ライフサイエンスコーパス: pair-wise

1 at the face-space geometry, revealed through pair-wise activation similarities of face-selective neur

2 ): 55.2-66.0%] with the grade of record, and pair-wise agreement among all human graders was 61.5% (9

3 The pair-wise agreement between clinicians and PLR(TD) was s

4 ding kinetics of 23 single and 126 ECD1-ECD2 pair-wise alanine mutations was measured.

5 sers can upload the standard BLAST output in pair-wise alignment format as input to the web server (i

6 h and consensus logos to motif discovery and pair-wise alignment.

7 , we show that multi-sequence (as opposed to pair-wise) alignment methods are substantially better at

8 th T-Coffee we pre-process a data set of all pair-wise alignments between the sequences.

9 lly conserved ungapped blocks in genome-wide pair-wise alignments of recently completed species of Dr

10 h by using a combination of local and global pair-wise alignments to generate the library.

11 on-exonic sequences that are not captured in pair-wise alignments, thus illustrating the importance o

12 vide graphic representation of complex BLAST pair-wise alignments.

13 mpared to the corresponding tumor tissues in pair-wise analyses (p < 0.05).

14 a statistically significant difference using pair-wise analysis (p=0.0041).

15 Through comprehensive pair-wise analysis of stress responses across pancreatic

16 Pair-wise analysis, before and after Benznidazole treatm

17 x programming: for the bare Ising Model with pair-wise and bias factors representing the system witho

18 , with diverse architectures, for evaluating pair-wise and iterative sequence similarity searches.

19 captures the most neighboring SNPs (through pair-wise and multiple-marker LD) is selected as a tag S

20 ustomization and new structure alerts; (iii) pair-wise and representative protein structure alignment

21 ) of single-herbicide modes of action and to pair-wise and three-way mixtures between different herbi

22 ts using three methods: (i) mean-field, (ii) pair-wise, and (iii) one-hole approximations.

23 nsional scaling on a data matrix composed of pair-wise angular distances for multiple phi-Psi values

24 Using a pair-wise approach, the presence of each abnormal biomar

25 The pair-wise approximation performs better in the transient

26 The mean-field and pair-wise approximations give indistinguishable asymptot

27 In addition, we demonstrate that pair-wise associations between miRNAs can be used to gro

28 Furthermore, we sought to examine pair-wise associations of particular genetic alterations

29 A continuum of alleles model with pair-wise AxA epistasis is proposed and its transmission

30 The model is tested for pair-wise binary classification of four burn conditions

31 l Model of pandemic of the attractive Ising (pair-wise, binary) type, where each node represents a ce

32 found 390 examples of spatially constrained pair-wise binding, including such novel pairs as c-Fos:c

33 -dimensional structure and provide a residue pair-wise break up of the results.

34 a learned reconstruction method operating on pair-wise captured imaging data.

35 In contrast, any pair-wise chimera of the three mutants fails to form spo

36 nologies enable a genome-wide measurement of pair-wise chromatin interaction.

37 Genome-wide analysis of pair-wise chromatin interactions using chromatin conform

38 By performing immunoprecipitations after pair-wise coexpression in Sf9 cells, we show that Dgp71W

39 h high spatiotemporal resolution imaging and pair-wise colocalization of myosin XIK, exocyst subunits

40 MA core, were replaced individually or in a pair-wise combination with the more hydrophobic phenylal

41 B4(Rep) and CP(Rep)), were mixed in all four pair-wise combinations and infiltrated to Nicotiana bent

42 mentioned proteins either individually or in pair-wise combinations caused karyotype changes as revea

43 We tested a spectrum of pair-wise combinations of cognate and noncognate Mtb tox

44 Pair-wise combinations of markers identified EGFRvIII an

45 kill target cells by engagement of specific, pair-wise combinations of receptors.

46 dily discriminate between the members of all pair-wise combinations of the tested isoforms.

47 he localization patterns of dimers formed by pair-wise combinations of three different beta subunits

48 mediated by taste cells that express one or pair-wise combinations of three G protein coupled recept

49 vity based on the individual components, all pair-wise combinations, and the composite of the three c

50 randed DNA template and generate millions of pair-wise combinations.

