ライフサイエンスコーパス: parameterize

1 the northern hardwood forest when adequately parameterized.

2 We leverage these data to parameterize a computational model of translation, keepi

3 These data were used to parameterize a deterministic matrix model, which allowed

4 our streams in Western Massachusetts, USA to parameterize a discrete-time population projection model

5 We then used these data to parameterize a dynamic bioclimatic envelope model, to in

6 We then parameterize a dynamic vegetation model based on these d

7 We use single-cell microscopy to parameterize a full cell-cycle model based on independen

8 dystrophy type 1, provides an opportunity to parameterize a mathematical model for repeat length evol

9 dian state of Bihar, Bangladesh and Nepal to parameterize a mathematical model.

10 6-8 months old) C57BL/6 mice were used to re-parameterize a mechanistic mathematical model of acute i

11 g mutant phenotypes and fluorescence data to parameterize a reaction-diffusion model of the kinases P

12 e of a small number of measurements to fully parameterize a regulatory circuit and quantify its impac

13 lation of the real protein (RP), and used to parameterize a self-avoiding heterogenous polymer (SAHP)

14 dinal field study of vampire bats in Peru to parameterize a series of mechanistic transmission models

15 icroscopic rate information from the MSM, we parameterize a simple four-state kinetic model to 1) det

16 Finally, we parameterize a simple temperature-based model to predict

17 Here, we develop and parameterize a system-wide biophysical model of Cas9-bas

18 To this end, we parameterize a well-supported mathematical model using t

19 Potjans and Diesmann (2014) parameterized a four-layer, two cell type (i.e. excitato

20 Here we parameterized a joint species model of frugivory and see

21 side chain flexibility, FTMap/param, used to parameterize additional probes and FTDyn, for mapping en

22 These findings can aid in better parameterizing aerosol effects in climate models for the

23 Finally, we parameterize alleles based on a range of properties and

24 east Screening Study (CNBSS), we develop and parameterize an individual-based mechanistic model for b

25 aspects of the statistical analysis used to parameterize an IPM using data on marked individuals.

26 lts from integrated population modelling, we parameterized an age-structured population projection ma

27 We developed and parameterized an agent-based model for two population de

28 Using observational data, we parameterized an exponential random graph model containi

29 Here, we took a data-driven approach and parameterized an information-theoretic model to infer th

30 We then look at very general approaches to parameterizing an IPM, using a wide range of statistical

31 at increase accuracy due to their ability to parameterize and adapt to changing environments.

32 cal forests and enable an efficient means to parameterize and evaluate terrestrial biosphere models.

33 GIS and CIGTS trial participants and used to parameterize and validate a Kalman filter model.

34 el based on delay differential equations and parameterize and validate the model with values within t

35 t (HBEF) in New Hampshire, USA, were used to parameterize and validate the models.

36 We parameterize and validate this model with experimental d

37 en a conventional GCM in which convection is parameterized and a "superparameterized" model in which

38 s aegypti and Aedes albopictus The model was parameterized and calibrated using the most up to date i

39 Association model are well over-parameterized and suffer from severe co-linearity and la

40 promoters, ribozymes, RBSs, terminators) are parameterized and used to inform a mathematical model th

41 iophysical cardiac cell models were created, parameterized and validated and are able to simulate ele

42 al framework in which clonal markings can be parameterized and validated.

43 A unified system is described for parameterizing and searching the construction space for

44 processes in global models are crude, highly parameterized, and poorly constrained, limiting the desc

45 ere used to demonstrate how the model can be parameterized, and this preliminary analysis suggests th

46 Previously developed, well-parameterized, and thoroughly-vetted models can be a gre

47 tion algorithm to automatically identify and parameterize APs from text input files.

48 To achieve this, coordination polyhedra are parameterized as FSBs and a simple empirical model to ev

49 Here, based on experiments, we parameterize ash behaviour and develop a model to predic

50 s combine behavioral economic experiments to parameterize aspects of reward-related decision-making w

51 We use a parameterized band structure and a static model dielectr

52 Models were parameterized based on in vivo measurements of CTL infil

53 icrobially-driven processes that are usually parameterized based on laboratory incubations.

54 We then describe how this model is parameterized based on published microbiota data.

55 These disabilities were parameterized based on questions from the SF-12 question

56 Parameterized based on representative indoor and adult h

57 We apply a self-parameterized Bayesian inversion of Rayleigh group and p

58 ized linear model for such bimodal data that parameterizes both of these features.

