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1 saccharide, trisaccharides type 2 and 6, and pentasaccharide).
2 of AT in the absence and in the presence of pentasaccharide.
3 ning oligosaccharides, a trisaccharide and a pentasaccharide.
4 oaches to the synthesis of the core N-glycan pentasaccharide.
5 studied in both the absence and presence of pentasaccharide.
6 e P-helix formation and ATIII binding to the pentasaccharide.
7 ecific ionic and non-ionic contacts with the pentasaccharide.
8 ) only approximately 2-fold tighter than the pentasaccharide.
9 t (k(2)) in both the absence and presence of pentasaccharide.
10 is more buried and fits more snugly than the pentasaccharide.
11 ed in more hydrophobic interactions than the pentasaccharide.
12 had a 5-fold higher affinity for heparin and pentasaccharide.
13 hter complex with the trisaccharide than the pentasaccharide.
14 contacts with all the sugar residues of the pentasaccharide.
15 t (k(2)) in both the absence and presence of pentasaccharide.
16 ithrombin activated by high affinity heparin pentasaccharide.
17 is also established after exposing the core pentasaccharide.
18 interactions with high affinity heparin and pentasaccharide.
19 antibodies recognizing the C. difficile PS-I pentasaccharide.
20 n make contact with a single heparin-derived pentasaccharide.
21 ay or S-layer protein is glycosylated with a pentasaccharide.
22 inked lattices between SBA and four isomeric pentasaccharides.
23 ynthesize a comprehensive library of 32 PNAG pentasaccharides.
24 factor for the syntheses of oligomers beyond pentasaccharides.
26 antithrombin by a sequence-specific heparin pentasaccharide (300-500-fold), (ii) allosteric activati
27 by complexation with a high-affinity heparin pentasaccharide abolished the serpin's ability to inhibi
31 y wild-type reactivities with thrombin after pentasaccharide activation as well as normal full-length
33 up functions as a key determinant of heparin pentasaccharide activation of antithrombin both by contr
37 It was disclosed that the conjugate of the pentasaccharide analogue of Lewis Y antigen was more imm
40 x D-sheet A interface, adjacent to the ATIII pentasaccharide and heparin cofactor-binding sites and s
42 of the biologically important ATIII binding pentasaccharide and its precursors, which differ from ea
43 syl donors allowed for the completion of the pentasaccharide and provides a synthetic strategy that i
44 4Gal-T1) in complex with a GlcNAc-containing pentasaccharide and several GlcNAc-containing trisacchar
48 s of h-M340H-beta4Gal-T1 in complex with the pentasaccharide and various trisaccharides at 1.9-2.0A r
49 ut the total syntheses of heparosan tri- and pentasaccharides and heparin di-, tetra-, hexa-, and oct
50 d antD resulted in the disappearance of BclA pentasaccharides and the appearance of a tetrasaccharide
54 tols, 3,6-disubstituted mannitol-terminating pentasaccharides, and 2-mono- and 2,6-disubstituted mann
55 , four isomeric trisaccharides, two isomeric pentasaccharides, and two isomeric hexasaccharides) as t
56 gest that PAA binds antithrombin in both the pentasaccharide- and the extended heparin-binding sites,
58 structure with that of the complex with the pentasaccharide antigen [-->2)-alpha-L-Rha-(1-->2)-alpha
59 ues implicated in the binding of the heparin pentasaccharide (Arg47, Lys114, Lys125, Arg129) provides
60 ith biomedical importance, i.e., polyanionic pentasaccharide Arixtra and polycationic peptide protami
61 ch chemokine pair was mixed with the heparin pentasaccharide, Arixtra, and assayed by ESI-FTICR mass
