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1 er the nucleotide phosphates) that accompany nucleotide binding.
2 alized, ordered, hydrated, and available for nucleotide binding.
3 n this conformation may deleteriously affect nucleotide binding.
6 we found that the binding of NSm affects the nucleotide binding activity of the NB-ARC-LRR in vitro,
8 nd their homologs that represent the NB-ARC (nucleotide-binding adaptor shared by APAF-1, certain R g
9 putative adenylyl cyclase domain fused to a nucleotide-binding adaptor shared by apoptotic protease-
12 s at the active site that promote productive nucleotide binding and couple with changes at the activa
13 inhibition, both in directly contributing to nucleotide binding and in stabilising the nucleotide-bou
16 amyloid signaling pathways involving fungal nucleotide binding and oligomerization domain (NOD)-like
19 chemical modifications that are monitored by nucleotide-binding and leucine-rich repeat (NLR) immune
23 of transposable elements in the expansion of nucleotide-binding and leucine-rich-repeat proteins (NLR
26 urs at the site of communication between the nucleotide-binding and substrate-binding domains of Hsp7
30 trate without perturbing the equilibrium for nucleotide binding at physiological Mg(2+) concentration
31 at increases channel activity did not affect nucleotide binding, but greatly perturbed the ability of
34 e PEAK1 kinase-like domain contains a closed nucleotide-binding cleft that in this conformation may d
35 y caused by the absence of the second cyclic nucleotide binding (CNB) domain and the J-domain in one
36 ne binding required the high-affinity cyclic nucleotide-binding (CNB) and Ras association domains, bu
39 ve to 8-oxoG bypass is due to an alternative nucleotide binding conformation in the precatalytic tern
40 the risk of N-acetylation and identify where nucleotide binding could enhance N-acylation in vivo.
42 that engagement of the MukB ATPase heads on nucleotide binding directs the formation of dimers of he
44 ranslocated bacterial products are sensed by nucleotide binding domain and leucine-rich repeat-contai
45 eral surface-exposed proline residues in the nucleotide binding domain and linker of Arabidopsis ABCB
46 tion in the catalytic site of the C-terminal nucleotide binding domain restored proper protein traffi
47 MlaB, a STAS domain protein, binds the ABC nucleotide binding domain, MlaF, and is required for its
48 us region of DnaK, involving lobe IIA of the nucleotide binding domain, the inter-domain linker, and
49 missense, deletion and nonsense mutations in nucleotide binding domain-2 (NBD2), including W1282X, N1
51 nds that interact with the regulatory cyclic nucleotide-binding domain (CNB) of the cAMP sensor, EPAC
52 ting is mediated by the intracellular cyclic nucleotide-binding domain (CNBD) connected to the pore-f
54 n two well-structured domains: an N-terminal nucleotide-binding domain (NBD) and a C-terminal substra
56 te-controllable docking and undocking of its nucleotide-binding domain (NBD) and substrate-binding do
57 docked model predicted that a region in the nucleotide-binding domain (NBD) of DnaK interacted with
58 e to species-selectivity, we investigate the nucleotide-binding domain (NBD) of Hsp90 from the most c
59 ponent of immunoregulation and a subgroup of nucleotide-binding domain (NBD), leucine-rich repeat (LR
61 of phenylalanine 508 (F508del) in the first nucleotide-binding domain (NBD1) of the cystic fibrosis
62 e-causing mutations located within the first nucleotide-binding domain (NBD1) of the cystic fibrosis
63 ointed critical N-terminal domain (NTD), NTD-nucleotide-binding domain 1 (NBD1) linker, NBD1, and mid
65 e reproduced in vitro using purified F508del nucleotide-binding domain 1 and SUMOylation reaction com
67 ic assembly of the channel; ATP binds at the nucleotide-binding domain and inhibits channel activity.
