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1 de lipid tail linked to the glycan through a phosphate group.
2 pKa of the oxygen nucleophile attacking the phosphate group.
3 l group, and the presence or absence of a 5'-phosphate group.
4 two specific orientations of the bridging 3'-phosphate group.
5 ater proton is transferred to the downstream phosphate group.
6 interactions depends on the structure of the phosphate group.
7 n downstream modifications to the lipid A 4'-phosphate group.
8 galactosamine (GalN) residue linked to its 1-phosphate group.
9 also anchored to the PLP via H-bonds to its phosphate group.
10 independent of the structure of the cofactor phosphate group.
11 m a contact ion pair with the nearby anionic phosphate group.
12 tem, the Na(+) ions are localized around the phosphate group.
13 xtra OH capable of forming a H-bond with the phosphate group.
14 roxyl group but not with RNA possessing a 3'-phosphate group.
15 n water molecules mainly associated with the phosphate group.
16 e group, or a positive headgroup without the phosphate group.
17 t provides a binding motif for the dianionic phosphate group.
18 midine, underlining the critical role of the phosphate group.
19 aining neutral nucleotides with a methylated phosphate group.
20 hich converts the cyclic phosphate into a 3' phosphate group.
21 n excess of up to three positive charges per phosphate group.
22 y charged amino acids and negatively charged phosphate groups.
23 the accessibility of bulky PIs with multiple phosphate groups.
24 amples contain uncapped RNAs with exposed 5' phosphate groups.
25 ons of Mg(2+) with two or more nonsequential phosphate groups.
26 tatic/hydrogen bond contacts with quadruplex phosphate groups.
27 blets or triplets according to the number of phosphate groups.
28 reventing complete neutralization of the RNA phosphate groups.
29 ar valence angles and in the geometry of the phosphate groups.
30 in native DNA substrates containing scissile phosphate groups.
31 site as deduced from frequency shifts of the phosphate groups.
32 salt bridges with acidic residues and lipid phosphate groups.
33 chemical shifts of the three major reactive phosphate groups.
34 hydrated by interactions with additional RNA phosphate groups.
35 d to lysines that directly interact with DNA phosphate groups.
36 -4-deoxy-arabinose residues at both terminal phosphate groups.
37 ed in receptor activation interacts with the phosphate groups.
38 nt headgroup orientation for the interacting phosphate groups.
39 f long chains of covalently linked inorganic phosphate groups.
40 activation that (1) directly contact the 5'-phosphate group, (2) participate in a hydrophobic cluste
41 fferent between magnesium citrate and sodium phosphate groups (790 HU +/- 216 vs 978 HU +/- 160; P <.
42 ond is specific to the presence of a primary phosphate group, acts only through the intracellular mem
43 surface for the intense interaction with the phosphate group, allowing a "label-free" determination t
45 duce translocation, EF-G*GDP in complex with phosphate group analogs BeF3(-) and AlF4(-) promotes the
46 3% (95% CI, 64.0% to 74.2%) in the tedizolid phosphate group and 71.9% (95% CI, 66.8% to 76.7%) in th
47 % to 83.7%) of 332 patients in the tedizolid phosphate group and 79.4% (95% CI, 74.7% to 83.6%) of 33
48 5% (95% CI, 81.3% to 89.1%) in the tedizolid phosphate group and 86.0% (95% CI, 81.8% to 89.5%) in th
49 gh electrostatic interactions with the A2662 phosphate group and H-bond networks are key features of
50 27 of 708) of colonic segments in the sodium phosphate group and in 88.1% (608 of 690) in the magnesi
51 n of an oxoanion functional group, usually a phosphate group and less commonly a sulfate group, leads
52 ate by a distinct kinase to create a docking phosphate group and scaffold protein-mediated protein co
53 consistent with titration of the cofactor's phosphate group and support a model in which the major d
54 he two terminal oxygen atoms of the catalyst phosphate group and the hydrogen atoms at N and C2 of th
55 d, where one binding site interacts with the phosphate group and the other interacts with the dye.
