ライフサイエンスコーパス: plant gene

1 ncRNAs throughout the structure of a typical plant gene.

2 s to downregulate the expression of a target plant gene.

3 higher degree of expansion compared to other plant genes.

4 efficient method for targeted mutagenesis of plant genes.

5 technique for characterizing the function of plant genes.

6 assessing and characterizing the function of plant genes.

7 ted shared high sequence similarity to known plant genes.

8 high salinity induce the expression of many plant genes.

9 high salinity induce the expression of many plant genes.

10 ler understanding of the number and types of plant genes.

11 fy and isolate deletion mutants for targeted plant genes.

12 mber, small size, and close association with plant genes.

13 hat are correlated with circadian control of plant genes.

14 s names for plant-wide families of sequenced plant genes.

15 e that houses intron and exon information of plant genes.

16 flanking regions of other nitrate-inducible plant genes.

17 (MITEs) recently found to be associated with plant genes.

18 limited on the role of MARs associated with plant genes.

19 quently found in and flanking many wild-type plant genes.

20 ffect of avr genes on the expression of such plant genes.

21 ctional conservation between these human and plant genes.

22 and has been instrumental in characterizing plant genes.

23 differential expression of a small number of plant genes.

24 erage a "functional map-space" of homologous plant genes.

25 make targeted sequence changes in endogenous plant genes.

26 y temperature-sensitive alleles of essential plant genes.

27 compatible interactions resulted in distinct plant gene activation (> twofold unique transcripts, 335

28 s reveals the evolution of the expression of plant genes after speciation and whole genome duplicatio

29 the global regulation of hundreds of higher-plant genes, an event that is linked to the macroevoluti

30 We present a new WWW-based tool for plant gene analysis, the Arabidopsis Co-Expression Tool

31 e genome's average and is the highest of any plant gene analyzed to date.

32 n the euchromatinization and activation of a plant gene and expand the evidence for histone code cons

33 For these reasons, understanding plant gene and genome evolution is only possible if we c

34 biquitous in plants and play a major role in plant gene and genome evolution.

35 of the genome era yielded a 'parts list' of plant genes and a nascent understanding of complex biolo

36 ed to the discovery of hundreds of imprinted plant genes and confirmed DNA and histone methylation as

37 or 1 (FAC1) is one of the earliest expressed plant genes and encodes an AMP deaminase (AMPD), which i

38 ferred from the analysis of intron phases of plant genes and from the comparison of two functionally

39 i) is widely used for functional analysis of plant genes and is achieved via generating stable transf

40 n shaping plant growth and immunity, but few plant genes and pathways impacting plant microbiome comp

41 re created to apply controlled annotation to plant genes and plant ESTs: Mendel-GFDb is a database of

42 fied functional elements in the promoters of plant genes and plant pathogens that utilize plant trans

43 edge currently exists regarding the roles of plant genes and proteins in the Agrobacterium tumefacien

44 Relatively little is known about the role plant genes and proteins play in this process.

45 enes: the SURE (sucrose response element) of plant genes and the ChoRE (carbohydrate response element

46 evidence for a specific affinity between the plant genes and their cyanobacterial homologues.

47 sequences have been identified in endogenous plant genes and there are no reports of animal virus der

48 on-coding regions that are typical of higher-plant genes and use of highly conserved gene family-spec

49 ogether, which TFs work together to regulate plant genes, and how the combinations of these TFs are s

50 ntal approaches for functional validation of plant genes, and propose haploid strategies to reduce th

51 on of the Arabidopsis CAB2, as well as other plant genes; and (3) aspects of the physiological role o

52 rning we used coding and intron sequences of plant genes annotated in the GenBank.

53 infection in whole plants and that different plant genes are involved in eliciting the HR and the loc

54 Many plant genes are known to be involved in the development

55 ethods to generate targeted modifications in plant genes are not currently available.

56 However, many plant genes are organised in multigene families that exh

57 ical roles of the vast majority of imprinted plant genes are unknown, and the evolutionary forces sha

58 In plants, genes are imprinted primarily in the endosperm,

59 anscriptomics approach to identify parasitic plant genes associated with host factor recognition and

60 a view of the evolutionary history of every plant gene at the level of sequence, gene structure, gen

61 ncing technologies capture the expression of plant genes at an unprecedented resolution.

