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1 hat Scm3 plays an active role in centromeric nucleosome assembly.
2 , and the 26S proteasome generally, in plant nucleosome assembly.
3 tin and the proteins required for new CENP-A nucleosome assembly.
4 eosomes, while the reverse reaction promotes nucleosome assembly.
5 h the regulation of gene expression and H3.3 nucleosome assembly.
6 Rtt109, the H3 lysine 56 KAT, to promote RC nucleosome assembly.
7 to CAF-1, a histone chaperone involved in RC nucleosome assembly.
8 n of the N-terminal residues of H3 and H4 in nucleosome assembly.
9 ces of genome-scale, replication-independent nucleosome assembly.
10 leosome positioning sequences favored during nucleosome assembly.
11 stent with their role in replication-related nucleosome assembly.
12 passage, in this case by promoting efficient nucleosome assembly.
13 t, the substrate for replication-independent nucleosome assembly.
14 CAT interruptions in (CAG)n tracts decreased nucleosome assembly.
15 required for efficient DNA synthesis-coupled nucleosome assembly.
16 storage, sperm chromatin decondensation, and nucleosome assembly.
17 H3 or H4 is required for replication-coupled nucleosome assembly.
18 ot equalCG in terms of facilitating archaeal nucleosome assembly.
19 interphase centromeres to promote new CENP-A nucleosome assembly.
20 hromatin assembly factor-1 (CAF-1)-dependent nucleosome assembly.
21 in egg extract under conditions that titrate nucleosome assembly.
22 nized these lysines in yeast and assayed for nucleosome assembly.
23 ent human H4 is therefore completed prior to nucleosome assembly.
24 one acetylation conferred by yCAF-I-mediated nucleosome assembly.
25 leosomal loop of DNA, suggesting a means for nucleosome assembly.
26 e most favored DNA sequences yet defined for nucleosome assembly.
27 e re-establishes both cellular viability and nucleosome assembly.
28 AgNCs did not affect nuclear membrane or nucleosome assembly.
29 hosphorylation for histone H3-H4 binding and nucleosome assembly.
30 as they are transported into the nucleus for nucleosome assembly.
31 responsible for histone H3/H4 deposition and nucleosome assembly.
32 s only moderate effects on H3-H4 binding and nucleosome assembly.
33 way, and enters the nucleus where it impedes nucleosome assembly.
34 AF-1*H3-H4 binding mode and the mechanism of nucleosome assembly.
35 nes to regulate the thermodynamic process of nucleosome assembly.
36 anded DNA, has a role in replication-coupled nucleosome assembly.
37 for FACT to deposit histones onto DNA during nucleosome assembly.
38 H3-H4)2 tetramers during replication-coupled nucleosome assembly.
39 nvolved in the nuclear import of H2A-H2B and nucleosome assembly.
40 in interphase, resulting in defective CENP-A nucleosome assembly.
41 tion itself does not directly interfere with nucleosome assembly.
42 formation of the HIRA-H3.3 complex and H3.3 nucleosome assembly.
43 rlying Nap1-mediated H2A-H2B chaperoning and nucleosome assembly.
44 sis for Nap1-mediated H2A-H2B deposition and nucleosome assembly.
45 ith the DNA replication forks and subsequent nucleosome assembly.
46 a cells depends on the function of Rtt106 in nucleosome assembly.
47 Modification of histones H3 and H4 prevented nucleosome assembly.
48 PCNA unloading is delayed in the absence of nucleosome assembly.
49 intain opportunity for CAF-1 recruitment and nucleosome assembly.
50 ependent on new histone supply and efficient nucleosome assembly.
51 are then transferred to other chaperones for nucleosome assembly.
52 re and gene expression are both regulated by nucleosome assembly.
53 en histone acetylation and ubiquitylation in nucleosome assembly.
54 osed to function in replication-coupled (RC) nucleosome assembly, a process critical for the inherita
55 he absence of DNA replication and stimulated nucleosome assembly activity by recombinant yeast CAF-I
56 defective for PCNA binding displayed reduced nucleosome assembly activity in vitro but were stimulate
59 tion is to recruit HJURP and that the CENP-A nucleosome assembly activity of HJURP is responsible for
64 ex, a histone chaperone that is required for nucleosome assembly after DNA replication, in the wing i
65 ncluding K14 also delayed replication-depend nucleosome assembly and advanced replicative life span.