56 e strongly dependent on the chirality at the phosphate group and the position of the methyl-group(s)
57 re, we show that DUSP11 modulates the 5' end phosphate group and/or steady-state level of several hos
58 ntains polar residues that interact with the phosphate groups and an aromatic patch that appears sele
60 lar nucleotides increased with the number of phosphate groups and ATP was the most effective cellular
61 d shed new light into coordinated motions of phosphate groups and bases in free B-DNA in solution.
62 can be grouped on the basis of the number of phosphate groups and basic residues in each peptide.
64 was clearly shown to ensure the existence of phosphate groups and nitrogen-containing ring structures
65 charged lysine and arginine residues and DNA phosphate groups and other binding sites in the minor an
66 ting that activation requires three adjacent phosphate groups and that other positions on the inosito
67 c IP(3), the relative roles of the different phosphate groups and the adenosine motif have not been e
69 e regions with high coordination between the phosphate groups and the divalent cations are discernibl
70 n interesting interactions between the RNA's phosphate groups and the Pi electrons of the peptide bon
71 effectively neutralize the charge of the DNA phosphate groups and the resulting influence on the DNA
73 gs showed absorption bands characteristic of phosphate groups, and EDX showed that the Ca/P ratios we
74 accumulation of lipid A species lacking both phosphate groups, and introduction of RlLpxQ generates p
75 arginine residues and the negatively charged phosphate groups, and thus the resulting charge neutrali
76 our oxygen-16 atoms attached to the terminal phosphate group are substituted with oxygen-18 [gamma((1
77 nd in soft source conditions, the protonated phosphate groups are fully back-exchanged in the source,
80 functional groups such as carbohydrates and phosphate groups are normally elaborated by the post-tra
82 ative b and y ions which preserve the labile phosphate groups are observed in the negative ion mode,
85 tional oligodeoxynucleotide (ODN) synthesis, phosphate groups are protected with the 2-cyanoethyl gro
86 N' are A or U and where the Palpha or Pbeta phosphate groups are replaced by boranophosphate, denote
88 '-OMe substituent and the vicinal 5'- and 3'-phosphate group, as seen in the X-ray crystal structure
89 cifically interacts with the phospho-Thr-231 phosphate group, as well as a long, disulfide-constraine
93 , generated by annealing P oligo (carrying a phosphate group at the 5' end) and T oligo (carrying a T
94 hosphoethanolamine (P-Etn) instead of a free phosphate group at the C-1 position of the lipid A backb
96 t it is the RepD covalently linked to the 5'-phosphate group at the nick that loads the helicase onto
98 Intriguingly, PGH binds to NadA with its phosphate group at the site where the carboxylate groups
99 ysine side-chain NH3(+) amino groups and DNA phosphate groups at the molecular interface of the HoxD9
100 thetic marbox in vitro was enhanced when the phosphate group between positions 12 and 13 was eliminat
102 ith phosphate mimic and three compounds with phosphate groups binding to BRCT to understand promiscuo
103 e, Lys(185) This residue interacted with the phosphate group bridging the third and fourth nucleotide
104 tiating nucleophilic attack on the ATP gamma-phosphate group by abstracting the proton from the 3'-hy
107 ood platelets contain 60-100-mer polymers of phosphate groups called polyphosphate, and when activate
108 uctures of CDK2 bound to ADP showing how the phosphate groups can be coordinated by either one or two
109 peptide fragmentation and the loss of labile phosphate groups complicate identification of the site o
112 f Tyr83 suggests that the negatively charged phosphate group could enhance the binding of positively
116 PEP) to the re side of C1(A5P), with the PEP phosphate group deprotonated, has the lowest energy barr
117 f biotin, providing strong evidence that the phosphate group, derived from decomposition of carboxyph
120 phate moiety of ImmHP is dianionic, and this phosphate group exists in two different conformations wi