62 Here we characterize a plant gene, Atwbc19, the gene that encodes an Arabidopsi

63 erefore, are associated with both animal and plant genes, but the identity of these elements is strik

64 regulate the expression of clock-controlled plant genes by controlling their transcription.

65 n, this gene cluster has been assembled from plant genes by gene duplication, neofunctionalization, a

66 tion overlap in the regulation of endogenous plant genes by monitoring changes in expression of appro

67 RNA silencing of endogenous plant genes can be achieved by virus-mediated, transient

68 Understanding the functions encoded by plant genes can be facilitated by reducing transcript le

69 Selectable markers derived from plant genes circumvent the potential risk of antibiotic/

70 is sp. PCC 6803 strain that expresses higher plant genes coding for a light-harvesting complex II pro

71 The plant gene complements the K. aerogenes ureG mutation, d

72 A newly identified plant gene confers partial resistance to a fungal pathog

73 posable elements, and it is likely that most plant genes contain legacies of multiple transposable el

74 HpasRNA-targeted plant genes contributed to host immunity, as Arabidopsis

75 Plant genes controlling the delivery of border cells and

76 eview catalogs and contextualizes all of the plant genes currently known to be required for SNF in tw

77 n shuffling in two important nucleus-encoded plant genes: cytosolic glyceraldehyde-3-phosphate dehydr

78 Phytome serves as a glue between disparate plant gene databases both by identifying the evolutionar

79 ut also that the regulation of this class of plant genes dates back more than 400 million years.

80 The plant gene defines an ORF of 1,218 bp that, when the pro

81 Plants genes differ from those of animals in many ways,

82 nchor genome for the grasses will accelerate plant gene discovery in many important crops (e.g., corn

83 dopsis genes can provide a powerful tool for plant gene discovery, functional analysis and elucidatio

84 he development of biotechnological tools for plant gene disruption and repair have lagged behind the

85 he first analysis of small RNA expression in plant gene dosage variants.

86 These plant gene duplicates are mostly derived from whole geno

87 Plant gene editing is typically performed by delivering

88 ure and promises to overcome a bottleneck in plant gene editing.

89 ges of realizing the opportunity provided by plant gene editing.

90 erization of amino acid substitutions in the plant gene eIF4E to evaluate the performance of these me

91 Over one-quarter of all plant genes encode proteins of unknown function that can

92 The KNOTTED class of plant genes encodes homeodomain proteins.

93 We report the characterization of a plant gene encoding a member of the BET subgroup of brom

94 tification and biotechnological utility of a plant gene encoding the tocopherol (vitamin E) biosynthe

95 ave identified three symbiotically regulated plant genes encoding a beta,1-3 endoglucanase (MtBGLU1),

96 constraint to global crop production; hence, plant genes encoding pathogen resistance are important t

97 strategy, we identified approximately 13,000 plant genes encoding peptides with common features: (i)

98 Unlike most other plant genes encoding small HSPs, expression of the RTM2

99 Plant genes encoding the subsequent steps in L-fucose sy

100 In wild type plants, genes encoding metal ion transporters, such as c

101 lections, has advanced the identification of plant genes essential for arbuscular mycorrhizal (AM) sy

102 Two newly identified plant genes establish a novel signaling feedback from th

103 tion clusters have contributed profoundly to plant gene evolution.

104 The best-characterized plant gene exhibiting a complex antisense transcript pat

105 Most plant genes express certain isoforms at a significantly

106 ant roles for only a few of the thousands of plant genes expressed during nodule development and symb

107 version pathway could be reconstituted using plant genes expressed in Escherichia coli.

108 nsider the key research questions related to plant gene expression and biology in general and highlig

109 nown to produce a wide variety of changes in plant gene expression and function.

110 is an important mechanism for regulation of plant gene expression and virus-plant interactions.

111 tion, suggesting that this feature regulates plant gene expression at multiple levels.

112 However, how MAPKs reprogram plant gene expression at the posttranscriptional level i

113 The phytochrome photoreceptor family directs plant gene expression by switching between biologically

114 set of full-length cDNAs from Salk/Stanford/Plant Gene Expression Center/RIKEN.