66 14,000) host genes probed, comprising mainly nucleosome assembly and binding, central nervous system
68 etrameric state can be used as substrates in nucleosome assembly and chaperone-mediated lysine acetyl
70 1 in H2A/H2B deposition and exchange, during nucleosome assembly and chromatin remodeling in vivo.
71 functional distinction between ATP-dependent nucleosome assembly and chromatin remodeling, and sugges
72 roteins that are central to the processes of nucleosome assembly and disassembly and thus the fluidit
73 nstration of the dynamic equilibrium between nucleosome assembly and disassembly at the single chroma
74 on during Pol II elongation, suggesting that nucleosome assembly and disassembly occur in a stepwise
82 itates Chromatin Transcription) functions in nucleosome assembly and H2A-H2B deposition during transc
83 rk for understanding how Vps75 mediates both nucleosome assembly and histone acetylation by Rtt109.
86 DNA-binding) proteins regulate ATP-dependent nucleosome assembly and mobilization through their conse
87 vitro but, surprisingly, is dispensable for nucleosome assembly and only makes a modest contribution
88 of CGG repeat expansion and methylation for nucleosome assembly and positioning on the Fragile X Men
90 uitylated by the Rtt101(Mms1) ligase impairs nucleosome assembly and promotes Asf1-H3 interactions.
91 ed important roles of Dhx15 in chromatin and nucleosome assembly and regulation of the Mdm2-p53 pathw
92 complex and regulated process that includes nucleosome assembly and remodeling, deposition of histon
93 egulate HIRA-H3.3 complex formation and H3.3 nucleosome assembly and reveal the mechanism by which OG
94 dea that the effects of the spt mutations on nucleosome assembly and/or stability activate repressors
95 odifications that accompany DNA replication, nucleosome assembly, and H2A/H2B exchange were examined
96 ing mobile and nonmobile chaperones, de novo nucleosome assembly, and read-write mechanisms that modi
97 nucleosomes, the machinery that accomplishes nucleosome assembly, and the functional organization of
98 ults also indicate that the slowest steps in nucleosome assembly are DNA termini wrapping and tetrame
103 To understand differences in centromeric nucleosome assembly between K. lactis and S. cerevisiae,
104 ASF1b to facilitate DNA replication-coupled nucleosome assembly, but how TLKs selectively target the
105 e that H3.3-specific residues involved in RI nucleosome assembly-but not major histone modification s
109 NAPs have been reported to have a role in nucleosome assembly, cell cycle regulation, cell prolife
110 s, both interruptions permit a propensity of nucleosome assembly closer to that of random (geneticall
111 expression is Yki-dependent, suggesting that nucleosome assembly competes with Yki for pathway target
114 es were found to direct a similar pattern of nucleosome assembly, consistent with the view that nucle
115 ere with Nap1 oligomerization exhibit severe nucleosome assembly defects showing that oligomerization
118 simple, intrinsically stochastic process of nucleosome assembly, disassembly, and position-specific
119 to a simple model involving a noncooperative nucleosome assembly/disassembly equilibrium, suggesting
121 amic packaging of the genome by carrying out nucleosome assembly/disassembly, histone exchange, and n
122 ific enrichment in functions associated with nucleosome assembly, DNA repair, metal ion binding, and
125 H3, has been implicated in the regulation of nucleosome assembly during DNA replication and repair, a
126 ative system could communicate the degree of nucleosome assembly during DNA replication and the need
127 uggesting that FACT and Ubp10 may coordinate nucleosome assembly during DNA replication and transcrip
131 lated at lysine 56 (H3K56ac) and facilitates nucleosome assembly during several molecular processes.