122 lashes with the 5'-G*) and the less bulky 5'-phosphate group forms a H-bond to HN-Pt (indicating that
123 transferase that in vivo transfers a ribitol phosphate group from a CDP -ribitol present in muscles t
124 ymes catalyses the transfer of a substituted phosphate group from a CDP-linked donor to an alcohol ac
125 ytic mechanism that irreversibly removes the phosphate group from a phosphorylated threonine via beta
127 their basic function (i.e. the transfer of a phosphate group from the HK to its RR partner) is simple
128 omicron mutants that fail to remove a single phosphate group from their LPS were displaced from the m
130 xperimental conditions to follow the flow of phosphate groups from histidine kinases to the cognate r
132 g Coulombic interactions with two contiguous phosphate groups from the DNA backbone while the lipophi
136 sine has a direct role independent of the 2'-phosphate group in contributing toward the potency of ad
137 (31)P NMR reveals an orientation of the phosphate group in DOBMP that differs significantly from
138 f P148 (dephoso-P148) showed that the single phosphate group in P148 was responsible for the profound
139 e chain of K219, which coordinates the alpha-phosphate group in previous ground state structures, is
140 mide group as a nonhydrolyzable mimic of the phosphate group in the cognate Ub/Ubl-AMP adenylate inte
141 ions that are chelated by a common bridging phosphate group in the form Mg((a))(2+)-(O1P-P-O2P)-Mg((
142 as consistent with a tetrahedral Zn bound to phosphate groups in a monodentate inner-sphere surface c
145 at a conservative modification of one of the phosphate groups in c-di-GMP with a bridging sulfur in t
146 , including regarding the behavior of facing phosphate groups in complementary dinucleotides, and the
147 iling of mRNA cleavage products retaining 5' phosphate groups in mouse embryonic stem cells (mESCs).
148 be amorphous calcium phosphate precipitates, phosphate groups in polyphosphate that formed direct bon
149 neral surface as inner-sphere complexes, and phosphate groups in polyphosphate that were not directly
151 dictated by the number and positions of the phosphate groups in the inositol ring (with seven differ
152 nd PI(4,5)P(2) the charges of the individual phosphate groups in the molecule differ, they are equal
154 activity of this inhibitor by converting the phosphate group into a less charged phosphate prodrug.
155 beta-methylene and extension of the terminal phosphate group into gamma-esters of UTP analogues.
157 ctroscopy demonstrated that the undecaprenyl phosphate group is attached to the anomeric carbon of th
158 g(2+) and 5'-PO4 DNA, wherein the product 5' phosphate group is displaced by the NTP gamma phosphate
160 he effect on beta-hairpin structure when the phosphate group is positioned to interact with a tryptop
161 a model in which the IBE provided by the 5'-phosphate group is used to allow interactions both near
162 d phosphoehthanolamine (pEtN) at the lipid A phosphate groups, is often induced in response to specif
163 hate (polyP) is composed of linear chains of phosphate groups linked by high-energy phosphoanhydride
165 Tides, monophosphorylated acyclovir with the phosphate group masked by lipophilic groups to allow eff
166 latively high degree of solvation around the phosphate groups may contribute to the preservation of t
167 the Mn(II) ions are bound to histidines and phosphate groups, mostly from fructose-1,6-bisphosphate
169 idence that the negative charge of the A2662 phosphate group must be retained for uncompromised activ
170 mycin P inside the cap domain positioned the phosphate group next to a Mg(2+) ion present at the junc
171 cts with non-bridging oxygen atoms from each phosphate group of ATP and three water molecules than oc
172 same binding site for the 3'- and 2'-ribose phosphate group of CoA and NADP(+), respectively, but a
173 ively, with a thymine in the minor groove, a phosphate group of DNA backbone, or 5caC in the major gr
174 diester bond through transfer of LEEs to the phosphate group of DNA oligomers from the nucleobases.
