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1 clinical interventions using virological and phylogenetic analysis.
2  of VacA, m1 and m2, can be distinguished by phylogenetic analysis.
3 TCRdelta (but not IgH) rearrangements in our phylogenetic analysis.
4  viral genome was sequenced and subjected to phylogenetic analysis.
5 combination of distance-based clustering and phylogenetic analysis.
6 nto 2, 4 and 2 cluster respectively based on phylogenetic analysis.
7 ic acid gyrase (gyrB) genes and conducting a phylogenetic analysis.
8  position is robustly supported by multigene phylogenetic analysis.
9 T-PCR-positive individual and assessed using phylogenetic analysis.
10 rus deep-sequenced at sufficient quality for phylogenetic analysis.
11 uous synapomorphies for clades identified by phylogenetic analysis.
12 carcinoids and myriapods recovered in recent phylogenetic analysis.
13 Pol region consensus sequences were used for phylogenetic analysis.
14 ) are subdivided into type I and II based on phylogenetic analysis.
15 on these features and results of a multigene phylogenetic analysis, a new genus and species, Emydomyc
16               In support of RNA mutation and phylogenetic analysis, a web server (RNA-TVcurve) was de
17                                       In our phylogenetic analysis, acquisition of the definitive mam
18                                              Phylogenetic analysis across different kingdoms shows th
19                                   Systematic phylogenetic analysis allowed us to propose similar regu
20                                          The phylogenetic analysis also showed that strains involved
21                                              Phylogenetic analysis and ancestral fruit-type reconstru
22 orphic sites to RR and SR was assessed using phylogenetic analysis and Bayesian network methods.
23 logous Bacillus subtilis CopL, together with phylogenetic analysis and chemical-shift perturbation ex
24   Ligands of SLC22A15 were proposed based on phylogenetic analysis and comparative modeling.
25  sequences were available for well-supported phylogenetic analysis and could provide valuable resourc
26                                   Based on a phylogenetic analysis and enzymatic assays, we propose t
27 IGEs from 2168 genomes, along with integrase phylogenetic analysis and gene inactivation tests, revea
28                                              Phylogenetic analysis and genetic distance indices resol
29                                        Using phylogenetic analysis and molecular dynamics simulations
30 ional evolution of MS5 homologs in plants by phylogenetic analysis and molecular genetic experiments.
31 o the Saccharum and Erianthus genera through phylogenetic analysis and principle component analysis (
32               Our analysis is illustrated by phylogenetic analysis and publicly available gene expres
33                                              Phylogenetic analysis and ribosome binding experiments i
34 e-origin" variant influenza viruses based on phylogenetic analysis and sequence comparison methods.
35 ter I through IV, in the GII.P7 RdRp gene by phylogenetic analysis and the GII.14[P7] variants report
36 use the CLE domain is too short for reliable phylogenetic analysis and the pre-propeptide is too vari
37                                              Phylogenetic analysis and the presence of consensus moti
38 to two subtypes (DTEW and DTEF) according to phylogenetic analysis and the presence of highly conserv
39 c and/or genomic sequence search, subsequent phylogenetic analysis, and detailed biochemical and gene
40 were performed with hierarchical clustering, phylogenetic analysis, and principal component analysis.
41 for splicing prediction, sequence alignment, phylogenetic analysis, and structure prediction.
42 cator orthologs identified from an extensive phylogenetic analysis, and type III effector translocati
43  expression profiling, allelic diversity and phylogenetic analysis, as well as local association stud
44 -scale microbial genome characterization and phylogenetic analysis at multiple levels of resolution.
