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1 piRNA biogenesis requires a specialized machinery that c
2 piRNA production commenced shortly after egg laying, and
3 piRNAs are proposed to recruit MIWI2 to the transcriptio
4 piRNAs are proposed to tether MIWI2 to nascent transposa
5 piRNAs comprise the largest group of small noncoding RNA
6 piRNAs function in transposon silencing, epigenetic regu
7 piRNAs guide PIWI proteins to cleave target RNA, promote
8 piRNAs play a critical role in the regulation of transpo
9 piRNAs protect fetal germ cells by targeted mRNA destruc
10 piRNAs silence transposons in the germ line of most anim
11 piRNAs, however, have a critical role in controlling his
12 usly identified 21U biogenesis factor PID-1 (piRNA-induced silencing-defective 1), we here define a n
15 ontain at least one P-element insertion in a piRNA cluster, indicating that repressor alleles are pro
17 g Gag, Pol, and the viral genome, but KoRV-A piRNAs are almost exclusively derived from unspliced gen
18 aying, and inactivation of the more abundant piRNA resulted in failure to degrade maternally deposite
19 first case of the establishment of an active piRNA cluster by environmental changes in the absence of
20 we provide the first evidence for an active piRNA pathway and TE repression in germ cells of human f
21 at a posttranscriptional level by affecting piRNA biogenesis through the action of the inducible cha
23 spread viral insertions, novel microRNAs and piRNA clusters, the sex-determining locus, and new immun
24 eractions drive the spatial organisation and piRNA-dependent silencing within membraneless organelles
26 l modes of interaction between ribosomes and piRNA precursors underlie the distinct piRNA biogenesis
27 results draw new parallels between snRNA and piRNA biogenesis in nematodes and provide evidence of a
30 , and function of C. elegans endo-siRNAs and piRNAs, along with recent insights into how these distin
34 nse suppresses transposition until antisense piRNAs are produced, establishing sequence-specific adap
36 targets by small guide RNAs, referred to as piRNAs or 21U RNAs in Caenorhabditis elegans In this org
39 and exhibit transposon derepression because piRNA-loaded Piwi is unable to establish heterochromatin
41 for the production of the entire MIWI-bound piRNA population and enables trimming of MILI-bound piRN
43 S-1 is not required for piRNA biogenesis but piRNA-dependent silencing: deps-1 mutants fail to produc
47 melanogaster repression of Stellate genes by piRNAs generated from Supressor of Stellate (Su(Ste)) lo
48 nd sid-1 transcripts are heavily targeted by piRNAs and accumulate in P granules but maintain express
51 ctivity of Integrator cleaves nascent capped piRNA precursors associated with promoter-proximal Pol I
58 body assembly, which competitively decreases piRNA production from the protein-coding gene transcript
60 arding the antiviral function of EVE-derived piRNAs should take into context the fact that EVEs are,
72 cific infertility but does not affect either piRNA biogenesis or the localization of MIWI2 to the nuc
78 Ago3 increase the abundance of pre-existing piRNAs, and the phased piRNA pathway, which generates st
79 xpressed during male meiosis, is crucial for piRNA biogenesis, post-transcriptional regulation, and s
81 ed for piRNA biogenesis but is essential for piRNA-directed TE de novo methylation and silencing.
82 e allowed TART-A to target the nxf2 gene for piRNA-mediated repression and that these 2 elements are
83 y a nuclear protein that is not required for piRNA biogenesis but is essential for piRNA-directed TE
85 few genes have been shown to be required for piRNA biogenesis, the mechanism of piRNA transcription r
86 SUMO E3 ligase Su(var)2-10 are required for piRNA-guided deposition of repressive chromatin marks an
87 er transcripts are specifically targeted for piRNA biogenesis by export from the nucleus to cytoplasm
90 that will help users to identify functional piRNA target sites by evaluating various information.