51 Analyses were by intention to treat, both by pair-wise community-level comparisons and by child-level

52 Further, pair wise comparison of DEGs of double mutant with singl

53 In a pair wise comparison of the generated mouse MSDK librari

54 ct subgroups with different risks of PCSM in pair-wise comparison (p < 0.0001).

55 Pair-wise comparison analyses (between individual k-mers

56 r in a certain subtype of tumors through the pair-wise comparison and by hierarchical clustering anal

57 local qualities of a pool of models using a pair-wise comparison approach.

58 A pair-wise comparison indicated that roseltide rT7 is >10

59 r an observed change in gene expression in a pair-wise comparison is significant.

60 with 1.5 for placebo (P < or = .05 for each pair-wise comparison of a linaclotide dose to placebo).

61 We conducted pair-wise comparison of aaCVM between SDI groups with th

62 Intent-to-treat pair-wise comparison of ABMT with CT, CT with CBMT, and

63 Using pair-wise comparison of aligned nucleotide sequences of

64 Rapamycin efficacy was tested by pair-wise comparison of changes in individual voiding da

65 tances showed a median distance of 0.603 for pair-wise comparison of fragments indicating significant

66 Through the pair-wise comparison of normal and DCIS SAGE libraries,

67 A direct pair-wise comparison of PAM4 and CA19-9 immunoassays for

68 Pair-wise comparison of Phi(st) values derived from AMOV

69 A pair-wise comparison of the experimental and control ser

70 By using distance matrices for the pair-wise comparison of these 112 temporal gene expressi

71 Pair-wise comparison of three experimental conditions wa

72 Post-hoc pair-wise comparison revealed increased frontocentral sl

73 Each pair-wise comparison revealed unique global proteomic an

74 ntire current PDB release with T-Server, and pair-wise comparison using the TOPOFIT method through th

75 univariate analysis of variance followed by pair-wise comparison was used to establish statistical s

76 ty and death differed significantly for each pair-wise comparison.

77 e significant differences in PhiST values in pair wise comparisons between LCI and LSI.

78 merous DNA methylation changes were found in pair-wise comparisons among the four groups.

79 Pair-wise comparisons between groups were conducted by S

80 , most comparative sequencing has focused on pair-wise comparisons between human and a limited number

81 fts in relative nuclear speckle distances in pair-wise comparisons between human cell lines (H1, HFF,

82 to compute the matrix, first all-against-all pair-wise comparisons between protein sequences are comp

83 icroarray data for ten time points with nine pair-wise comparisons during fruit development and ripen

84 the Roundup repository contains all possible pair-wise comparisons for over 250 genomes, including 32

85 Human-mouse pair-wise comparisons have limited utility for identifyi

86 Using pair-wise comparisons in breast DCIS, we found higher pr

87 nofluorescence colocalization, we found that pair-wise comparisons of 15 angiogenic-relevant alpha-gr

88 It is based on pair-wise comparisons of all cells to each other where e

89 In pair-wise comparisons of anti-tumor necrosis factor agen

90 Pair-wise comparisons of hospital quality were performed

91 an compare an unlimited number of maps, view pair-wise comparisons of known correspondences, and sear

92 Age was log transformed, and pair-wise comparisons of means were made.

93 However, pair-wise comparisons of telomere dynamics between NF an

94 Using pair-wise comparisons of tuber-related tissues, we were

95 ion loss and a proposed similarity loss from pair-wise comparisons of waveform segments over time as

96 For each parameter, pair-wise comparisons were performed using the mixed mod

97 ectively, analysis of variance, P < 0.05 for pair-wise comparisons).

98 4.7% [CI, 62.5% to 67.0%]; P < 0.001 for all pair-wise comparisons).

99 ss the 4 arms by 1-way ANCOVA (P = 0.02); by pair-wise comparisons, only rhGH (decreasing SI; P = 0.0

100 d from 30% per Brock to 71% per CTCAEv3 (all pair-wise comparisons, P < .01).

101 ring across the three groups and verified by pair-wise comparisons, the MSI-H group was associated wi

102 Besides common pair-wise comparisons, we consider a few reasonable stat

103 ge r.m.s.d., for invariant Trp and Cys, four pair-wise comparisons,=1.2 A) but less similar to the fi

104 se data were further processed with post-hoc pair-wise comparisons.