115 Finally, the public Plant Gene Expression Database was developed as part of

116 We apply PCGII to a plant gene expression dataset where it recovers confirme

117 ng new model for both the RNA processing and plant gene expression fields.

118 While the effects of phytohormones on plant gene expression have been well characterized, comp

119 ch may be a ubiquitous mechanism to regulate plant gene expression in response to environmental stres

120 ibility and specificity of transmission, and plant gene expression in response to phytoplasmal infect

121 To characterize plant gene expression in the establishment of the symbio

122 basis for broad-based predictive modeling of plant gene expression in the field.

123 esponses include redox-controlled changes in plant gene expression in the nucleus and organelles.

124 Plant gene expression induced by oral secretions reveale

125 Controlled down-regulation of endogenous plant gene expression is a useful tool, but antisense an

126 n that differs from traditional views of how plant gene expression is controlled.

127 ver, the global influence of this feature on plant gene expression is still largely unclear.

128 The level of DNA methylation controls plant gene expression on a global level.

129 port describes an early divergence in global plant gene expression responses caused by a rhizobial de

130 We describe a chemically inducible plant gene expression system, with negligible background

131 and Drosophila, Gal4 is not ideal for use in plant gene expression technology.

132 ified a new regulatory mechanism controlling plant gene expression that is probably generally used, w

133 he contributions by transcription factors to plant gene expression will require increasing knowledge

134 To devise a general strategy for controlling plant gene expression with artificial transcription fact

135 nitrate is a signal molecule that regulates plant gene expression, metabolism, physiology, growth, a

136 The regulation of plant gene expression, necessary for development and ada

137 erstand the regulatory networks that control plant gene expression, tools are needed to systematicall

138 ing of the regulatory mechanisms controlling plant gene expression, we report the use of single-nucle

139 d the prevalence of circadian oscillation in plant gene expression.

140 ion process that can be used to downregulate plant gene expression.

141 ion and serve as a tool to decrease specific plant gene expression.

142 onal activators that can be used to regulate plant gene expression.

143 ental stimuli are transduced into changes in plant gene expression.

144 anslational regulation plays a major role in plant gene expression.

145 ure are promising tools for the induction of plant gene expression.

146 gnate binding elements in the engineering of plant gene expression.

147 ce, suggesting a regulatory role of m(6)A in plant gene expression.

148 RNA-binding proteins are key regulators of plant gene expression.

149 as well as provide insights about endogenous plant gene-expression mechanisms.

150 Currently, plant gene families are typically identified using one o

151 This is one of the largest plant gene families that has been sequenced from a singl

152 molecular evolutionary characteristics of 25 plant gene families, with the goal of better understandi

153 n Marchantia that consists of conserved land plant gene families.

154 functional divergence of the FtsZ1 and FtsZ2 plant gene families.

155 links remain hidden within highly duplicated plant gene families.

156 acid substitution, we analyzed embryophyte (plant) gene families from TAED (The Adaptive Evolution D

157 The PlantTribes database is a plant gene family database based on the inferred proteom

158 of better understanding general processes in plant gene family evolution.

159 frequencies under continent-island models of plant gene flow to the data.

160 we present the first large-scale analysis of plant genes for CNSs.

161 Plant genes for specific fungal-plant communication, inc

162 In this survey of 5074 plant genes for their AUG context sequences, purines are

163 ch create opportunities for basic studies of plant gene function and agricultural trait manipulation

164 for comparative analysis of the evolution of plant gene function and development.

165 king, thereby frustrating efforts to dissect plant gene function and engineer crop plants that better

166 They are ideal vectors for understanding plant gene function because of their ability to cause sy

167 CRISPR/Cas9 is a versatile tool for plant gene function studies and crop improvement.

168 , adding a significant tool for the study of plant gene function.

169 es a valuable approach for new insights into plant gene functions.

170 aking directed DNA sequence modifications to plant genes (gene targeting) is at present lacking, ther

171 olecular isolation of economically important plant genes has been facilitated by the construction and

172 Several plant genes have been cloned that encode members of the

173 Although retrotransposons associated with plant genes have been identified, little is known about

174 e to dehydration' (ERD) genes are a group of plant genes having functional roles in plant stress tole

175 have been characterized as first examples of plant genes homologous to the animal trithorax genes.

