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1 mtDNA can be profiled along with measures of cell state,
2 mtDNA depletion and cytochrome c oxidase-negative cells
3 mtDNA was recognized by the DNA sensor cGAS and generate
5 mitochondrial DNA (mtDNA) although aberrant mtDNA rNMP content has been identified in disease models
9 f rNMPs did not, however, appreciably affect mtDNA copy number or the levels of mtDNA molecules with
12 cal changes in recipient cells shortly after mtDNA transfer, but the long-term retention and function
13 d suggest little purifying selection against mtDNA deletions by mitophagy in postmitotic muscle fiber
14 e loss of mitochondrial activity and altered mtDNA copy number that result in organ dysfunction in ag
15 tween germline and somatic tissues and among mtDNA regions, suggestive of distinct mutagenesis mechan
20 r mitochondrial copy numbers were lower, and mtDNA and Rac1 promoter DNA methylation was exacerbated.
21 served deletion patterns are best modeled as mtDNA deletions initiated by replication fork stalling d
23 We used DdCBEs to model a disease-associated mtDNA mutation in human cells, resulting in changes in r
24 methylation, which contributes to attenuated mtDNA transcription and a reduced mtDNA copy number.
25 Mitochondrial membrane protein p32 can block mtDNA synthesis by restricting RECQ4 mitochondrial local
26 DEC205 is a transmembrane protein that bound mtDNA and contributed to pattern recognition by Toll-lik
28 rial DNA (mtDNA) replication machinery cause mtDNA depletion syndromes (MDSs), which associate ocular
31 d a detailed protocol optimized for both ccf-mtDNA and ccf-nDNA recovery that uses a magnetic bead-ba
34 d efficiency of recovery of ~95-fold for ccf-mtDNA and 20-fold for ccf-nDNA when compared with the in
35 t high-throughput approach optimized for ccf-mtDNA and ccf-nDNA recovery and serves as an important s
36 ayed plate edge effects resulting in low ccf-mtDNA reproducibility, whereas ccf-nDNA was less affecte
39 ortunity to poison proliferating cancer cell mtDNA replication as certain cancers rely heavily on mit
41 etes patients had similar levels of cellular mtDNA compared to healthy participants but a significant
47 al blood and a surprisingly high level of cf mtDNA was present in serum and plasma of HC, with no dir
49 t African (Acinonyx jubatus jubatus) cheetah mtDNA diverged approximately 72 kya, while the Southeast
50 t the most recent common ancestor of cheetah mtDNA is approximately twice as ancient as currently rec
51 hips by studying larger fragments of cheetah mtDNA, both from an Indian cheetah museum specimen and t
54 dative phosphorylation deficiency for common mtDNA variants and nuclear-encoded complex I variants an
55 on led to a reduced efficiency in completing mtDNA synthesis due to unresolved RNA:DNA hybrids across
56 ion can be explained by complex concatenated mtDNA-derived sequences rearranged within the nuclear ge
57 seq), a method that combines high-confidence mtDNA mutation calling in thousands of single cells with
65 h in Saccharomyces cerevisiae, we determined mtDNA-to-nuclear DNA ratios in 5148 strains lacking none
69 d analysis of nuclear and mitochondrial DNA (mtDNA) allows rapid diagnosis for the vast majority of p
70 of rNMPs is tolerated in mitochondrial DNA (mtDNA) although aberrant mtDNA rNMP content has been ide
71 lly acquired mutations in mitochondrial DNA (mtDNA) and consecutive respiratory chain dysfunction as
72 rradiation caused greater mitochondrial DNA (mtDNA) and nuclear DNA (nDNA) damage in female mice, ind
77 cation and segregation of mitochondrial DNA (mtDNA) creates the potential for evolutionary conflict d
78 K2 G2019S mutation causes mitochondrial DNA (mtDNA) damage and is LRRK2 kinase activity-dependent.
80 antation, associated with mitochondrial DNA (mtDNA) depletion without accumulation of multiple deleti
81 ncy, de novo mutations in mitochondrial DNA (mtDNA) directly from oocytes and from somatic tissues (b
84 d the association between mitochondrial DNA (mtDNA) haplogroups and the homeostatic model assessments
86 ile analysis of 139 bp of mitochondrial DNA (mtDNA) has confirmed that the Indian cheetah was part of
89 Precise gene editing of mitochondrial DNA (mtDNA) is essential for the generation of model systems
90 tion the dogma that human mitochondrial DNA (mtDNA) is inherited exclusively down the maternal line,
92 ociated with one of three mitochondrial DNA (mtDNA) m.3460G>A, m.11778G>A and m.14484T>C mutations.