45                                              Phylogenetic analysis based on 79 craniodental and 20 po
46                                              Phylogenetic analysis based on ITS2 and COX1 genes revea
47                                            A phylogenetic analysis based on protein sequences showed
48                                              Phylogenetic analysis based on whole-genome sequencing o
49      HRV-positive samples were sequenced for phylogenetic analysis by targeting the 5' noncoding regi
50                           Thus, in practice, phylogenetic analysis can broadly identify functional de
51                                              Phylogenetic analysis can provide valuable information t
52                                            A phylogenetic analysis combined with an analysis of the s
53                                              Phylogenetic analysis comparing these 28 new encapsulin
54 ehensive, vertebrate-wide gene sampling, our phylogenetic analysis complemented with synteny analyses
55                                              Phylogenetic analysis confirmed infection with the donor
56                                              Phylogenetic analysis confirmed that these two Peromyscu
57                                          Our phylogenetic analysis confirmed the position of R. micro
58                                         This phylogenetic analysis contributes to growing evidence fo
59                      Relaxed molecular clock phylogenetic analysis demonstrated a molecular evolution
60                                              Phylogenetic analysis demonstrated high similarity with
61                                A genome-wide phylogenetic analysis demonstrated in detail the relatio
62                                              Phylogenetic analysis demonstrated that 2019 diagnoses w
63                                              Phylogenetic analysis demonstrated that 58% (7 of 12) of
64                                              Phylogenetic analysis demonstrated that all hospitals fr
65        Additionally, sequence similarity and phylogenetic analysis demonstrated that different bacter
66                                              Phylogenetic analysis demonstrated that GPC4 is most clo
67                                          The phylogenetic analysis demonstrated the lack of clonal ev
68 e heterotrophic bacterium Eudoraea adriatica Phylogenetic analysis demonstrates that the E. adriatica
69                                              Phylogenetic analysis determined a close relationship be
70                                              Phylogenetic analysis determined that Rph1 clustered sep
71 he genomic dynamics of OROV that encompasses phylogenetic analysis, evolutionary rate estimates, infe
72                                              Phylogenetic analysis found close clustering of strains
73 monella serovar detected in L. olivacea, and phylogenetic analysis from whole genome sequencing showe
74                                              Phylogenetic analysis grouped CrANT with other non-seed-
75                                Retrospective phylogenetic analysis has shown that recombination betwe
76                                              Phylogenetic analysis identified a clade of MHC-B, defin
77                                              Phylogenetic analysis identified two strains of S Enteri
78                                              Phylogenetic analysis identifies MARVs that are similar
79                                          Our phylogenetic analysis implicates NusG-dependent pausing
80                                              Phylogenetic analysis implies a recent origination of th
81                                              Phylogenetic analysis implies CRESS viruses infecting mu
82                             Our results from phylogenetic analysis, in vitro enzymatic assays, X-ray
83                                            A phylogenetic analysis including the new taxon recovers G
84          Here, we discuss the major steps of phylogenetic analysis, including identification of ortho
85                     Comparative genomics and phylogenetic analysis indicate it is a new species of Ga
86                          Genetic mapping and phylogenetic analysis indicate that the duplications giv
87                                              Phylogenetic analysis indicated that Rv2633c is a member
88                                  Last, while phylogenetic analysis indicates a bat origin of 2019-nCo
89                                              Phylogenetic analysis indicates ancestral polymorphic ar
90                                              Phylogenetic analysis indicates that the outbreak was ca
91                                              Phylogenetic analysis indicates that the San genetic lin
92                                          Our phylogenetic analysis indicates that Y. biscarpa is a st
93 novel approach to this problem, performing a phylogenetic analysis indicating that family living is a
94         Finally, OrthoFinder's comprehensive phylogenetic analysis is achieved with equivalent speed
95                                              Phylogenetic analysis is complicated by interspecific ge
96                                           In phylogenetic analysis, Kongonaphon is recovered as a mem
97 amics characterizing these processes while a phylogenetic analysis let us identify a candidate vitell
98 the airway field and NSCLCs were assessed by phylogenetic analysis.Measurements and Main Results: Gen
99 leotide dataset, implying that probabilistic phylogenetic analysis methods are needed.