69 oehn et al investigate how activation of the nucleotide-binding domain and leucine-rich repeat (NLR)
71 urrently evolved at the DANGEROUS MIX2 (DM2) nucleotide-binding domain and leucine-rich repeat (NLR)-
72 nSeq) was developed to accelerate mapping of nucleotide-binding domain and leucine-rich repeat contai
73 MHC class I transactivator (CITA), NLRC5 [nucleotide-binding domain and leucine-rich repeats conta
74 tural element in synergy with the HCN cyclic nucleotide-binding domain and specific interactions near
79 rmation of a conserved proline in the cyclic nucleotide-binding domain determines the activation kine
80 inding of ATP and thereby impair ATP-induced nucleotide-binding domain dimerization and ABCB4 functio
82 terminal linker connecting S6 and the cyclic-nucleotide-binding domain interacts directly with both t
85 In this study, we explore the role of the nucleotide-binding domain leucine-rich repeat containing
86 ivate homozygous mutation in NLRP1, encoding Nucleotide-Binding Domain Leucine-Rich Repeat Family Pyr
88 ent of MBD1-3 was found to interact with the nucleotide-binding domain of ATP7B, thus physically coup
90 We show that TRIP8b binds the HCN cyclic nucleotide-binding domain through a 37-residue domain an
91 vated type I interferon production, and NLR (nucleotide-binding domain, leucine repeat domain-contain
92 in-1beta (IL-1beta), interleukin-18 (IL-18), nucleotide-binding domain, leucine rich family (NLR) pyr
93 e leukocytes to produce MPs and activate the nucleotide-binding domain, leucine-rich repeat pyrin dom
96 sis inhibitory proteins (NAIPs) activate the nucleotide-binding domain, leucine-rich repeat-containin
97 bsiella hemolysin gene; TNF-alpha; IFN-beta; nucleotide-binding domain, leucine-rich-containing famil
98 tion of EGFR, protease-activated receptor 2, nucleotide-binding domain, leucine-rich-containing famil
99 tion of EGFR, protease-activated receptor 2, nucleotide-binding domain, leucine-rich-containing famil
100 ress immunity; however, the plant can evolve nucleotide-binding domain-leucine-rich repeat domain-con
107 e transport cycle is the dissociation of the nucleotide-binding-domain dimer, while ATP hydrolysis pe
108 s undergone at the critical interfaces where nucleotide binding domains (NBDs) contact intracellular
110 membrane by coupling ATP-driven movements of nucleotide binding domains (NBDs) to the transmembrane d
111 uggesting intact ion permeation pathways and nucleotide binding domains (NBDs), albeit with reduced o
114 The interface between its two cytosolic nucleotide binding domains and coupling helices conferre
115 d in conserved residues of either of the two nucleotide binding domains and determined the effect on
116 l inward-facing conformation whereby the two nucleotide binding domains are misaligned along a two-fo
117 s reveals how reversible dimerization of the nucleotide binding domains drives opening and closing of
119 Here we show that DNA bricks with longer, 13-nucleotide binding domains make it possible to self-asse
120 etween multiple binding events in the cyclic nucleotide binding domains of HCN pacemaker channel.
121 ngin domains heterodimerize and contact both nucleotide binding domains of the Rag heterodimer, while
123 ibitory segment (AIS), four predicted cyclic nucleotide-binding domains (CNBs), and a kinase domain (
124 disengaged from its inhibitory position; the nucleotide-binding domains (NBDs) form a "head-to-tail"
125 r-bound ABCB1 sites are amplified toward the nucleotide-binding domains (NBDs), revealing how the pla
126 tional states with minimal separation of the nucleotide-binding domains in the inward-facing conforma
129 p connect the transmembrane domains with its nucleotide-binding domains, and several residues in thes
133 idative stress does not significantly impact nucleotide binding equilibria, but does stimulate a 2-fo
134 onic currents suggests a model in which each nucleotide binding event to NBS2 of SUR1 is independent
135 calization of these events revealed that SRX-nucleotide-binding events are fivefold more frequent in
136 cts of RRAS2 biochemical behavior, including nucleotide binding, GTP hydrolysis, and interaction with
138 ber of the higher eukaryotes and prokaryotes nucleotide-binding (HEPN) domain-containing nuclease fam
139 by the two Higher Eukaryotes and Prokaryotes Nucleotide-binding (HEPN) domains, is required for degra
142 eport results from assays for solution-based nucleotide binding, intrinsic and GTPase-activating prot
143 alysis afforded thermodynamic parameters for nucleotide binding (Kd , DeltaG, DeltaH, and DeltaS at 3
147 Here we identify epigenetic regulation of nucleotide-binding leucine rich repeat or Nod-Like Recep
149 Wolffia has also lost most of the conserved nucleotide-binding leucine-rich repeat (NLR) genes that
153 gers cell death and autoimmunity through the nucleotide-binding leucine-rich repeat (NLR) protein SUM
154 to identify Recognition of XopQ 1 (Roq1), a nucleotide-binding leucine-rich repeat (NLR) protein wit