176 d the avrPto-mediated signal induce a common plant gene in the elicitation of the HR.

177 flora, but little is known about the role of plant genes in establishing such associations.

178 s a powerful tool for functional analysis of plant genes in moss.

179 e recent molecular characterization of three plant genes in which mutations cause phenotypes that mim

180 plication of ancestral angiosperm (flowering plant) genes in elite cottons (Gossypium hirsutum and Go

181 A core set of plant genes, including carbohydrate, lipid-metabolism, a

182 set, the Institute for Genomic Research's 33 plant gene indices, and the entire genomes of the model

183 This study investigates the plant genes induced by harpins and the effect of avr gen

184 olves cloning a short sequence of a targeted plant gene into a viral delivery vector.

185 have identified, and are now characterizing, plant genes involved in 2,4,6-trinitrotoluene detoxifica

186 Recent studies that identified several plant genes involved in Agrobacterium-mediated transform

187 As a result, most plant genes involved in antiviral silencing were identif

188 osslinking of the cell wall, induces several plant genes involved in cellular protection and defence,

189 Plant genes involved in developmental reprogramming, wou

190 lationships and molecular interactions among plant genes involved in F. virguliforme resistance.

191 about the T-DNA integration process, and no plant genes involved in integration have yet been identi

192 active state of transgenes and of endogenous plant genes involved in physiological processes, includi

193 tional upregulation of several rhizobial and plant genes involved in S-assimilation, highlight the fu

194 gene silencing, we further demonstrate that plant genes involved in SA biosynthesis and signaling ar

195 Fewer than 20 plant genes involved in the nodulation process have been

196 n in symbiosis of a repertoire of fungal and plant genes involved in the transport and metabolism of

197 mutant, Deltayap1, was employed to identify plant genes involved in tolerance of oxidative stress.

198 ere, we show that aTI in Polgamma2 and other plant genes involves ribosome scanning dependent on sequ

199 Functional identification of plant genes is generally achieved by a combination of cr

200 Targeted downregulation of select endogenous plant genes is known to confer disease or pest resistanc

201 tants in order to understand the function of plant genes is not well documented.

202 a comprehensive insight into the function of plant genes, it is crucial to assess their functionaliti

203 In plants gene knock-outs and targeted mutational analyses

204 despread use in deciphering the functions of plant genes, mainly for dicots.

205 (K27/H3) nucleosome methylation patterns of plant genes may be gene-, tissue- or development-regulat

206 In plants, genes may sustain extensive pleiotropic function

207 By screening for plant genes mediating metal tolerance we identified a wh

208 nvestigate the function of potentially every plant gene, methods to dissect virtually any aspect of t

209 To elucidate plant gene modules commonly induced by the different end

210 ZFN-stimulated gene targeting at endogenous plant genes, namely the tobacco acetolactate synthase ge

211 dicates that Agrobacterium infection induces plant genes necessary for the transformation process whi

212 ein crucial for transcriptionally regulating plant genes needed for arbuscule development and nutrien

213 ve either been approved by the Commission on Plant Gene Nomenclature (CPGN), an organization of the I

214 ion is reflected by the absence in all three plant genes of the IRE, a highly conserved, noncoding se

215 In plants, genes of the GLUTAMATE RECEPTOR-LIKE (GLR) famil

216 nitiation sites appear to operate in several plant genes, often to expand protein targeting.

217 ng an orthology-based projection of nonmodel plant genes on the A. thaliana gene network.

218 phenotype, a manifestation of the effects of plant genes on their environment inside and/or outside o

219 enylpyruvate decarboxylases in reconstructed plant gene-only benzylisoquinoline alkaloid pathways fro

220 e not found in any other previously reported plant genes or transposons, except for apple.

221 ay be the products of transgenes, endogenous plant genes or viral RNAs.