100                 Using detailed time-resolved phylogenetic analysis, most of these gene segments likel
101                         Bayesian clock-based phylogenetic analysis nests this genus (Ucayalipithecus)
102                                              Phylogenetic analysis of >400 plant species in 41 genera
103                                              Phylogenetic analysis of 102 UPMC Citrobacter genomes sh
104 osteric regulation is broadly conserved, and phylogenetic analysis of 264 vertebrates shows the long
105            Here, we performed a whole-genome phylogenetic analysis of 368 IAV circulating in swine fr
106                                          Our phylogenetic analysis of 37 GET3 orthologs from 18 diffe
107                        Genome sequencing and phylogenetic analysis of 387 isolates, representing the
108                  Whole-genome sequencing and phylogenetic analysis of 388 samples across 18 individua
109                                          The phylogenetic analysis of 54 strains showed 3 distinct cl
110                                              Phylogenetic analysis of 84 distinct SARS-CoV-2 genomes
111                                            A phylogenetic analysis of 87 men who have sex with men re
112                                              Phylogenetic analysis of a concatenation of main OM comp
113                                   Subsequent phylogenetic analysis of a pericentromeric endogenous re
114                                              Phylogenetic analysis of all coding genes showed a close
115                                              Phylogenetic analysis of all IncHI2 plasmids carrying mc
116                                              Phylogenetic analysis of apple bHLH (MdbHLH) genes and t
117                          Our structure-based phylogenetic analysis of arenaviral GP1s provides a blue
118 cal contact tracing of patients and Bayesian phylogenetic analysis of bacterial WGS data were used to
119                                              Phylogenetic analysis of cancer-associated alleles and a
120                                              Phylogenetic analysis of CEK orthologs in Brassicaceae s
121                                            A phylogenetic analysis of class I RNRs suggests that acti
122  of the new family is supported by molecular phylogenetic analysis of COI and 18S datasets.
123                                         In a phylogenetic analysis of coleopteran and lepidopteran ar
124 crophiarin gene cluster into a comprehensive phylogenetic analysis of echinocandin gene clusters indi
125  angiosperms and gymnosperms were used for a phylogenetic analysis of end wall types, calculation of
126                        This was supported by phylogenetic analysis of Env sequences from viral-outgro
127 nd CISD3, Miner2) as our guides to conduct a phylogenetic analysis of eukaryotic NEET proteins and th
128                                              Phylogenetic analysis of genome sequences identified two
129 y across the genus and present a comparative phylogenetic analysis of GS evolution in diploid Heliant
130                             In recent years, phylogenetic analysis of HIV sequence data has been used
131  In agreement with ancient DNA findings, our phylogenetic analysis of HV12 and HV14, the two exclusiv
132          We undertook an epidemiological and phylogenetic analysis of isolates from all cases of shig
133                                              Phylogenetic analysis of metagenome sequences indicated
134                                              Phylogenetic analysis of more than 4000 annotated bacter
135                                              Phylogenetic analysis of morphological data proceeds fro
136                                          Our phylogenetic analysis of NCLDV metabolic genes and their
137                                          The phylogenetic analysis of NucS indicates a complex evolut
138                                              Phylogenetic analysis of our Chytridiomycota clones plac
139                                 Kingdom-wide phylogenetic analysis of over 400 CYP716s from over 200
140                                      HTS and phylogenetic analysis of paired specimens confirmed shed
141                     Comparative genomics and phylogenetic analysis of phage isolates facilitated the
142                                              Phylogenetic analysis of phytobacterial T6SS clusters sh
143 lishing, through delayed time to viremia and phylogenetic analysis of plasma virus, that treatment of