59 TreeBASE, and EmpPrior-fit, written in R to parameterize branch-length distributions.

60 Mechanistic models, parameterized by a number of unknown parameters, are oft

61 ting of patient-specific mathematical models parameterized by an ex vivo assay that reverse engineers

62 tionally, we developed a mathematical model, parameterized by cell viability experiments under Niloti

63 These small clouds are parameterized by climate models, and changes in their ra

64 t be accurately reproduced by current models parameterized by daily mean temperature (T(mean)).

65 fitting variational autoencoder (VAE) models parameterized by deep neural networks to T cell receptor

66 Parameterized by density functional theory (DFT) calcula

67 non-equilibrium Green's function-based model-parameterized by density functional theory calculations-

68 a of a wide diversity of equal-volume shapes parameterized by elongation and curvature, and predicted

69 EnABLe was parameterized by existing literature and expert elicitat

70 e use a mathematical model of photosynthesis parameterized by field data consisting of chlorophyll fl

71 The model is biologically rich, parameterized by field data, and driven by field-collect

72 dynamics of these communities, which can be parameterized by growth rates, and intra- and inter-spec

73 We used computational models parameterized by in vitro experiments to illustrate the

74 cations in the ion steady-state temperature, parameterized by ion number.

75 ained to a three parameter family of shapes, parameterized by length, depth and the degree of shear.

76 ns of particles diffusing in synthetic cells parameterized by morphometric statistics are then iterat

77 SIDEpro uses energy functions that are parameterized by neural networks trained from available

78 A population dynamics model parameterized by our measurements suggests that interact

79 ish this by using a conditional random field parameterized by random forests trained on reference pan

80 ll preference to expedite pain, which can be parameterized by reducing the rate of the dread-discount

81 r period following the same inverse relation parameterized by system specific constants.

82 The model is parameterized by tapping several available geodatabases

83 In each case, the trade-off is parameterized by the capacity and a second channel param

84 It is parameterized by the k-mer length k, a window length w a

85 This evolution in failure behavior can be parameterized by the width of the crack.

86 ulus can be perceived in two different ways, parameterized by two opposite directions from a continuo

87 mathematically identifiable (i.e., not over parameterized) by combining a novel Hodgkin-Huxley formu

88 es of these enzymes are needed to accurately parameterize C4 biochemical models of leaf CO2 exchange

89 So parameterizing CG force fields, which is both tedious an

90 We developed a thermodynamic model that parameterizes ChIP-seq coverage in terms of genome acces

91 We use these empirical relationships to parameterize classical compartment models for infectious

92 ils of our experimental observations using a parameterized coarse-grained model of VWF.

93 ion with L. serriola, as inferred from field-parameterized competition models, declined with earlier

94 ce oscillations, which obviates the need for parameterizing complex dynamical models.

95 We employ a parameterized computational model to reveal that bridges

96 Then, using a parameterized computational model, we show how an animal

97 We experimentally parameterized conditional rate constants for aqueous U u

98 s the potential utility of an experimentally parameterized continuum model as a predictive tool for p

99 Here we report a parameterized convection model to compute the Rayleigh n

100 rimordial clay-rich layer with the help of a parameterized crustal evolution model; we find that the

101 to five-fold higher than the values used to parameterize current TBMs.

102 motherapy, resulting in a set of 6 minimally parameterized differential equations.

103 In this work, we parameterize diurnal temperature variations as the therm

104 We parameterize dose-dependent changes in spectral signatur

105 To parameterize each model, we use all instances of each mo

106 ess of different payment schemes using field parameterized, ecological economic models of extensive g

107 We parameterized ED2 with species-specific tree physiologic

108 ncer was not associated with urinary cadmium parameterized either in quartiles (comparing highest qua

109 shedding in birds that may be used to better parameterize epidemiological models and understand trans

110 xperimental trans-glycoside NMR J-couplings, parameterized equations obtained from density functional

111 nsensus behavior and can be evaluated over a parameterized family of hypothesized sensing strategies

112 carbon exchange and microclimate (MLCan) was parameterized for a modern US Midwest soybean cultivar.

113 en in Java, and is hence portable and can be parameterized for any organism.

114 A simple predator-prey model parameterized for copepods consuming protists generates

115 Using an ocean color algorithm parameterized for the Arctic Ocean, we show that primary

116 The model was parameterized for this scenario for Mycosphaerella grami

117 tion, there are no known transferable models parameterized for use with multiple social media data so

118 E2F proteins and two Cdk inhibitors, and is parameterized, for the first time, to generate not only

119 ding, basepair stacking, and solvation terms parameterized from a comprehensive series of molecular d

120 ct estimated using an ABM may be biased when parameterized from at least 1 source external to the tar

121 mputed from a permeability-porosity relation parameterized from experimental measurements.

