can

234 nus is required for hGBP1's activity against microbial pathogens, as well as for its antiproliferativ

235 for vaccine development against flagellated microbial pathogens.

236 rectly from next generation sequence data of microbial pathogens.

237 acilitating a rapid inflammatory response to microbial pathogens.

238 ulation genomes showed that these endolithic microbial populations encoded potential pathways for ano

239 city and niche complementarity in oleaginous microbial populations from a biological wastewater treat

240 e more copiotrophic (r-strategist) temperate microbial populations within temperate latitudes of the

241 ted understanding of normal small intestinal microbial populations-progress in sampling technology an

242 iation and expands the adaptive potential of microbial populations.

243 % of infant-colonizing microbes, but explain microbial prevalence less well in adults from river vill

244 in the rhizosphere, such as root exudation, microbial processes, and soil organic matter stabilizati

245 In particular, many photoproducts and some microbial products were identified as potential precurso

246 a number of DNA detection methods including microbial profiling and may advance the utility of dPCR

247 ber of a superfamily comprising thousands of microbial proteins.

248 g solution on the chemical, nutritional, and microbial quality of wheat grain during 14 days of germi

249 Microbial reduction of soluble selenium (Se) or telluriu

250 findings expand our fundamental knowledge of microbial reductive dehalogenation and warrant further s

251 Here, we discuss microbial regulation of short-chain fatty acids, neurotr

252 suggest that lifetime trajectories of human-microbial relationships could differ from those of our c

253 eptococcus and Actinomyces are key potential microbial reservoirs of macrolide resistance including t

254 Our data suggest that the mechanisms driving microbial residue responses to increased N and P availab

255 Soil microbial residues may not only affect soil organic carb

256 he P-induced decrease in the contribution of microbial residues might be unfavorable for the stabilit

257 Soil microbial respiration is an important source of uncertai

258 er winter soils are thought to yield greater microbial respiration of available C, greater overwinter

259 can lead to labile C starvation and reduced microbial respiration, despite the high C content of mos

260 anic matter (SOM), thereby reducing rates of microbial respiration.

261 ers different contributions to variations in microbial responses and immune cell composition.

262 robial diversity along elevation, as well as microbial responses to climate change in montane ecosyst

263 at natural aerial dispersal rate alters soil microbial responses to disturbance.

264 Microbial resting stages might heavily contribute to mic

265 hat woody plant encroachment influenced soil microbial richness and community composition across site

266 Dermotype B was characterized by reduced microbial richness, depletion of Cutibacterium acnes, De

267 Quantitative microbial risk assessment (QMRA) is a tool to evaluate t

268 an E. coli recording strain is exposed to a microbial sample and spacers are acquired from transferr

269 Microbial samples were analyzed with 16S amplicon sequen

270 low volume suction, or none), the methods of microbial sampling (petri dishes with solid media, filte

271 Microbial secondary metabolism is a reservoir of bioacti

272 ime consuming and they do not consider novel microbial sequences when aligned with the reference geno

273 Given the increased accessibility of microbial sequencing platforms, many recent studies have

274 ive hormone concentrations contribute to gut microbial shifts during pregnancy.

275 Biome analyses can be used to identify novel microbial signatures associated with diabetes and suppor

276 Numerous microbial species can selectively precipitate mineral ca

277 Here, we (co)evolved five microbial species in replicate polycultures and monocult

278 Assessing the metabolic roles of individual microbial species in syntrophic communities remains a ch

279 irst, the specificity was verified using all microbial species reported to produce FE.

280 tion depends on the correct selection of the microbial species used as the stimulant and its relation

281 mal growth temperature (OGT) for every known microbial species, organisms adapted to different temper

282 t on Mn(II) oxidation to a co-culture of two microbial species.

283 he number of colony-forming units (CFUs) and microbial species.

284 rs and higher alcohols) may be indicative of microbial spoilage.

285 ucing capacity of a diverse set of human gut microbial strains by monocolonizing mice with each strai

286 idence from both fecal and mucosa-associated microbial studies that patients with PSC harbor an abnor

287 Unwetted material powders and microbial swab samples were analyzed using reverse phase

288 Studying the distribution of microbial taxa and genes across plant habitats has revea

289 equently ignore evolutionary relations among microbial taxa, potential relations between modulating f

290 marizes the compendial and alternative rapid microbial test methods available for product sterility a

291 ersification of this class of promising anti-microbial therapeutics in heterologous systems.

292 ltered survival and increased sensitivity to microbial toxin, osmotic and oxidative stress are seen i

293 is was able to estimate associations between microbial traits and disease (including Bifidobacterium

294 -based genomic information into a catalog of microbial traits.

295 The relationship between gut integrity, microbial translocation, and inflammation in PHIV is poo

296 etabolites that can be transferred via fecal microbial transplant into mice is identified.

297 ished nanoSIMS datasets and revise estimated microbial turnover times in the marine subsurface and ni

298 ant, soil, and human systems have shown that microbial volatiles can mediate microbe-microbe or micro

299 and the atmosphere and thus the climate, the microbial world is bound to change and adapt as well.

300 ange of functional roles particularly in the microbial world.