132 d biochemically tractable when compared with nucleosome assembly during simian virus 40 (SV40) DNA re
133 sstalk between MMR and replication-dependent nucleosome assembly during the correction of DNA replica
134 mbedded centromeres by blocking conventional nucleosome assembly early in S phase, thereby allowing t
135 t the GAA GAA TTC triplex further lowers the nucleosome assembly efficiency (82% decrease compared to
136 lly similar functions of H2B ubiquitylation (nucleosome assembly) elicit different functional outcome
139 replication initiation factor, securin gene, nucleosome assembly factor, and a subunit of the cohesin
140 show that Scm3 functions as a Cse4-specific nucleosome assembly factor, and that the resulting octam
143 teract with multiple DNA replication-coupled nucleosome assembly factors, including Rtt106, CAF-1, an
146 endent manner but is also capable of de novo nucleosome assembly from histone octamer because of its
147 ly-distributed nucleosomes are formed by the nucleosome assembly function of Chd1, and then regularly
148 the nucleosome core particles nor displayed nucleosome assembly function, suggesting it may not be d
152 nt protein regulates DNA replication-coupled nucleosome assembly in part through regulating histone-h
153 play an important but redundant function in nucleosome assembly in the budding yeast, Saccharomyces
154 ed understanding of the factors that mediate nucleosome assembly in the nascent male pronucleus, the
155 ng to the results, CpG methylation expedites nucleosome assembly in the presence of abundant DNA and
158 reased expression of histones or a defect in nucleosome assembly in the yeast Saccharomyces cerevisia
159 similar to NAP-1, NLP, and Nph, facilitates nucleosome assembly in vitro and is therefore a histone
160 ional and rotational positioning of archaeal nucleosome assembly in vitro by a sequence from the 7S R
161 al region of yNAP1, although dispensable for nucleosome assembly in vitro, contributes to binding via
167 The histone H4 mutants are competent for nucleosome assembly in vivo, and the residues that are a
170 e results demonstrate that Gcn5 regulates RC nucleosome assembly, in part, by promoting H3 associatio
171 ctural components of H3 and H4 necessary for nucleosome assembly into metazoan chromosomes in vivo.
175 one chaperones have been identified, but how nucleosome assembly is coupled to DNA replication remain
178 Our results reveal that replication-coupled nucleosome assembly is necessary to generate a bilateral
181 transcription initiation, on which archaeal nucleosome assembly is positioned downstream from the si
182 e every cell cycle during G1, but how CENP-A nucleosome assembly is spatially and temporally restrict
184 and why high AT DNA content, which disfavors nucleosome assembly, is widely conserved at centromeres.
186 employed to suppress kinetic bottlenecks in nucleosome assembly, lead to cooperative behavior that c
187 derstanding of the mechanisms of centromeric nucleosome assembly, maintenance, and reorganization rem
188 ypothesized that the information controlling nucleosome assembly may coincide with the information th
189 ose different chaperone-assisted binding and nucleosome assembly mechanisms for the canonical and CEN
192 clear transport, nucleotide excision repair, nucleosome assembly, membrane trafficking, and cytoskele
194 e examined the effects of these drugs on the nucleosome assembly of DNA molecules that display differ
197 nucleosome assembly of H3.3-H4 and inhibits nucleosome assembly of H3.1-H4 by increasing the binding
198 7ph), catalyzed by the PAK2 kinase, promotes nucleosome assembly of H3.3-H4 and inhibits nucleosome a
202 ble) sequences, suggesting an association of nucleosome assembly of trinucleotide repeats and genetic
204 as a model system to determine the effect of nucleosome assembly on nucleotide excision repair (NER)
205 to increased and decreased propensities for nucleosome assembly on the (CAG)n and (CGG)n repeats, re
207 We have used magnetic tweezers to study nucleosome assembly on topologically constrained DNA mol
208 verify our hypothesis that the lack of full nucleosome assembly on topologically constrained tethers
209 The FRA16B DNA fragments strongly exclude nucleosome assembly only in the presence of distamycin,
210 , it was shown that H2Bub1 was important for nucleosome assembly onto nascent DNA at active replicati
212 e spatial configuration of the COMPASS-H2Bub-nucleosome assembly, our studies establish the structura
213 roliferating cell nuclear antigen (PCNA) for nucleosome assembly, participates in the establishment o
214 hat CAC is a key intermediate of the de novo nucleosome assembly pathway and that the p48 subunit par
215 er, these results reveal that the CAF-1-PCNA nucleosome assembly pathway plays an important role in t
217 and ssDNA gaps interfere with the ASF1-CAF-1 nucleosome assembly pathway, and drive fork degradation
218 ors influence histone nuclear import and the nucleosome assembly pathway, leading to changes in chrom
222 ne modifications are tied to the alternative nucleosome assembly pathways that use primarily H3 at re
224 oximal to the H2A docking domain that drives nucleosome assembly, positioning it for transfer to the
225 nascent DNA, Okazaki fragment processing and nucleosome assembly potentially affect one another.