144                                              Phylogenetic analysis of plastid and mitochondrial genes
145                                              Phylogenetic analysis of pol and env sequences grouped 3
146                                              Phylogenetic analysis of pol sequences from 445 index pa
147                                              Phylogenetic analysis of pol sequences showed a cluster
148                                              Phylogenetic analysis of published datasets identified s
149 to other Ebola viruses in DR Congo, we did a phylogenetic analysis of representative complete Ebola v
150 l ribosome presented here now allow a deeper phylogenetic analysis of ribosomal components including
151                                              Phylogenetic analysis of SNAP genes from 22 diverse plan
152 r, and metastatic samples in 2 cases, enable phylogenetic analysis of spatial features of clonal expa
153                                              Phylogenetic analysis of the algal fermentative enzyme s
154                              A comprehensive phylogenetic analysis of the CBF/DREB1 family members in
155 addressed this by performing a comprehensive phylogenetic analysis of the Cdc14 family and comparing
156                                              Phylogenetic analysis of the corresponding melanin polyk
157               Here we present a large-scale, phylogenetic analysis of the distribution and determinan
158                                              Phylogenetic analysis of the DUF231 family revealed that
159                                     Temporal phylogenetic analysis of the emergence of ST69 and ST131
160 ntharia and any other cnidarian lineage, but phylogenetic analysis of the genes contained in the mito
161                                              Phylogenetic analysis of the genes of the echinocandin b
162                                              Phylogenetic analysis of the nanopore- and Sanger-derive
163                                              Phylogenetic analysis of the operon revealed that Kpi be
164      Here we describe the identification and phylogenetic analysis of the Ptr1 gene.
165                                     However, phylogenetic analysis of the RdRPs supports the previous
166                                              Phylogenetic analysis of the risk variants reveals a uni
167                                              Phylogenetic analysis of the whole genome identified a c
168                                 Results from phylogenetic analysis of these datasets differ substanti
169                                              Phylogenetic analysis of these genomes and 1011 genomes
170 evisiae scaffolds from pulque, and performed phylogenetic analysis of these sequences along with a co
171                                              Phylogenetic analysis of this new haplotype suggests tha
172                                              Phylogenetic analysis of thrips mitochondrial sequence d
173                                              Phylogenetic analysis of translation system components,
174     The aim of this study was to carry out a phylogenetic analysis of tuberculosis in Wales, United K
175                                 We performed phylogenetic analysis of viral genomes obtained from inf
176                                              Phylogenetic analysis of whole skin microbiome at differ
177                                          The phylogenetic analysis of whole-genome sequences from eac
178                                              Phylogenetic analysis on 12 microsatellite loci and 1715
179                                              Phylogenetic analysis on the eight reconstructed genomes
180                                              Phylogenetic analysis placed the majority of fungal and
181                                              Phylogenetic analysis placed tonsil-derived IAV in clust
182                                              Phylogenetic analysis places Dineobellator within Veloci
183                                              Phylogenetic analysis places Irisosaurus at the very bas
184                                              Phylogenetic analysis places Ptr1 in a distinct clade co
185                                              Phylogenetic analysis places SFV in a basal position amo
186                                          Our phylogenetic analysis places the majority of these genom