122 for DNA atomistic simulation, which has been parameterized from high-level quantum mechanical data an

123 These model components were parameterized from malaria therapy data and other studie

124 om experimental structures, and interactions parameterized from nearly 200 mus of residue-based coars

125 is mass) of a roe deer population, which are parameterized from statistical functions that either inc

126 female-based integral projection model (IPM) parameterized from unique long-term demographic data for

127 rowth of these OS at 85% RH were also fit to parameterized functional forms.

128 al gradients (temperature change with depth; parameterized here as metamorphic T/P) in the form of pa

129 otential energy function, which led us to re-parameterize hydrogen bond and electrostatic potential e

130 efinement of how the hemody-namic process is parameterized (i.e., by making V0 a free parameter); how

131 article properties are poorly understood and parameterized in climate models.

132 air-sea interface, are poorly understood and parameterized in existing forecast models.

133 Methods for selecting models for parameterizing IPMs are briefly discussed.

134 solution rates in serodiscordant couples and parameterize it with estimates from population-based dat

135 netic interplay of RNA synthesis and CTS and parameterized it with diverse next generation sequencing

136 MGMs consist of a parameterized joint probability density, which implies a

137 and these predictions are then often used to parameterize laboratory experiments designed to assess b

138 present in cloud-resolving simulations with parameterized large-scale circulation.

139 We must exercise caution in parameterizing litter decomposition and aboveground prod

140 ers was evaluated by six different optimally parameterized machine learning algorithms: Support Vecto

141 re we present new diagenetic models to fully parameterize marine P burial.

142 of using non-numerical, qualitative data to parameterize mathematical models.

143 Computations with an experimentally parameterized mathematical model show that modest change

144 We coupled field-parameterized mathematical models of competition between

145 evolution, ecologists are increasingly using parameterized mathematical models.

146 Parameterizing mathematical models has been widely perce

147 re often challenged due to the use of highly-parameterized mathematically complex structures to captu

148 niques have been proposed for fitting highly parameterized mechanistic models to complex time series,

149 elation to fit parameters to this model; the parameterized model predicted larvae's responses to nove

150 The best parameterized model was able to outperform the full FIR

151 he statistical sense that they do not have a parameterized model with an underlying probability distr

152 With our empirically parameterized model, we estimate that, of the total loss

153 ul tools for generating quantitative data to parameterize models of combinatorial cis-regulation.

154 review existing data sources that could help parameterize models that account for intraspecific varia

155 ely, similar to evolutionary processes, over-parameterized models can be simple and parsimonious, as

156 ver, uncertainty quantification (UQ) of such parameterized models has remained challenging because of

157 els perform on par with more complex, highly parameterized models in age/sex prediction across increa

158 accurate reconstructions under realistically parameterized models of bacterial evolution, and achieve

159 ethod such as a GA, leads to more accurately parameterized models that can simulate rich cardiac dyna

160 hydrocarbon degradation can be important for parameterizing models that predict the fate of marine oi

161 therapies and survival were performed using parameterized multivariable accelerated failure time mod

162 More specifically, using an empirically parameterized network model of a well-studied lake ecosy

163 se limitations, we introduce an algorithm to parameterize neural power spectra as a combination of an

164 ents in a laboratory bioreactor were used to parameterize nonequilibrium advection-dispersion-gas tra

165 A novel parameterized objective function was designed for modeli

166 Four plant functional types were parameterized on the basis of meta-analysis of plant hyd

167 otential for bias when using WUE measures to parameterize or validate models, and indicates key resea

168 Methods that do model ILS are either highly parameterized or consider a restricted set of histories,

169 We first parameterize our model and show that it accounts for mom

170 nting the matrix, and use experimentation to parameterize our model and validate model-driven hypothe

171 onte-Carlo Markov Chain (MCMC) techniques to parameterize our model using monthly time series data on

172 We parameterized our previously described mathematical mode

173 of attenuation maps using unimodal gaussians parameterized over a patient population.