226 B dimers was generally poor, suggesting that nucleosome assembly precedes and inhibits HSF binding.
232 cribe the cloning and analysis of Drosophila nucleosome assembly protein 1 (dNAP-1), a core histone-b
233 emodeling factor (ACF), purified recombinant nucleosome assembly protein 1 (dNAP1), purified native c
234 re we show that the acidic histone chaperone nucleosome assembly protein 1 (NAP-1) from yeast reversi
237 coactivator p300, we obtained cDNAs encoding nucleosome assembly protein 1 (NAP-1), a 60-kDa histone
239 found that the cytoplasmic histone chaperone nucleosome assembly protein 1 (Nap1) associates with the
241 d adding an excess of the histone chaperone, nucleosome assembly protein 1 (NAP1) to the H3/H4 prior
248 The self-association properties of the yeast nucleosome assembly protein 1 (yNAP1) have been investig
251 similar overall architecture with the yeast nucleosome assembly protein 1 and human SET/TAF-1beta/IN
253 helicase-interacting protein 1), along with nucleosome assembly protein 1, as novel ubiquitin-intera
257 mber of cellular proteins, in particular the nucleosome assembly protein 1-like protein 1 (NAP1L1), b
260 The truncated TSPYL1 protein that lacks the nucleosome assembly protein domain was retained in the G
264 ch contains three granzyme A substrates, the nucleosome assembly protein SET, the DNA bending protein
265 ociated complex (SET complex) containing the nucleosome assembly protein SET, the tumor suppressor pp
266 to downregulate the expression of NAP1L2, a nucleosome assembly protein we show to be important for
267 es, two histone modification proteins, and a nucleosome assembly protein were detected, clearly indic
269 ompared the abilities of dNLP and Drosophila nucleosome assembly protein-1 (dNAP-1) to promote the de
271 mbly and remodeling factor (ACF), Drosophila nucleosome assembly protein-1, plasmid DNA, and ATP.
275 e assembly protein) belongs to the family of nucleosome assembly proteins (NAPs) and shares 92% ident
276 e 6 and encodes a protein with homology with nucleosome assembly proteins (NAPs); it has tissue-speci
277 ny factors, including the four HIR genes and nucleosome assembly proteins Asf1p and chromatin assembl
278 identified an mRNA, belonging to a family of nucleosome assembly proteins, whose expression is upregu
279 coupling of fork speed and PCNA unloading to nucleosome assembly provides a simple mechanism to adjus
280 IPs are capable of preferentially inhibiting nucleosome assembly, rather than DNA synthesis, suggesti
283 We present evidence for a paradigm in which nucleosome assembly requires the elimination of competin
287 acts occur during concomitant nick-dependent nucleosome assembly shaped by the replication histone ch
288 eosomes replicated in the absence of de novo nucleosome assembly showed that histone modifications do
289 lates one of two Arabidopsis homologs of the nucleosome assembly/silencing protein Asf1 and histone H
290 , our understanding of how it influences the nucleosome assembly, structure, and dynamics remains obs
291 block is 4.9 +/- 0.6-fold less efficient in nucleosome assembly than a similar length pUC19 fragment
292 -fold and 2.1 +/- 0.3-fold less efficient in nucleosome assembly than the respective unmethylated for
293 o aid in understanding the thermodynamics of nucleosome assembly, the equilibrium stabilities of the
294 Indeed, oocytes lack any measurable CENP-A nucleosome assembly through the entire fertile lifespan
295 at as few as six CTG repeats will facilitate nucleosome assembly to a similar extent as the 50 or mor
296 iation suggests that HMG2 may facilitate the nucleosome assembly, transcriptional activation, and DNA
300 l cycle surveillance mechanism that monitors nucleosome assembly without involving the DNA repair pat