105 s one-way analysis of variance with post hoc pair-wise comparisons.

106 alysis, and in timepoint-specific multi- and pair-wise comparisons.

107 Pair-wise conditional association tests showed rs1800925

108 ally structured ecological networks in which pair-wise consumer-resource interactions allometrically

109 ted QL9 and dEV8 peptide antigens, in unique pair-wise contacts, resulting in greater structural comp

110 How functional, pair-wise cooperative interactions arise between regulat

111 Pair-wise cooperativity between regulators-whereby two d

112 Cell, Stewart-Ornstein et al. use systematic pair-wise correlation analysis of expression noise in a

113 Comprehensive pair-wise correlation and expression level profiles are

114 identify as synthetic which also have better pair-wise correlation between genes.

115 t with 1,821 instances, 12 features with low pair-wise correlation, and seven phase labels.

116 However, in vCA1, APP/PS1 mice had increased pair-wise correlations and entropy as compared to age ma

117 Finally, pair-wise correlations between intraneuronal percentage

118 Furthermore, there were more strong pair-wise correlations of metabolite abundance in transg

119 coefficient r ranged from 0.60 to 0.85, all pair-wise correlations P < 0.05), and similar patterns f

120 Comprehensive pair-wise correlations were calculated between gene expr

121 ing approach were used to identify features (pair-wise correlations) that discriminated patients with

122 via singular value decomposition to extract pair-wise cosine values between the term (keyword) and m

123 in HapMap CEU) compared to its conventional pair-wise counterpart, when conditioning on a fixed tag

124 We next quantified pair-wise coupling (cross-correlation) between the time

125 These pair-wise couplings can be identified from a quantity we

126 First, within a protein, pair-wise couplings exist that define the magnitude and

127 er functional connections are often based on pair-wise cross-correlation between activity patterns of

128 onger and shorter time scales and found that pair-wise cross-correlation was predominantly short term

129 h genetically encoded photo-crosslinkers and pair-wise crosslinking revealed distinct footprints of a

130 Finally, by calculating a pair-wise decomposition of interactions, interaction pat

131 parts: the first part identifies significant pair-wise dependencies from the given binary matrix usin

132 Many pair-wise differences of locomotor costs between similar

133 existing theory relates strain hardening to pair-wise dislocation reactions in which two intersectin

134 e in spatial position (sigma(2)<15 m(2)) and pair-wise dispersal frequencies (4 Nm < 25 for plots sep

135 , and SAXS would yield the structure-related pair-wise distance distribution function p(r) vs. r.

136 We found significant correlations between pair-wise divergence of viral sequences and HLA class I

137 Despite low pair-wise diversity among isolates, the number of polymo

138 Total and pair-wise diversity was higher near the centromeres and

139 Some of the pair-wise domain combinations that are highly duplicated

140 Four reviewers evaluated pair-wise each study.

141 f the methods in detecting LAT was evaluated pair-wise (eg, B-LATPeak versus B-LATOnset).

142 Second, in addition to the pair-wise energetic coupling between residues, there exi

143 ected that correspond to previously observed pair-wise energetic couplings.

144 in interacts with two or more neighbors, the pair-wise energies are even less.

145 lgorithms can adjust to implement any custom pair-wise energy tables and protein structure models.

146 predicted to be equal to the variance of the pair-wise epistatic effects.

147 false positive rate (FPR) in the mapping of pair-wise epistatic quantitative trait loci (QTL).

148 re consisting of 112 genes organized into 80 pair-wise expression comparisons.

149 Although coexpression analysis via pair-wise expression correlation is popularly used to el

150 urrents of the nicotinic receptors formed by pair-wise expression of the rat alpha2, alpha3, or alpha

151 from neuroblasts that generate neurons in a pair-wise fashion, with the two daughters providing the

152 M) with linear filter feature selection used pair-wise FC as features to predict the emotional expres

153 A cluster analysis was performed on pair-wise FST values among pools including seven pools t

154 es and genetic loci to minimize intersecting pair-wise gene connections.