187               However, new fossil-calibrated phylogenetic analysis places their appearance at ~115 mi
188  HPG in multiple pteropid bat species, while phylogenetic analysis places these bat viruses as the ba
189                                              Phylogenetic analysis pointed to adaptations of enzyme r
190                                            A phylogenetic analysis predicts that OsONS1 branches off
191                                              Phylogenetic analysis provided further evidence that fun
192                                          The phylogenetic analysis provides compelling evidence that
193                                              Phylogenetic analysis provides further indications that
194                     In contrast to PFGE, WGS phylogenetic analysis refuted an epidemiological link be
195                     In contrast to PFGE, WGS phylogenetic analysis refuted an epidemiological link be
196                                              Phylogenetic analysis revealed 20 OsPLDalpha1 cDNA varia
197                                              Phylogenetic analysis revealed 3 clusters suggestive of
198                                              Phylogenetic analysis revealed an ascarid-specific Pgp l
199                                              Phylogenetic analysis revealed four separate emergences
200               Genomic-based similarity and a phylogenetic analysis revealed multiple clusters (n = 16
201                                 In addition, phylogenetic analysis revealed multiple independent line
202                                              Phylogenetic analysis revealed several new or rare subli
203                                              Phylogenetic analysis revealed that 3 (PhFT1, PhFT2 and
204                                              Phylogenetic analysis revealed that all NPC-EBV genomes
205                                              Phylogenetic analysis revealed that enriched microbial p
206                                              Phylogenetic analysis revealed that GH5_4 consists of th
207                                              Phylogenetic analysis revealed that lamprey GHR and PRLR
208                                              Phylogenetic analysis revealed that mollusc alpha-CA evo
209                               Importantly, a phylogenetic analysis revealed that most change has occu
210                                              Phylogenetic analysis revealed that most MDR/XDR isolate
211 generated the same phylogenetic signals, and phylogenetic analysis revealed that P. ovata formed a si
212                                              Phylogenetic analysis revealed that the ancient duplicat
213                                              Phylogenetic analysis revealed that the GAST-Cysteine Ri
214                                              Phylogenetic analysis revealed that the hemagglutinin (H
215  widely distributed in eukaryotic organisms, phylogenetic analysis revealed that their protein domain
216                           Maximum likelihood phylogenetic analysis revealed that these YFV sequences
217                                              Phylogenetic analysis revealed that they can be classifi
218                                              Phylogenetic analysis revealed that this apparently punc
219                                              Phylogenetic analysis revealed that this glycine-arginin
220                                              Phylogenetic analysis revealed that this virus branches
221                      Metagenomic binning and phylogenetic analysis revealed that two anammox populati
222              The 16S rDNA sequencing and the phylogenetic analysis revealed the close evolutionary re
223                                              Phylogenetic analysis revealed the expansion of an indig
224                                              Phylogenetic analysis reveals a wide distribution of RIT
225 n cranial morphology of G. auaritae, and the phylogenetic analysis reveals an unexpected power of res
226                                              Phylogenetic analysis reveals host specificity within ne
227                                              Phylogenetic analysis reveals that apicomplexan-like par
228                                              Phylogenetic analysis reveals that contemporary epidemic
229                                              Phylogenetic analysis reveals this bear to be basal to m
230  protein of the modification pathway, as our phylogenetic analysis reveals.