176 ntation, anchored by hydrogen bonding to the phosphate group of lipids in a manner analogous to chole
178 The intrinsic binding energies of the 5'-phosphate group of orotidine 5'-monophosphate for the mu
179 by the formation of salt bridges between the phosphate group of PEP and the side chains of Lys(340) a
180 s of Crb2 serine-548 and lysine-619 with the phosphate group of phospho-H2A (gamma-H2A) are critical
181 n nanodots was identified through binding to phosphate group of phospho-tyrosine via computational ca
182 as well as modeling studies reveal that the phosphate group of pTyr99 imposes extensive steric clash
184 favorable intramolecular interactions of the phosphate group of Ser-133 with the charged groups of an
186 mplex is independent of the structure of the phosphate group of the cofactor bound to the helicase.
191 leic acid, depending on the structure of the phosphate group of the present nucleotide cofactor and p
192 thermautotrophicus, we find the "remote" 5'-phosphate group of the substrate activates the enzyme 2.
194 the P-loop, that normally interacts with the phosphate groups of ATP but is folded over a substructur
195 catalyzed by NS4B indicate that the terminal phosphate groups of ATP, GTP, and GDP are removed to pro
196 eas the coordination of Co(2+) ions with the phosphate groups of DNA and nucleotides statically quenc
197 of a complex between the negatively charged phosphate groups of DNA and the positively charged headg
201 determine the roles of the 1-, 3-, 5-, and 6-phosphate groups of inositol 1,3,4,5,6-pentakisphosphate
203 tral aminoarabinose moiety onto the negative phosphate groups of lipid A, reducing the surface charge
204 acids, arginine (Arg) and lysine (Lys), with phosphate groups of phospholipid heads using quantum mec
205 The dimetal complexes bind specifically the phosphate groups of phospholipids and add an excess of u
207 y ion-pairing between the negatively charged phosphate groups of ssDNA on the surface of the SWCNT an
208 h a positive region suitable for binding the phosphate groups of substrates and an exposed negative r
209 neo-IP(6)) and delta = 6.48 ppm (equatorial phosphate groups of the 2-equatorial/4-axial conformer o
210 NMR signals at delta = 6.67 ppm (equatorial phosphate groups of the 4-equatorial/2-axial conformer o
212 probes could be directly labeled to the free phosphate groups of the hybridized PNA/DNA heteroduplexe
213 its transport to the bacterial surface, the phosphate groups of the lipid A anchor of Escherichia co
216 s between the protonated amine of K7 and the phosphate group on S10, further enhancing the dynamic co
217 trast to these findings, P148, with a single phosphate group on serine 16, was found to inhibit calci
219 emplated primer extension and relies on a 5'-phosphate group on the distal gap strand end to confer a
220 we have determined that the presence of the phosphate group on the Kdo residue is necessary for seco
221 3'-hydroxyl on one side of the gap, and a 5'-phosphate group on the other, for the polymerase and lig
225 A novel method is reported to modify the phosphate groups on phosphoserine peptides to the corres
226 of the Rev1 BRCT domain is not to recognize phosphate groups on protein binding partners or on DNA.
229 lized by divalent cation cross-links between phosphate groups on the core oligosaccharide regions.
230 inding affinity correlate with the number of phosphate groups on the inositol ring, with phosphate po
231 ptides, or by the loss of negatively charged phosphate groups on the LPS molecule, this information i
232 istics of these conformations is the exposed phosphate groups on the periphery, which possibly could
234 in kinases (EPKs) catalyze the transfer of a phosphate group onto another protein in response to appr
236 better than the polymer containing either a phosphate group or a sulfonic acid group in terms of (i)
237 lar dynamics indicate that introduction of a phosphate group or phosphomimetic at position 26 diminis
238 roup that is composed only from the negative phosphate group, or a positive headgroup without the pho
240 enables elucidation of the minimum number of phosphate groups per copolymer chain required to promote
241 e measured for phospholipids with an exposed phosphate group: phosphatidic acid, ceramide-1-phosphate
242 2 (a metal coordinating ligand) and the oxoG phosphate group (PO4) interfere with the hydrogen bondin
243 in the gamma subunit, with their respective phosphate groups positioned near function-impairing muta
244 tion, near 1100 cm(-1), from the nonbridging phosphate groups, probes the effect of Mg(2+)-hydrate in