174 Using our newly parameterized PARMBSC1 force field, we describe the conf

175 inference methods, using neural networks to parameterize players' goals as a dynamic mixture of Gaus

176 ow, even with limited data and without fully-parameterized population models, new insights can be gai

177 xperimentalists could develop calibrated and parameterized predictive models that inform and formaliz

178 In this study, we developed a parameterized process model and technoeconomic analysis

179 tegy termed cell-nuclear (CN) correlation to parameterize represented dynamic subcellular activities

180 Top models were used to parameterize resistance surfaces at each scale, and circ

181 gth and simulated subdaily soil hydrology to parameterize ring width increment simulations.

182 rom mechanistic processes of single roots to parameterized root processes operating at the landscape

183 A parameterized rotor-speed schedule is optimized with the

184 bly, however, we find that using a carefully parameterized, sequence-based potential to capture speci

185 ments on all species and used the results to parameterize simulations of their photosynthetic paleoph

186 Using these findings to parameterize simulations, projecting best-/worst-case sc

187 These techniques include the use of simple parameterized stimuli to precisely manipulate available

188 l stimuli that are not captured by an easily parameterized stimulus set.

189 Using a parameterized stochastic model of expansion, we find tha

190 Here, using empirically parameterized, stochastic population models for High-Arc

191 afficking in the tumor microenvironment, but parameterizing such models is difficult due to differing

192 cedure to partition the parameter space of a parameterized system of ordinary differential equations

193 We also show that this method generalizes to parameterized systems and systems that are time-varying

194 cific, brain-wide functional measurements-to parameterize the causal relationships among regions of a

195 een the laboratory microcosm studies used to parameterize the CLM4 litter decomposition and the LIDET

196 An initial aim was to parameterize the CR model using high-dose rabbit data an

197 A challenge is how to parameterize the degree of crowding of the cell interior

198 oduce so-called natural effect models, which parameterize the direct and indirect effect of a baselin

199 tabilizing selection on a gene's expression, parameterize the distribution of each gene's optimal exp

200 We parameterize the HES model, using social and ecological

201 odel that should be considered to accurately parameterize the joint distribution of the angles?

202 To facilitate practical implementations, we parameterize the kernel function in the Laplace domain b

203 We parameterize the model for Galapagos tortoises, which we

204 at the Howland Forest (ME, USA) were used to parameterize the model using a multiple constraint appro

205 We parameterize the model using experimentally measured par

206 on differed greatly from the library used to parameterize the model.

207 to the limited data available to inform and parameterize the model.

208 l of nine independent data sets were used to parameterize the model.

209 o roads, terrain shape and fence presence to parameterize the models.

210 t the level of load balancing authorities to parameterize the relationship between average or peak el

211 ly charged nanoparticles of the same size to parameterize the role of surface charge in determining n

212 The computed flux ranges are then used to parameterize the same (i.e., k-ecoli74) core kinetic mod

213 ts to decipher the underlying mechanisms and parameterize the search process.

214 pipeline performs a growth curve analysis to parameterize the unique features occurring within microt

215 We parameterized the Agro-IBIS dynamic global vegetation mo

216 We parameterized the drought response behaviour of five bro

217 wn investigations, but some have incorrectly parameterized the extrinsic incubation period (EIP) of t

218 Specifically, we parameterized the functional organization of both the th

219 We parameterized the model for the total number of infectio

220 al and environmental transmission routes and parameterized the model for two different climatic seaso

221 We then re-parameterized the model using a genetic algorithm, which

222 We parameterized the model with a comprehensive set of HER

223 When we parameterized the permeability-porosity relation using l

224 We parameterized the required population code in PC activit

225 experimental work aimed at understanding and parameterizing the effects of climate change and variabi

226 es, granulomas, and open cavities as well as parameterizing the effects of drugs on the pathogen dyna

227 By parameterizing the model with available experimental dat

228 programmes and will be of key importance for parameterizing the next generation of dynamic vegetation

229 onments in the model, or, even better, by re-parameterizing the spectra-only model to implicitly capt

230 specific combinations of these processes and parameterize them in a way that makes it difficult to el

231 lometries, and attachment to host trees) and parameterized them according to a comprehensive literatu

232 of quantitative genetic approaches that can parameterize these models to provide more meaningful pre

233 ments of CCN activation from playa dusts and parameterize these results in terms of both kappa-Kohler

234 Parameterizing these models from biological data can be

235 er of easily obtainable data are required to parameterize this mechanistic model for any endotherm, a

236 tionships by humans underscores the need for parameterizing thresholds of human- vs. climate-driven f

237 The model was parameterized to a generic North American setting (appro

238 ge-dependent gating variable rate constants, parameterized to fit experimental iPSC-CM data for all m