231                                          The phylogenetic analysis showed a complex clustering patter
232                                              Phylogenetic analysis showed Asp t 36 to be highly conse
233                                              Phylogenetic analysis showed distinct GII.4 variants in
234                                              Phylogenetic analysis showed most of the HRSVA sequences
235                                              Phylogenetic analysis showed that 291 of 293 isolates re
236                                              Phylogenetic analysis showed that AmeloD belongs to the
237                                              Phylogenetic analysis showed that disease flares were as
238                                              Phylogenetic analysis showed that divergent US DWV genot
239                                 Sequence and phylogenetic analysis showed that EVs of the C species (
240                                 A multi-gene phylogenetic analysis showed that H. sacchari and the ce
241                                              Phylogenetic analysis showed that in the structural regi
242                                              Phylogenetic analysis showed that RtAstV and RTCV groupe
243                                              Phylogenetic analysis showed that SHMT genes are divided
244                                              Phylogenetic analysis showed that the polymerase genes o
245                                              Phylogenetic analysis showed that, with one exception, s
246                                              Phylogenetic analysis showed this recent increase in S.
247                                            A phylogenetic analysis shows that FabIs fall into four di
248                                              Phylogenetic analysis shows that POLGARF evolved ~160 mi
249                                              Phylogenetic analysis shows the triad emerged in GPR65,
250                           Congruent with our phylogenetic analysis, slowly evolving residues were ide
251 some transmission fidelity 4 (Ctf4) based on phylogenetic analysis, structural similarities, physical
252 ural and mechanistic insights, together with phylogenetic analysis, suggest convergent evolution of p
253                                              Phylogenetic analysis suggested that SbCYP82D2 might hav
254                                              Phylogenetic analysis suggested that the CAB domain was
255                                              Phylogenetic analysis suggested that VvAHGD and its homo
256                        Finally, we present a phylogenetic analysis suggesting a likely origin for SAR
257                                              Phylogenetic analysis suggests a highly conserved nature
258 the events involved in such changes, and our phylogenetic analysis suggests a possible change from fe
259                                          The phylogenetic analysis suggests that *Lessiniabatis gen.
260                                              Phylogenetic analysis suggests that AcMYB123 or AcbHLH42
261                                              Phylogenetic analysis suggests that ERF12 is conserved a
262                                              Phylogenetic analysis suggests that MYC function first a
263                                              Phylogenetic analysis suggests that the nematodes origin
264                                              Phylogenetic analysis suggests that the transition from
265                                              Phylogenetic analysis supported close relationships amon
266                                   Finally, a phylogenetic analysis supported the notion that ZgAgaC h
267                              A comprehensive phylogenetic analysis supports the placement of A. botto
268  its relationships by designing an inclusive phylogenetic analysis that broadly incorporates definiti
269                                 We include a phylogenetic analysis that predicted that many other ins
270             Here, we present a comprehensive phylogenetic analysis that revealed deep-branching clade
271                            Likewise, through phylogenetic analysis, the evolutionary relationship of
272  several N. neivai salivary proteins and use phylogenetic analysis to compare with Old- and New-World
273 ly predict drug susceptibility profiles, and phylogenetic analysis to detect transmission between cas
274                                Then, using a phylogenetic analysis to examine actin evolution, we sho
275                         We present the first phylogenetic analysis to include musculoskeletal data ob
276          We used whole-genome sequencing and phylogenetic analysis to investigate the patterns of glo
277  Here, Grabowski and Jungers use comparative phylogenetic analysis to reconstruct the likely size of
278    Here, we combine structural modeling with phylogenetic analysis to shed light on archaeal histone
279 robe, Galvez et al. employed metagenomic and phylogenetic analysis to systemically characterize murin
280                                By conducting phylogenetic analysis, transcomplementation studies, and
281                                            A phylogenetic analysis uncovered MrfAB homologs in divers
282                                              Phylogenetic analysis using full genome sequences is mor
283                              The accuracy of phylogenetic analysis was 100%.
284                                              Phylogenetic analysis was conducted using whole genomes
285 elatedness between the isolated sequences, a phylogenetic analysis was conducted.
286 rred in the HIV-negative partner, anonymised phylogenetic analysis was done to compare HIV-1 pol and
287                                              Phylogenetic analysis was performed to assess microbial
288 osen for whole-genome sequencing (WGS) and a phylogenetic analysis was performed to detect clustering
289 fy correlates of prevalent HCV, and Bayesian phylogenetic analysis was used to examine genetic cluste
290                                              Phylogenetic analysis was used to infer partial HIV tran
291 d a C-D region "latch." Interestingly, using phylogenetic analysis, we found that these features evol
292                                      Through phylogenetic analysis, we found that these genes likely
293  In this study, based on homology search and phylogenetic analysis, we identified three homologs of A
294                                        Using phylogenetic analysis, we inferred that the newly identi
295                                          The phylogenetic analysis were done using BEAST v2.3.0 [1] .
296 to circumvent the limitations of traditional phylogenetic analysis when studying the relationship bet
297 hy images were used to perform an exhaustive phylogenetic analysis where most of the extant and fossi
298 hesis was supported by a 16S rRNA gene-based phylogenetic analysis, which identified at least one arc
299                                   We combine phylogenetic analysis with Bayesian inference under an e
300 mma) and Type-II (32 MIKCc, 2 MIKC*) through phylogenetic analysis with orthologs in Arabidopsis and

 
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