63 This S-layer is glycosylated with the same pentasaccharide as that of Hfx. volcanii, but the intact
65 binding of the terminal Gal residues of the pentasaccharides at identical sites in each monomer, wit
66 lution of smaller glycans (tri-, tetra-, and pentasaccharides) at low organic solvent content hampers
67 nicellular eukaryotes, Skp1 is modified by a pentasaccharide attached to a hydroxyproline near its C
68 ther protists, Skp1 is regulated by a unique pentasaccharide attached to hydroxylated Pro-143 within
69 ylation at the internal GalNAc unit of a Gb5 pentasaccharide backbone that furnishes a Neu5Acalpha(2,
70 Skp1 hydroxyproline is modified by a similar pentasaccharide, based on mass spectrometry, and that as
71 found the complex-type N-linked glycan core pentasaccharide beta-GlcNAc-(1-->2)-alpha-Man-(1-->3)-[b
72 ng-end residue D produced variable losses in pentasaccharide binding energy of approximately 15-75% b
74 , the designed activators do not bind in the pentasaccharide binding site in antithrombin resulting i
75 nd Lys139, which are outside of the putative pentasaccharide binding site, play pivotal roles in the
76 haride ligand that binds antithrombin in the pentasaccharide binding site, while it competes with ful
78 to 24%) and in the association constant for pentasaccharide binding to antithrombin [(2.6 +/- 0.3)-f
81 indicate that sulfated DHPs bind to both the pentasaccharide-binding site and extended heparin-bindin
82 n native ATIII and then becomes exposed when pentasaccharide binds to the inhibitor and activates it.
85 roduce type/group-specific Shigella flexneri pentasaccharide bricks from a single lightly protected n
86 composed of up to 15 monosaccharides using a pentasaccharide building block equipped with four orthog
87 ed non-natural disaccharide acceptor, into a pentasaccharide building block suitable for chain elonga
93 Recent determination of the structure of the pentasaccharide complex found a glycosidic linkage psi t
94 -ray cocrystal structure of the antithrombin-pentasaccharide complex shows that Trp49 does not contac
95 a recent X-ray structure of the antithrombin-pentasaccharide complex, suggested that the majority of
98 ictyostelium, Skp1 is modified by an unusual pentasaccharide containing a Galalpha1-Fuc linkage, whos
100 olysaccharide, which consists of a repeating pentasaccharide containing d-mannose, d-glucose and l-rh
101 ytic site of dGMII led to the synthesis of a pentasaccharide containing the alpha(1,6)-linked Man of
102 Lacto-N-fucopentaose III (LNFPIII) is a pentasaccharide containing the Lewis(x) trisaccharide th
103 n of antA resulted in the appearance of BclA pentasaccharides containing anthrose analogs possessing
104 e the synthesis of unnatural 6-O-sulfated CS pentasaccharides containing either a 6-O-sulfo-2-azidoga
106 ruption ofmanBcoregives rise to a deep-rough pentasaccharide core (beta-d-Glcp-(1-->4)-alpha-Kdop-(2-
107 iantennary structures with a common N-linked pentasaccharide core (mannose3-N-acetylglucosamine2), mo
109 serpin allosterically activated by a heparin pentasaccharide could be enhanced as much as 55-fold by
111 vation of the serpin antithrombin by heparin pentasaccharide DEFGH was previously shown to involve tr
114 al saccharide residues of a specific heparin pentasaccharide, denoted DEFGH, in the allosteric activa
115 ents heparin binding to FXa, the heparin and pentasaccharide dependence of FXa inactivation by AT in
116 pentasaccharide with negligible transfer to pentasaccharides derived from hyaluronan or heparan.
117 ions in an AglB-dependent manner by the same pentasaccharide detected on H. volcanii flagellins.