239 ge-dependent gating variable rate constants, parameterized to fit experimental iPSC-CM outputs We hav

240 rements and subcellular compartmentation was parameterized to fit the sucrose, hexose, and glucose-6-

241 model is independently implemented and then parameterized to identify optimal trade-offs in performa

242 ransmission within an individual-based model parameterized to match Australian conditions, explicitly

243 The model can be parameterized to match the five topological classes enco

244 Using an age-structured transmission model, parameterized to simulate SARS-CoV-2 transmission in the

245 Several model variants are parameterized to test the importance of sequence-specifi

246 A dynamic HCV transmission model was parameterized to three chronic HCV prevalence settings:

247 riation, and suggest empirical approaches to parameterize trade-offs and to make progress in this cri

248 s measure, B-relaxation distance, provides a parameterized transition between hypergraph connectivity

249 the design of future social contact surveys, parameterize transmission models of respiratory infectio

250 dition, C3 and C4 photosynthesis models were parameterized using a novel hierarchical Bayesian approa

251 h of these models is that they can be easily parameterized using basic information about the physical

252 The model was parameterized using behavioral, demographic, and clinica

253 s: it is independent of dimension, it can be parameterized using classical elastic properties (Poisso

254 -effectiveness of eight vaccination policies parameterized using country-level data from Thailand.

255 a simple model of egg-laying date evolution, parameterized using data from a population of Great tits

256 this paper we developed a mathematical model parameterized using data from the biochemistry and ecolo

257 we use a stochastic spatially explicit model parameterized using data on the spread of P. ramorum to

258 The model is parameterized using experimental data.

259 y-state equation for the six-state system is parameterized using five independent data sets and valid

260 plicit land change/carbon bookkeeping model, parameterized using high-resolution satellite time serie

261 Models parameterized using only expression data predicted expre

262 We created a simulation model parameterized using person-level longitudinal data to as

263 ltage time course of the coupled neurons are parameterized using piecewise linear functional forms, a

264 levels is poor, a mass action kinetics model parameterized using protein synthesis and degradation ra

265 Models were parameterized using published datasets reporting protein

266 The model was parameterized using systematic reviews and epidemiologic

267 neous models were created by introduction of parameterized variations in tissue excitability.

268 Using a trap design parameterized via fluid flow simulations and polymer bea

269 It is therefore also a poor basis for parameterizing water stress response in land-surface mod

270 BM up to 2025 using a HCV transmission model parameterized with Australian data.

271 s at unmonitored sites, even when a model is parameterized with data from another region.

272 Using two-sex models parameterized with data from free-living mammal populati

273 Our model, parameterized with data from insects at different latitu

274 that existing biogeochemical cycling models parameterized with data from species grown in monocultur

275 en up to 2030 using a HCV transmission model parameterized with data from the Swiss HIV Cohort Study.

276 The model is parameterized with demographic, epidemiological, testing

277 eveloped a compartmental model of TB in NYC, parameterized with detailed epidemiological data.

278 I outline how this approach can be parameterized with empirical systems and discuss how it

279 We propose a treatment response model, fully parameterized with experimental imaging data, to describ

280 The model was parameterized with experimental results in the literatur

281 l, and competition using the landscape model parameterized with forest inventory data.

282 The theory, parameterized with global averaged leaf traits and micro

283 ous medium finite element gas-exchange model parameterized with light absorption profiles, we found t

284 The model, parameterized with measured traits from chaparral specie

285 The model was parameterized with meta-analyses of previously published

286 c local computable general equilibrium model parameterized with microsurvey data, to analyze the expe

287 In contrast, models parameterized with occupancy and expression data predict

288 timates are further improved when models are parameterized with on-site counts.

289 This model, which was parameterized with on-treatment data from early phase cl

290 We hence built a model parameterized with our data to examine whether polymorph

291 A one-dimensional (1D) model, parameterized with our experimentally derived exponentia

292 Mechanistic models parameterized with parasites' thermal requirements demon

293 e ratio of the virus, R0, and the models are parameterized with preliminary data.

294 mission within an MSM population in England, parameterized with sexual behaviour, GUM attendance, HPV

295 The model is parameterized with southern Brazilian data on mosaic eco

296 The resulting model can then be parameterized with standardized data, such as the datase

297 ed at peak, we simulated a COVID-19 outbreak parameterized with the US population demographics.

298 Using a static model parameterized with these data, we estimated the effectiv

299 Once the model is parameterized with these data, we forecast treatment res

300 Using a population dynamics model parameterized with these experimental data, we predicted