99 homeostasis, resulting in mitochondrial DNA (mtDNA) release and activation of cytosolic DNA-mediated
100 ondrial pores and induced mitochondrial DNA (mtDNA) release into the cytosol of endothelial cells.
101 f the molecular events in mitochondrial DNA (mtDNA) replication is crucial to understanding the origi
102 ncoding components of the mitochondrial DNA (mtDNA) replication machinery cause mtDNA depletion syndr
105 e genome sequencing, deep mitochondrial DNA (mtDNA) sequencing, and tested for mitochondrial deletion
107 Here, we investigated the mitochondrial DNA (mtDNA) variation of 545 present-day Umbrians (with 198 e
108 -generation sequencing of mitochondrial DNA (mtDNA) was performed for 6 affected family members.
111 the maternally inherited mitochondrial DNA (mtDNA), known to be highly informative for human ancestr
117 roplasmic mutation in the mitochondrial DNA (mtDNA; m.3243A > G) at heteroplasmy levels of ~50 to 90%
118 is common in angiosperm mitochondrial DNAs (mtDNAs), few cases of functional foreign genes have been
120 del(A420-A463) mutant, it failed to enhance mtDNA synthesis due to the accumulation of RNA:DNA hybri
121 conomical and generalized methods for entire mtDNA genome enrichment prior to high-throughput sequenc
124 tribution of the H4a1 haplogroup in existing mtDNA, thus creating a baseline for future occurrences o
125 g uridine-free selection, although exogenous mtDNA is lost from metabolically impaired, mtDNA-intact
126 Uncovering factors that stabilize exogenous mtDNA integration will improve our understanding of in v
129 1 during RGC differentiation is critical for mtDNA maintenance to produce appropriate optic nerve con
130 Q4 is a DNA replication factor important for mtDNA maintenance, and here, we unveil a role of human R
133 -reactive protein, and circulating cell-free mtDNA in serum of 245 participants in two cohorts from t
134 r, the role of IL6 and circulating cell-free mtDNA in unaffected and affected individuals harbouring
135 levels; and (iv) that circulating cell-free mtDNA levels have good predictive potential to discrimin
136 in PRKN/PINK1, IL6 and circulating cell-free mtDNA levels may serve as markers of Parkinson's disease
137 tions; (iii) increased circulating cell-free mtDNA serum levels in both patients with biallelic or wi
139 xtent variation in the mitochondrial genome (mtDNA) contributes to the biological heterogeneity obser
142 iferating and differentiated HepaRG harbored mtDNA levels of 0.9% and 17.9% compared with control cel
144 significant between groups with low and high mtDNA copy number (P < 0.001 and 0.002, respectively).
147 ximal and distal tubules had markedly higher mtDNA levels compared with cells within glomeruli and co
148 itochondrial membrane potential, with higher mtDNA release in brain and primary cerebro-cortical neur
149 ids within the mitochondrial matrix, but how mtDNA nucleoids are formed and regulated within cells re
152 hat catalyse C*G-to-T*A conversions in human mtDNA with high target specificity and product purity.
153 nt concern that toxicants such as ddC impair mtDNA maintenance in both proliferating and nonprolifera
156 ecies of mitochondrial (mt-)tRNAs encoded in mtDNA translate essential subunits of the respiratory ch
157 cant mean increase of 48.2- and 86.1-fold in mtDNA based on quantitative PCR, and proportion of subse
159 se deletion resulted in a marked increase in mtDNA levels, while maintaining wild type-like mitochond
162 and the discovery of pathogenic mutations in mtDNA more than 30 years ago, a movement towards generat
164 newly introduced mtDNA is stably retained in mtDNA-deficient (rho0) recipient cells following uridine
165 w that the Balbiani body has a minor role in mtDNA selective inheritance by supplying healthy mitocho
166 that Huntington's disease mice had increased mtDNA release, cGAS activation, and inflammation, all in
174 ents of the built environment with leukocyte mtDNA copy number among 5,502 Mexican American adults en
175 quantitative analysis of three primary LHON mtDNA mutations, offering a promising approach for genet
179 yers which mediate the degradation of linear mtDNA fragments and possible mechanisms of recirculariza
182 the study population was stratified into low mtDNA copy number group (< median) and high mtDNA copy n
185 elopments in the transformation of mammalian mtDNA have stood still for some time, recent demonstrati
187 ive mammalian methyltransferase, can mediate mtDNA 6mA methylation, which contributes to attenuated m
188 mismatched nuclear (nDNA) and mitochondrial (mtDNA) genomes retained transferred mtDNA, which replace
189 l mystery that may pose challenges to modern mtDNA disease therapies, leading to substantial recent a
190 Most, if not all, humans contain multiple mtDNA genotypes (heteroplasmy); specific patterns of var
193 this adaptation, rho(0) cells, which have no mtDNA, exhibit increased growth rates and nuclear genome
196 Comparison to a more recent O. nubilalis mtDNA assembly from unenriched short-read data analogous
201 studied as a disease biomarker, comprises of mtDNA located within mitochondria, indicative of mitocho
209 ion of mtDNA, rather than the elimination of mtDNA copies that results from its cleavage by targeted
210 cuss the current knowledge about the fate of mtDNA following double-strand breaks, including the mole
214 chondrial fission, together with the lack of mtDNA replication, segregate mtDNA into individual organ
216 fold increased odds of having high levels of mtDNA copy number [Odds ratio (OR) = 1.24, 95% confidenc
217 /intersection ratio) may influence levels of mtDNA copy number in leukocytes in Mexican Americans.