118 B-pentamer with the ganglioside GM1 receptor pentasaccharide diffract to near-atomic resolution.
120 N-sulfoglucosamine (GlcNS) and the synthetic pentasaccharide drug fondaparinux demonstrate the broad
121 nally activating antithrombin with a heparin pentasaccharide enhanced the affinity of the serpin for
122 n contrast to thrombin, an active AT-binding pentasaccharide enhanced the inhibition of des-PPW appro
123 Competitive binding studies with heparin pentasaccharide, epicatechin sulfate, and full-length he
126 ectroscopic studies on the 1:1 adduct of the pentasaccharide Fondaparinux (FPX) and the substitution-
130 es for two GAG model compounds, a heparin/HS pentasaccharide (fondaparinux sodium; FX) and enzymatica
131 ude low-molecular-weight heparins (LMWHs); a pentasaccharide (fondaparinux); oral anticoagulants: vit
132 r results showed that GAG model compounds, a pentasaccharide (fondaparinux, FX) and an octasaccharide
133 anti-FXa activity compared with those of the pentasaccharide, fondaparinux, and low molecular weight
134 w molecular weight heparin and the synthetic pentasaccharide, fondaparinux, had similar platelet-pote
135 afts were continuously infused with alphaGal pentasaccharide for 4-5 hr, maintaining the serum oligos
141 s of two novel tetrasaccharide and two novel pentasaccharide fragments of the Le(a)Le(x) TACA: the te
142 t the synthesis of a tetrasaccharide and two pentasaccharide fragments of the Le(a)Le(x) tumor-associ
143 cs, we report the synthesis of eight tri- to pentasaccharide fragments of these oligosaccharides.
146 ate that the nonreducing-end residues of the pentasaccharide function both to recognize the native lo
147 n that is post-translationally modified by a pentasaccharide, Gal alpha1,Gal alpha1,3Fuc alpha1,2Gal-
148 isaccharide (Galalpha1-3Galbeta1-4GlcNAc) or pentasaccharide (Galalpha1-3Galbeta1-4GlcNAcbeta1-3Galbe
149 Dictyostelium, Skp1 is modified by a linear pentasaccharide, Galalpha1-6Galalpha1-Fucalpha1-2Galbeta
150 ata to determine the solution structure of a pentasaccharide, GalNAc6S(beta1-4)GlcA(beta1-3)GalNAc4S(
152 binding interactions among CCL7, Arixtra (a pentasaccharide glycosaminoglycan [GAG] analog), and dis
155 mic data demonstrate that the native tri- to pentasaccharides have free energies of binding in the ra
156 on sites are modified with covalently linked pentasaccharides having the same mass as that modifying
158 parin enoxaparin (Lovenox) and the synthetic pentasaccharide heparin analog fondaparinux (Arixtra), w
161 ed and derivatized with a potentially linear pentasaccharide, Hex-->Hex-->Fuc-->Hex-->HexNAc-->(HyPro
162 3)-galactose epitopes were prepared, and the pentasaccharide HNK-1 required incorporation of a 3-O-su
165 ently assembled the antithrombin III-binding pentasaccharide in just 6 steps, in contrast to the appr
166 he extent of the rate-accelerating effect of pentasaccharide in the AT inhibition of the mutants was
167 tacts (approximately 75) with the Fab as the pentasaccharide, including the same number of hydrogen b
168 es are similar to the value measured for GM1 pentasaccharide, indicating that neither the ceramide mo
169 Binding of GSG4 is identical to the natural pentasaccharide, indicating that the inactive thio compo
170 or activation of factor Xa inhibition is the pentasaccharide-induced conformational change, with appr
171 loss in binding energy for the antithrombin-pentasaccharide interaction due to the disruption of a c
172 inding partner of this group on antithrombin-pentasaccharide interactions by equilibrium binding and
173 eover, we describe the successful use of the pentasaccharide intermediate in the [5 + 5] synthesis of
174 xcept for the ultimate stage, where a single pentasaccharide intermediate is converted into a set of
177 ative glycosylation to obtain the key tetra-/pentasaccharide intermediates, which was followed by ste
181 ide as that of Hfx. volcanii, but the intact pentasaccharide is synthesized on a single carrier molec
182 alpha-1,6-linked-fucose to the N-glycan core pentasaccharide, is an abundant protein modification tha
183 in chains, including the minimal AT-specific pentasaccharide, is mediated exclusively through the all