95 lly, we find that ZAM trapping in a germinal piRNA cluster is a frequent event that occurs early duri
96 urrent models in flies propose that germinal piRNA clusters are functionally defined by the maternal
107 data suggest that Armi initially identifies piRNA precursors in nuage/Yb bodies in a manner that dep
109 n and export complex, has been implicated in piRNA precursor export, it remains unknown how dual-stra
110 ositive selection on P-element insertions in piRNA clusters, suggesting that the rapid evolution of p
112 and declines concomitantly with increases in piRNAs, nuclear localization of HIWI2 and an increase in
116 While we observe expression of individual piRNA-pathway genes in cancer, we fail to detect the for
117 A-piRNA precursor interactions that initiate piRNA production from a second piRNA locus on chromosome
119 ll, Yu, Koppetsch, et al. describe an innate piRNA-response that specifically fragments the viral RNA
120 biogenesis machinery and that this "innate" piRNA response suppresses transposition until antisense
121 s of Tex15 causes TE desilencing with intact piRNA production, our results identify TEX15 as a new es
122 produced by transpositional insertions into piRNA clusters, genomic regions encoding the Piwi-intera
126 arboring a deletion within flamenco, a major piRNA cluster specifically expressed in somatic follicul
130 ith small RNAs that normally effect maternal piRNAs, which prevents precocious nuclear translocation
132 Daed is essential for Zucchini-mediated piRNA production and the correct localization of the ind
135 elements to nucleate the formation of a MIWI/piRNA/eIF3f/HuR super-complex in a developmental stage-s
142 in C. elegans and closely related nematodes, piRNAs are clustered within repressive H3K27me3 chromati
144 We propose that in Drosophila, the nuclear piRNA pathway has co-opted a conserved mechanism of SUMO
145 cture of piRNA production, in which numerous piRNA clusters can encode regulatory small RNAs upon tra
146 e focused on the comprehensive annotation of piRNA sequences, as well as the increasing number of piR
147 time how the unique genetic architecture of piRNA production, in which numerous piRNA clusters can e
150 ain protein, SIMR-1, as acting downstream of piRNA production and upstream of mutator complex-depende
151 s could modulate specificity and efficacy of piRNA-mediated transposon restriction, and provide a sub
152 ters, suggesting that the rapid evolution of piRNA-mediated repression in D. melanogaster was driven
153 cted small RNAs and mRNAs from the gonads of piRNA and siRNA defective mutants to high-throughput seq
162 ignatures and establish that reactivation of piRNA silencing, if at all, is not a prevalent phenomeno
163 In Caenorhabditis elegans, regulation of piRNA target genes is mediated by the mutator complex, w
168 -separated condensates that are the sites of piRNA-dependent mRNA recognition and mutator complex-dep
170 lps Rhi drive non-canonical transcription of piRNA precursors without generating mRNAs encoding trans
173 t one of the best characterized functions of piRNAs in humans is posttranscriptional mRNA silencing,
174 earch is going on to reveal the functions of piRNAs in the epigenetic and post-transcriptional regula
175 on not only as a substrate for generation of piRNAs but also as a scaffold for Yb body assembly, whic
176 -instigated genotoxic threats independent of piRNAs and differentiate, resulting in an increased func
178 quires specific base-pairing interactions of piRNAs with target mRNAs in their 3' UTRs, which activat
185 A-MYB drives transcription of both pachytene piRNA precursor transcripts and messenger RNAs encoding
188 king piRNAs from a conserved mouse pachytene piRNA locus on chromosome 6 (pi6) produce sperm with def
193 t, after birth, most post-pubertal pachytene piRNAs map to the genome uniquely and are thought to reg
196 Armi ATPase mutants cannot support phased piRNA production and inappropriately bind mRNA instead o
197 dance of pre-existing piRNAs, and the phased piRNA pathway, which generates strings of tail-to-head p
199 pong cycle localize to nuage, whereas phased piRNA production requires Zucchini, an endonuclease on t
204 ies, and we found that production of primary piRNAs from EVEs is common, particularly for EVEs locate
205 equency with which EVEs give rise to primary piRNAs generally support the hypothesis that EVEs contri