155 ACQOS is identical to VICTR, encoding a nucleotide-binding leucine-rich repeat (NLR) protein(3).
159 ts, disease resistance is often conferred by nucleotide-binding leucine-rich repeat (NLR) proteins, i
160 hed with stress response proteins, including nucleotide-binding leucine-rich repeat immune receptors,
161 d that narrowed the Ptr1 candidates to eight nucleotide-binding leucine-rich repeat protein (NLR)-enc
162 s, including a detailed multi-genome-derived nucleotide-binding leucine-rich repeat protein repertoir
163 luding two linked genes encoding coiled-coil nucleotide-binding leucine-rich repeat proteins designat
165 etect pathogen infection using intracellular nucleotide-binding leucine-rich repeat receptors (NLRs)
166 -function mutations in the gene encoding the nucleotide binding, leucine-rich repeat (NLR) protein Nb
167 in the translation of TIR domain-containing, nucleotide binding, leucine-rich repeat (TNL) immune rec
168 ssion by at least one of four genes encoding nucleotide-binding, leucine-rich repeat (NLR) immune rec
170 ogens, and most R genes encode intracellular nucleotide-binding, leucine-rich repeat (NLR) proteins.
173 plants, on top of existing phytohormone and nucleotide-binding-leucine-rich-repeat (NLR) networks, t
179 (TIR) or coiled-coil (CC) domain, a central nucleotide-binding (NB) domain, and a C-terminal leucine
184 of genes encoded for components of the TLR, nucleotide binding oligomerization domain-like receptor,
185 ptides) activate innate immune cells through nucleotide-binding oligomerization domain (NOD) 1 and/or
186 bacterial sensors, it was proposed that the nucleotide-binding oligomerization domain (NOD) proteins
187 , termed the inflammasome, by members of the nucleotide-binding oligomerization domain (Nod), leucine
188 ation of immune response pathways, including nucleotide-binding oligomerization domain (NOD)-, Toll-,
190 we highlight recent advances on the roles of nucleotide-binding oligomerization domain (NOD)-like rec
192 yrin domain containing 1 (NLRP1), NLRP3, and nucleotide-binding oligomerization domain (NOD)-like rec
194 de (MDP) adjuvant, which activates cytosolic nucleotide-binding oligomerization domain 2 (NOD2).
195 lasmatic pattern recognition receptor, NOD2 (nucleotide-binding oligomerization domain 2), belongs to
199 ncentrations of 25 nmol/L or greater induced nucleotide-binding oligomerization domain, leucine-rich
200 , including IL-1 receptor (IL-1R) family and nucleotide-binding oligomerization domain, leucine-rich
201 ceptor-interacting protein 1, IFNbeta-1, and nucleotide-binding oligomerization domain, leucine-rich
202 TRIF-related adapter molecule, IRF-3, HIF-1, nucleotide-binding oligomerization domain, leucine-rich
203 f the Crohn's disease susceptibility protein nucleotide-binding oligomerization domain-containing 2 (
204 muropeptides that more effectively activates nucleotide-binding oligomerization domain-containing pro
206 mal regulation of the innate immune receptor nucleotide-binding oligomerization domain-containing pro
207 nd synergistically enhanced by activation of nucleotide-binding oligomerization domain-containing pro
209 by C-C chemokine receptor (CCR) 2, CCR5, and nucleotide-binding oligomerization domain-containing pro
211 mune sensors, including Toll-like receptors, nucleotide-binding oligomerization domain-containing rec
212 including, cytokine and chemokine signaling, nucleotide-binding oligomerization domain-like receptor
214 eta precursor requires processing by the the nucleotide-binding oligomerization domain-like receptor
215 n of bone marrow-derived macrophages via the nucleotide-binding oligomerization domain-like receptor
216 atory effects of the innate immune molecule, nucleotide-binding oligomerization domain-like receptors
217 bial sensors, recent evidence indicates that nucleotide-binding oligomerization domains (NODs) can al
218 his approach by investigating the effects of nucleotide binding on the structure of myosin's catalyti
219 kinase domain is repurposed for noncanonical nucleotide binding or to stabilize unique, inactive kina
220 ises DNA binding, conformational transition, nucleotide binding, phosphoester bond formation, and dis
221 art of the communication pathway between the nucleotide binding pocket (purine binding loop) and the