219 ly affect mtDNA copy number or the levels of mtDNA molecules with deletions or strand breaks in aged
220 ized self-renewing tissues, higher levels of mtDNA were observed in stem/proliferative compartments c
222 enerating methods for robust manipulation of mtDNA has ensued, although with relatively few advances
223 nology suggest that clinical manipulation of mtDNA heteroplasmy may be on the horizon for these large
225 ee DdCBEs enable the precise manipulation of mtDNA, rather than the elimination of mtDNA copies that
226 explored the possibility that measurement of mtDNA damage is a "surrogate" for LRRK2 kinase activity
229 lian cells could generate improved models of mtDNA disease and support future cell-based therapies.
233 LRRK2 kinase inhibitors, a full reversal of mtDNA damage to healthy control levels was observed and
235 Manipulation of the amount and sequence of mtDNA within cells is important experimentally and for d
237 dings cast light on the origin and spread of mtDNA mutations at multiple scales, from the organelle t
240 que, not only to prevent the transmission of mtDNA mutations, but also as a new potential treatment f
243 ve stress induced high mutation frequency on mtDNA can be indirectly caused by oxidation of the mitoc
245 stigated the effect of incorporated rNMPs on mtDNA stability over the mouse life span and found that
247 e penetrance and tissue specificity of other mtDNA mutations and highlight the potential role of amin
249 e cryptic mega-NUMTs can resemble paternally mtDNA heteroplasmy, but find no evidence of paternal tra
250 ll variation in heteroplasmy of a pathologic mtDNA variant, which we associate with intra-individual
251 a correlation between whole blood and plasma mtDNA levels, indicating that the relationship between c
253 n therapy for advanced PCa, further promoted mtDNA secretion in cultured epithelia, mice, and PCa pat
259 ith the lack of mtDNA replication, segregate mtDNA into individual organelles in the Drosophila early
262 We find that the proliferation of selfish mtDNA within hosts depends on nutrient status stimulatin
266 quantifying species- and cell-type-specific mtDNA copy number and dynamics in any normal or diseased
267 es, little is known about cell-type-specific mtDNA copy number heterogeneity in normal physiology, ag
269 ion due to impaired mitophagy and subsequent mtDNA release in the pathogenesis of PRKN/PINK1-linked P
274 xel and C3 receptor antagonist disrupted the mtDNA/C3a paracrine loop and restored docetaxel sensitiv
278 opose the stability of G-quadruplexes in the mtDNA control region, influencing the balance between tr
280 polymerase gamma is a core component of the mtDNA replisome and the only replicative DNA polymerase
281 tracts (totaling almost 100 kb, ~ 14% of the mtDNA), including 12 intact genes, were acquired by HGT
286 ies of cellular and tissue-wide responses to mtDNA damage and mito-nuclear genome incompatibility.
290 ondrial (mtDNA) genomes retained transferred mtDNA, which replaced the endogenous mutant mtDNA and im
292 nging from New Hampshire to Florida and used mtDNA, three nuclear genetic loci, and incorporated Baye
295 g ddC exposures, we measured cell viability, mtDNA copy number, and mitochondrial bioenergetics utili
296 the holoparasite Lophophytum mirabile, whose mtDNA has lost most native genes but contains intact for
298 nstrate that Mrx6 partially colocalizes with mtDNA within mitochondria and interacts with the conserv
299 d from injured hepatocyte mitochondria (with mtDNA as major active component) directly activate hepat