248 Binding of calcium cations to the lipid phosphate group reduces ordering of the water molecules.
249 cyclic changes in the length of dsDNA as the phosphate groups respond to the protein's electrostatic
250 The actual impact of adding and removing phosphate group(s) is 3-fold: changes in the local/globa
253 ensive hydrogen bonding with water and lipid phosphate groups (snorkeling) and by partial unfolding.
255 d by other macromolecules containing diverse phosphate groups, such as phospholipids and phosphorylat
256 c mitochondria with four acyl chains and two phosphate groups that have been implicated in numerous f
258 egrate the rigid base plane and the backbone phosphate group, the two nucleic acid components most re
259 surface is covered by phospholipids, having phosphate groups, therefore lipoproteins are enriched by
260 to double-stranded nucleic acids via the 5' phosphate group these fluorophores stack onto the ends o
261 ith all the base pairs of DNA (A-T; G-C) and phosphate group through hydrogen bond (H-bond) interacti
262 gnaling requires hydrolysis of inositol ring phosphate groups through the actions of PtdIns(3,4,5)P3
264 y introducing aliphatic ester arms into each phosphate group to act as lipid anchors that promote mem
265 ecting the sulfonate anion and a substrate's phosphate group to form the branched propargyl addition
266 We demonstrated that P1 Doc added a single phosphate group to the essential translation elongation
268 the contribution of the different inositide phosphate groups to catalysis, these structures provide
271 t-translational modifications (PTMs) such as phosphate groups underlie a majority of human diseases.
272 C-1 phosphate and installation of the cyclic phosphate group using an achiral phosphorus(III) reagent
275 , the oxygen-to-sulfur substitution in a DNA phosphate group was found to enhance the mobility of the
276 n amino acid residue (valine or lysine) or a phosphate group was introduced on the thiazolium side ch
278 residue (either an additional Kdo sugar or a phosphate group) was also found to be critical for secon
279 which was covalently attached at a specific phosphate group, was scanned consecutively through the D
280 ral methylphosphonate groups for anionic DNA phosphate groups weakened nonspecific DNA binding affini
281 etermined that both the bromine atom and the phosphate group were successfully substituted by means o
284 ant for IP binding to IPK1, and the 1- and 3-phosphate groups were more important for IPK1 activation
286 the compounds, although charged at the alpha-phosphate group, were taken up by the cells and released
287 uction in the gas-phase basicity (GB) of the phosphate group when bound to {LGa2}(5+)/{LIn2}(5+) comp
289 explained by high polar surface areas (e.g. phosphate groups), whereas mOat3 prefers hydrogen bond a
290 ncy of CpG (the dinucleotide CG, linked by a phosphate group), which is underrepresented in most smal
291 er shell coordination of divalent cations to phosphate groups, which we demonstrate is crucial for an
292 ere directly labeled to the free 5'-terminal phosphate groups, which were activated by EDC and imidaz
293 coiled) and attached to the substrate by its phosphate groups, while exposing its nucleobases to the
295 nate proteins, i.e., those that can exchange phosphate groups with each other, surprisingly, encounte
296 features combine negative charges of the two phosphate groups with four hydrophobic fatty acid residu
297 ding to eIF2B through direct interactions of phosphate groups with residues in eIF2Balpha and indirec
298 s of the polycation mainly interact with DNA phosphate groups, with polycation intrusion into the maj
300 ed to measure the distance between amine and phosphate groups within cell wall fragments of Bacillus