222 ghly conserved residues localized around the nucleotide binding pocket of the GTPase and are predicte
223 is able to adjust the key residues in the 5-nucleotide binding pocket to compensate for the change i
224 reported GPCR-G(i/o) complexes (in which the nucleotide-binding pocket adopts more flexible conformat
225 owed DNA ordered in the previously described nucleotide-binding pocket, supporting the suggested role
233 ify that a cluster of five Immune-associated nucleotide-binding protein (IAN) genes (IAN2 to IAN6) is
235 of protein kinase A (PRKACA) or the guanine nucleotide-binding protein subunit alpha (GNAS) gene, th
236 between beta3 integrin and Galpha13 (guanine nucleotide-binding protein subunit alpha 13), resulting
238 we show by microarray and RNAi that guanine nucleotide-binding protein subunit alpha13 (Galpha13) is
242 structural and dynamic features that define nucleotide binding, providing insight into how altering
243 se that communication between the actin- and nucleotide-binding regions of myosin assures a proper ac
247 s, but the mechanisms that enable the cyclic nucleotide-binding signal to regulate distant domains ar
250 ethionine residue M584 (Walker B sequence of nucleotide binding site 1) by glutamate imparted hydroly
251 hen the catalytic glutamate of the canonical nucleotide binding site 2 was mutated to glutamine.
252 ion with a citrate of crystallization at the nucleotide binding site and exhibits structural features
254 single gene candidate encoding a coiled-coil nucleotide binding site Leucine-rich repeat (NLR) recept
255 r extent, in the switch regions flanking the nucleotide binding site, can shed light on binding and a
261 rived from WEW, which encodes a coiled-coil, nucleotide-binding site and leucine-rich repeat protein
262 in mouse liver, we show that proximity to a nucleotide-binding site increases the risk of N-acetylat
263 sp superfamily of enzymes shares an atypical nucleotide-binding site known as the ATP-grasp fold.
264 ogens by plants is mediated by intracellular nucleotide-binding site leucine-rich repeat (NLR) recept
267 mutations disrupt communication between the nucleotide-binding site of myosin and its lever arm that
269 s) of the hGMPK CORE domain distant from the nucleotide-binding site of this domain modulate enzymati
270 essed by swapping it with the Sec7d from ARF nucleotide-binding site opener (ARNO)/cytohesin-2, a pla
271 er, a reciprocal signal, propagated from the nucleotide-binding site, provides a mechanism for coupli
272 f 1216 receptor kinases and 56% (343) of 616 nucleotide-binding site-leucine-rich repeat genes harbor
274 ine and guanine nucleotides to the canonical nucleotide binding sites of the regulatory Bateman domai
275 nother parasite protein with putative cyclic nucleotide binding sites, Plasmodium falciparum EPAC (Pf
278 sine N-acylation by acyl-CoAs is enhanced by nucleotide-binding sites and may contribute to higher st
279 act sites of the takinib scaffold within the nucleotide-binding sites of each respective kinase.
281 ro lysine N-malonylation by malonyl-CoA near nucleotide-binding sites which overlaps with in vivo N-a
282 P greatly diminish N-malonylation near their nucleotide-binding sites, but not at distant lysine resi
284 isentangles the protein conformation and the nucleotide binding state of Hsp90 and extracts the kinet
285 terodimeric Rag GTPases among four different nucleotide-binding states, only one of which (RagA/B*GTP
286 ve site in the absence of PPi, suggests that nucleotide binding stimulates PPi dissociation and occur
287 g resonance energy transfer (QRET) assay for nucleotide binding studies with RAS and heterotrimeric G
288 36-amino acid long C-terminal domain in the nucleotide-binding subunit alpha (Mtalpha) of F-ATP synt
291 protochlorophyllide reduction, illustrating nucleotide binding to both subunits as a prerequisite fo
293 cleotides) of steady-state and time-resolved nucleotide binding to dissect the role of NBS2 of the ac
295 a coli SMC complex, MukBEF, as a function of nucleotide binding to MukB and subsequent ATP hydrolysis
298 ormation of HerA and detail the mechanism of nucleotide binding to the HerA-NurA complex from thermop
299 FliM interacts with FlhG independent of nucleotide binding, while FlrA exclusively interacts wit