184 tiation of Co(2+)-adducted tri-, tetra-, and pentasaccharide isomers, while CID, HCD, and ETD were in
185 s the additional 6 arm GlcNAc present in the pentasaccharide, it does not serve as a key recognition
186 matic synthesis of the dolichylpyrophosphate pentasaccharide, it was thus possible to define the bioc
187 JCPyV infection of host cells requires the pentasaccharide lactoseries tetrasaccharide c (LSTc) and
189 high-affinity heparin, high-affinity heparin pentasaccharide, long-chain low-affinity heparin, and de
190 nalogues with distinct topological profiles, pentasaccharides LSTa (alpha-2,3 linkage) and LSTc (alph
191 s of epimeric disaccharides and the branched pentasaccharide Man3 glycan, demonstrating that this tec
192 stal structures of MVL free and bound to the pentasaccharide Man3GlcNAc2 at 1.9- and 1.8-A resolution
193 hat the alpha-linked mannose residues in the pentasaccharide Man3GlcNAc2 core was essential to mainta
194 onality could be readily introduced at the N-pentasaccharide (Man3GlcNAc2) core by use of azido-conta
195 and meanwhile preserving the natural, core N-pentasaccharide (Man3GlcNAc2) structure in the resulting
197 stitution at lysine 139 had no effect on the pentasaccharide-mediated activation of ATIII toward fact
203 radation system to recognize the common core pentasaccharide motif (Man3GlcNAc2) of N-linked glycopro
204 O-sulfated alpha-methyl glycoside of heparin pentasaccharide motif known to interact with the antithr
205 ts comprising the first four subunits of the pentasaccharide N-linked to the S-layer glycoprotein, a
207 viously investigated the binding of tri- and pentasaccharides of N-glycan with a GlcNAc at their nonr
208 or the fucose at the Le(x) reducing end; the pentasaccharides only lack the galactose residue at the
210 an important role in the binding of heparin pentasaccharide or in the mechanism of heparin activatio
213 nformational preorganization of the branched pentasaccharide rather than through the effect of cooper
215 th 9V and 9A PS are composed of an identical pentasaccharide repeat unit, as reported previously.
218 genes are involved in sialic acid synthesis, pentasaccharide repeating unit formation, and oligosacch
219 approach for the first total synthesis of a pentasaccharide repeating unit of Acinetobacter baumanni
220 mproved chemical synthesis protocols for the pentasaccharide repeating unit of PS-I and oligosacchari
223 -antithrombin and alpha-antithrombin+heparin pentasaccharide reported to date (2.6A and 2.9A resoluti
225 tion and previously assigned roles in adding pentasaccharide residues one to four, the composition of
227 rombin induced by binding a specific heparin pentasaccharide result in very large increases in the ra
228 al activation of the chimeras with a heparin pentasaccharide resulted in normal approximately 100-300
229 t with the altered affinities of the variant pentasaccharides resulting mostly from perturbed interac
230 ite this affinity loss, the 3-O-desulfonated pentasaccharide retained the ability to induce tryptopha
231 s two complexes with two antigen segments (a pentasaccharide Rha A-Rha B-Rha C-GlcNAc D-Rha A' and a
232 e strongly associated to the presence of the pentasaccharide sequence AGA*IA (A(NAc,6S)-GlcUA-A(NS,3,
233 antithrombin, by binding through a specific pentasaccharide sequence containing a critical 3-O-sulfo
234 it mechanism to bind with high affinity to a pentasaccharide sequence found in about one-third of hep
235 Activation occurs upon binding of a specific pentasaccharide sequence found in heparin that results i
236 s establish an important role of the heparin pentasaccharide sequence in preferential binding and sta
239 tope becomes larger across the tri-, tetra-, pentasaccharide series, entropy contributions to the fre
240 ical evidence for conventional Hbonds in the pentasaccharide sialyl Lewis-X (sLe(X)-5) between 5 and
241 The nonreducing terminal residue of the pentasaccharide side chain is the unusual sugar anthrose
244 or cooperative interactions with the heparin pentasaccharide so as to lock the serpin in the activate
245 onstrated through analysis of three isomeric pentasaccharide species and the small protein ubiquitin.