155 The regulatory elements include pair-wise gene correlation, biological pathways, protein

156 Furthermore, popular pair-wise gene evaluation methods, e.g. TSP and TSG, are

157 Here, we propose single-cell pair-wise gene expression (scPAGE), a novel method to de

158 a supervised learning methodology to predict pair-wise gene functional similarity from multiplex gene

159 a supervised learning methodology to predict pair-wise gene functional similarity from multiplex gene

160 Y) and doublets are helpless for discovering pair-wise gene interactions, our approach can discover t

161 Implicated Loci (GRAIL), to identify whether pair-wise gene relationships defined using PubMed text s

162 s of European ancestry, here we estimate the pair-wise genetic correlations between breast, colorecta

163 lic states, corresponding to 2016 single and pair-wise genetic perturbations.

164 This paper extends an automated pair-wise genome comparison technique used to identify o

165 o probe this underexplored area through full pair-wise genome scans and conventional GWAS in diastoli

166 Single and pair-wise global quality assessment software is also ava

167 Pair-wise glutathione S-transferase pull-down assay show

168 Pair-wise group comparisons showed that the before anima

169 To summarise pair-wise group differences, we report the area under th

170 sis and logistic regression for all possible pair-wise HLA combinations.

171 All pair-wise HRT-genotype and BCP-genotype interactions wer

172 wise IBD sharing can be constructed based on pair-wise IBD relationships.

173 ated with alignment characteristics, such as pair-wise identity and the number of sequences in the al

174 te to the earliest incompatibilities; and 3) pair-wise incompatibilities dominate over higher order,

175 Pair-wise inter- and intraobserver agreement was moderat

176 Pair-wise inter-group diagnostic separation was signific

177 ntact distance and orientation in evaluating pair-wise inter-residue interactions.

178 ty, and it only depends on the extent of the pair-wise interaction between different types of molecul

179 tatic genetic model should include potential pair-wise interaction effects of all loci.

180 o-mutant cycle analysis was used to estimate pair-wise interaction free energies for a pair of charge

181 a number of new base triples not detected by pair-wise interaction statistics within the rRNA molecul

182 ting of seven genera as nodes and all of its pair-wise interactions among the bacteria are facilitati

183 /Lif1, our results have revealed a series of pair-wise interactions among the factors that complete t

184 irregular zigzag-folded fiber with dominant pair-wise interactions between nucleosomes i and i +/- 4

185 we carry out a detailed study of stabilizing pair-wise interactions between the positively charged ly

186 Consequently, theories focusing on simple pair-wise interactions cannot predict ecological and/or

187 ions and by analyzing the effects of STDP on pair-wise interactions of neurons.

188 that a regulation mechanism based on simple pair-wise interactions through a common stomach is a pla

189 Their pair-wise interactions were RNA dependent.

190 nteraction mapping by SPLASH identifies many pair-wise interactions, 40% of which form alternative st

191 their actuator functions as well as dynamic pair-wise interactions.

192 g. TSP and TSG, are helpless for discovering pair-wise interactions.

193 l to or better than that obtained with film (pair-wise interreader kappa for digital images ranged fr

194 Prior work on pair-wise kinetochore protein interactions has been unab

195 mprehensively determine whether simultaneous pair-wise knockdown of BBS genes reveals genetic interac

196 lease 21, our algorithm outperforms standard pair-wise LD approach in several aspects.

197 typed in order to derive haplotypes, and the pair-wise LD between SNPs was investigated in 600 haplot

198 lyzed to produce blocks of markers in strong pair-wise LD.

199 For each pair-wise lesion type comparison, linear discriminant an

200 Analysis of pair-wise linkage disequilibrium (LD) of the five regula

201 uter programs are introduced which calculate pair-wise linkage disequilibrium statistics and conduct

202 ization of the sparse prevention solution at pair-wise links which are NOT these which are most utili

203 Consecutive pair-wise marker linkage disequilibrium was not strictly

204 We recorded the following pair-wise mean difference in change in IBDQ-B score betw

205 We did pair-wise meta-analyses using the random-effects model a

206 le to methodological risks than conventional pair-wise meta-analysis.