209 y physiopathology, the discovery of relevant piRNAs involved in disease processes in human skin may p
211 ive histone marks, and PIWI-interacting RNA (piRNA) are essential for the control of retrotransposon
213 perduring POE requires piwi-interacting RNA (piRNA) function and the germline nuclear RNA interferenc
214 e investigated how the PIWI-interacting RNA (piRNA) pathway engages with the membraneless organelle P
219 nterference (RNAi) and PIWI-interacting RNA (piRNA) pathways, the germline and the ASI neuron are all
220 the Piwi-interacting small interfering RNA (piRNA) pathway in gonads, while the small interfering RN
221 omponents of the PIWI-interacting small RNA (piRNA) pathway are of particular interest, as they contr
227 ophila, 23-30 nt long PIWI-interacting RNAs (piRNAs) direct the protein Piwi to silence germline tran
230 e fetal mouse testis, PIWI-interacting RNAs (piRNAs) guide PIWI proteins to silence transposons but,
231 for the biogenesis of PIWI-interacting RNAs (piRNAs) in some mosquito species and cell lines, raising
232 4) and its associated PIWI-interacting RNAs (piRNAs) instruct DNA methylation of transposable element
233 I2 and its associated PIWI-interacting RNAs (piRNAs) instruct DNA methylation of young active transpo
236 of small RNAs called PIWI-interacting RNAs (piRNAs) produced by dedicated genomic loci called piRNA
240 oys small RNA guides, Piwi-interacting RNAs (piRNAs) to identify targets of transcriptional repressio
241 NAs (endo-siRNAs) and Piwi-interacting RNAs (piRNAs), drive the repression of deleterious transcripts
242 icroRNAs (miRNAs) and piwi-interacting RNAs (piRNAs), play key roles in many biological processes.
243 lved in biogenesis of Piwi-interacting RNAs (piRNAs), the largest class of germline-enriched small no
246 somatic cells, PIWI-interacting small RNAs (piRNAs) against transposable elements are mainly produce
247 oduces abundant Piwi-interacting small RNAs (piRNAs), some of which are antisense to the nxf2 transcr
248 ns of two critical PIWI proteins in the same piRNA pathway to drive piRNA biogenesis and germ cell de
249 that initiate piRNA production from a second piRNA locus on chromosome 10, as well as pi6 itself.
251 or the left side of the figure part (showing piRNA-directed DNA methylation of mouse transposable ele
252 e germ line of most animals, whereas somatic piRNA functions have been lost, gained and lost again ac
254 equired for male fertility, but both Su(Ste) piRNAs and their targets are absent in other Drosophila
256 ew ZAM insertion into a germline dual-strand piRNA cluster and silence ZAM expression specifically in
257 Most germline piRNAs derive from dual-strand piRNA clusters, heterochromatic transposon graveyards th
265 piRNA processing also restrict U across the piRNA body with the potential to directly impact target
267 lex to the silencing effector by binding the piRNA/Piwi complex and inducing SUMO-dependent recruitme
268 r, the steps between mRNA recognition by the piRNA pathway and siRNA amplification by the mutator com
272 namely, how RNAs are chosen to instruct the piRNA machinery in the nature of its silencing targets.
274 TE transcript amounts via modulations of the piRNA and siRNA repertoires, with the clearest effects i
276 These findings reveal a critical role of the piRNA system in translation activation, which we show is
277 le perinuclear condensates in organizing the piRNA pathway and promoting mRNA regulation by the mutat
279 Importantly, our analyses suggest that the piRNA sites found by both predictive and experimental ap
282 directs proviral genomic transcripts to the piRNA biogenesis machinery and that this "innate" piRNA
284 e as sources of immunological memory via the piRNA pathway may be generalized to other arthropod spec
285 contribute to an antiviral response via the piRNA pathway, limited nucleotide identity between curre
287 uman skin, revealing that all but one of the piRNAs examined are downregulated in leprosy skin lesion
290 We found that Nxf3 specifically binds to piRNA precursors and is essential for their export to pi
291 cursors and is essential for their export to piRNA biogenesis sites, a process that is critical for g
294 ngly, USTC components bind differentially to piRNAs in the clusters and other noncoding RNA genes.
295 we investigate a previously uncharacterized piRNA biogenesis factor, Daedalus (Daed), that is locate
297 regulate global gene expression in trans via piRNA-mediated gene silencing that is essential for embr