247 ng oligosaccharide acceptors indicate that a pentasaccharide, such as N-glycans with GlcNAc at their
248 P1 is variably modified by an unusual linear pentasaccharide, suggesting the localization of a novel
251 se III (LNFPIII) is a biologically conserved pentasaccharide that contains the Lewis(x) trisaccharide
252 cinetobacter baumannii 17978 revealed that a pentasaccharide that decorates glycoproteins is formed o
253 ) is a structurally homogeneous ULMW heparin pentasaccharide that is synthesized through a lengthy ch
254 st to unfractionated heparin, this synthetic pentasaccharide that mimics the unique Antithrombin III
255 ires modification of the hydroxyproline by a pentasaccharide that, in Dictyostelium, influences Skp1
256 complex of beta4Gal-T1 with I-antigen analog pentasaccharide, the beta1-6-branched GlcNAc moiety is b
257 antithrombin in the absence and presence of pentasaccharide, the difference in reactivity was increa
259 old when the serpin was activated by heparin pentasaccharide, thereby transforming antithrombin into
260 22 and Phe-121 make minimal contact with the pentasaccharide, they play a critical role in heparin bi
261 he targets included one tetrasaccharide, one pentasaccharide, three octasaccharides, and two nonasacc
262 esC) but was fully stabilized by the heparin pentasaccharide (Tm 71.8, normal 71.0 degreesC), indicat
263 Global deprotection afforded the target pentasaccharide to be used for the conversion into neogl
264 sulfo group affected both the ability of the pentasaccharide to recognize native antithrombin and its
268 l transferases needed to build the repeating pentasaccharide unit of the inflammatory glucorhamnan.
270 The type 9V capsule consists of repeating pentasaccharide units linearly arranged, with an average
271 protected H-type II blood group determinant pentasaccharide utilizing glycosyl phosphate and glycosy
273 imulation and modeling, a pertussis-LPS-like pentasaccharide was chemically synthesized for the first
276 ority of the enhanced affinity of the latter pentasaccharide was due to direct electrostatic and hydr
277 (-1) while that for binding to soluble GM(1)-pentasaccharide was found to be approximately 4 x 10(6)
280 rinux, an excellent anticoagulant heparinoid pentasaccharide, we demonstrated that l-iduronic acid ca
281 132M and K133M variants to the high affinity pentasaccharide were weakened only 2.3- and 4.5-fold res
283 tamide was fully reduced to an acetamide the pentasaccharides were obtained in four and five steps, r
284 type 2 tetrasaccharide, and the GM1 and GD2 pentasaccharides were screened against the family 51 CBM
287 hrombin in a manner identical to the natural pentasaccharide, while a novel hexasaccharide bound the
288 oprotein Asn-13 and Asn-83 are modified by a pentasaccharide, while dolichol phosphate is modified by
289 structure, common to all chloroviruses, is a pentasaccharide with a beta-glucose linked to an asparag
291 unts of GlcA residues to chondroitin-derived pentasaccharide with negligible transfer to pentasacchar
292 w significant binding to the singly branched pentasaccharide with the structure alpha-L-Rhap(1-->2)al
293 In Dictyostelium, Skp1 is modified by a pentasaccharide with the type I blood group H antigen (F
294 glycosidic linkages extending from the core pentasaccharide with thioethers amenable to construction
298 short polyanions (synthetic heparin-mimetic pentasaccharide), with the majority of the protein molec
300 optimal lipid moiety and the GM1 ganglioside pentasaccharide yielded affinities similar, within a fac