207 ores generated from our machine learning and pair-wise methods have an average per-target correlation

208 In contrast, pair-wise mixtures of separately transcribed plasmids ca

209 The pair-wise model has been developed to include both direc

210 ed or 'hidden' SNPs being detected (having a pair-wise or haplotype r2 with a set of tagging SNPs ove

211 ition, biophysical variability alone reduced pair-wise output spike correlations to low levels.

212 d validated the roles of 614 cell genes, but pair-wise overlap among the four gene lists was only 3%

213 The pair-wise overlap of these enriched-category lists was h

214 /100 000, IV- 89 (IQR: 70, 110)/100 000; all pair-wise p-values < 0.001].

215 peak clustering method and are built into a pair-wise peak similarity score function.

216 Pair-wise Pearson's and polychoric correlations were cal

217 ptor-based Docking algorithm), is based on a pair wise protein docking prediction algorithm, LZerD, w

218 Out of 320 pair-wise protein-protein interaction assays done using

219 gorithms--one haplotype r2-based method, one pair-wise r2-based method and one method which was based

220 The basic element, the pair-wise relative contact, is constructed from a sequen

221 ure the complexity of protein packing, these pair-wise relative contacts can be superimposed around a

222 Furthermore, these pair-wise relative contacts correlate well with sequence

223 in analyzing protein structure, we used the pair-wise relative contacts to analyze two sets of prote

224 perfamily structure set produced 1266 unique pair-wise relative contacts, whereas the family structur

225 the family structure subset gave 1001 unique pair-wise relative contacts.

226 Pair-wise residue-residue contacts in proteins can be pr

227 Nonetheless, the logistics of pair-wise screening has resulted in a cumbersome and inc

228 n of Y2H that eliminates the requirement for pair-wise screening.

229 We use a semi-global pair-wise sequence alignment method to obtain sequence m

230 the region of interest or examining the raw pair-wise sequence alignment.

231 eic acid sequence searches, (2) multiple and pair-wise sequence alignments, (3) gene feature searches

232 entally, most of which are not detectable by pair-wise sequence comparisons alone.

233 The clustering is based on analysis of all pair-wise sequence comparisons between proteins using th

234 ondrial genome within E. propertius (over 4% pair-wise sequence divergence) but no such differentiati

235 inally related at best in each pair (average pair-wise sequence identity = 13%).

236 quence relationship is undetectable (average pair-wise sequence identity = 8%).

237 8 TIGR Gene Indices, we used high-stringency pair-wise sequence searches and a reflexive, transitive

238 ction accuracy values are independent of the pair-wise sequence similarities within each of the align

239 The difference between total and pair-wise SFP diversity is a relative measure contrastin

240 head-to-tail dimer, which is stabilized via pair-wise shape and charge complementarity.

241 Pair-wise similarities for both FV and for HHI were deri

242 Implicit pair-wise similarity judgments were collected by using a

243 Using pair-wise single-nucleotide polymorphism distances as a

244 nalyzed how the strength of 254,032 possible pair-wise species interactions depended on 90 stochastic

245 the distribution of time delay ( t) between pair-wise strongly associated diseases (correlation coef

246 of sequence profiles derived from exhaustive pair-wise structural alignments for local structures wit

247 ting set of 1421 protein pairs, of which the pair-wise structures are similar (RMSD< approximately 4A

248 We constructed matrices of pair-wise substitutions in mid-acceptor stem at nt 3/70

249 persion van der Waals-London forces based on pair-wise summation of dipole-dipole interactions across

250 eractions, our approach can discover typical pair-wise synergic genes efficiently.

251 Several efforts to discover pair-wise synergy have been made based on the informatio

252 MIC(X1; X2; Y) is employed to detect pair-wise synergy in simulation and cancer microarray da

253 ial analysis of variance followed by posthoc pair-wise testing.

254 igen (TCR) alpha chain V-genes were compared pair-wise, the numbers of nucleotide differences showed

255 First, IRON normalization occurs pair-wise, thereby avoiding the need for all chips to be

256 ng chi(2) tests of independence and compared pair- wise using a binomial test of proportions.

257 Pair-wise voxel-based analyses were used to define globa