222 ery both the public and private databases of plant genes, over 50% of the sequences flanking these Hb

223 We also explore the prediction of plant gene-phenotype associations, as for the Arabidopsi

224 y focus is to display sets of highly curated plant genes predicted to encode proteins associated with

225 Sequence comparison between the plant gene product and the yeast lysine-forming and glut

226 Understanding plant gene promoter architecture has long been a challen

227 e successfully applied to the engineering of plant gene regulation and metabolism.

228 erful tool for the in vitro determination of plant gene regulation mechanisms.

229 These results have broad implications for plant gene regulation, where intron retention is widespr

230 ng RNAs (siRNAs), are critical components of plant gene regulation.

231 ps one of the best examples of combinatorial plant gene regulation.

232 An understanding of plant gene regulatory mechanisms at a systems level requ

233 d at deciphering the overall architecture of plant gene regulatory networks are starting to realize t

234 ower genes, clear cases of exon shuffling in plant genes remain to be uncovered.

235 To identify plant genes required for successful symbiotic infection,

236 The plant genes required for the growth and reproduction of

237 Several of the plant genes required for transduction of rhizobial signa

238 2-phenylethanol to flavor and fragrance, the plant genes responsible for its synthesis have not been

239 Our studies of plant genes reveal novel transcriptional regulation duri

240 Other related plant gene sequences in maize, rice, and Arabidopsis wer

241 Using a large set of plant gene sequences we compared individual introns to t

242 vidence, the Gramene pipeline can generate a plant gene set that is comparable in quality to the huma

243 crop production is the identification of the plant genes shaping microbiota composition in the rhizos

244 nce and expression data for large numbers of plant genes should make it possible to dissect this and

245 Plant gene silencing was originally thought to be a quir

246 t homeotic genes are negatively regulated by plant genes similar to the repressors from the animal Pc

247 e a convenient and flexible means to disrupt plant genes, so allowing their function to be assessed.

248 synthesis, using the ecdysone receptor-based plant gene switch system and the ligand methoxyfenozide.

249 Our previous study using the plant gene switch system, a chemically induced gene expr

250 r-increasing number of alternatively spliced plant gene systems.

251 ost range transposable element available for plant gene tagging.

252 gus Rhizophagus irregularis and its putative plant gene target, the Medicago truncatula MtWRKY69 tran

253 ould potentially boost their application for plant gene targeting.

254 Hence, altering a plant gene that critically facilitates compatibility cou

255 fic degradation of mRNAs from the endogenous plant gene that is targeted for silencing.

256 and DNA macroarrays, we identified numerous plant genes that are differentially expressed during ear

257 ay Dundee and allows rapid identification of plant genes that are up- or down-regulated by multiple t

258 Plant genes that contain the G-box in their promoters ar

259 chocarpa in three common gardens to discover plant genes that contributed to arthropod community comp

260 Elucidating how allelic diversity within plant genes that function to detect pathogens (resistanc

261 The proportion of plant genes that have one or more alternative transcript

262 We enumerate plant genes that impart nonhost resistance and the bacte

263 orhizobium meliloti would identify regulated plant genes that likely condition key events in nodule i

264 ating regulatory variability for a subset of plant genes that may ultimately lead to evolutionary div

265 w precipitation legacy altered expression of plant genes that mediate transpiration and intrinsic wat

266 Several previously identified plant genes that play a role in immunity were found to a

267 are a viable tool for the identification of plant genes that regulate cell death.

268 Many plant genes that respond to environmental and developmen

269 agated between these elements and endogenous plant genes that share sequence homology.

270 Unlike many plant genes that undergo duplication, GalAK occurs as a

271 Here, in Spartina anglica, we identify the plant genes that underpin high-level DMSP synthesis: met

272 To facilitate the characterization of plant genes, the Cre-loxP site-specific recombination sy

273 Instead of regulating endogenous plant genes, these siRNAs are found in extracellular ves

274 otic stress activates the expression of many plant genes through ABA-dependent as well as ABA-indepen

275 effective system for functional analysis of plant genes through gene silencing.

276 w temperature induces the expression of many plant genes through undefined signaling pathways.

277 ses also activate the expression of numerous plant genes through undefined signaling pathways.

278 ion of AtNHX1 by NaCl and the ability of the plant gene to suppress the yeast nhx1 mutant suggest tha

279 The response of some plant genes to glucose analogues 3-O-methylglucose (3OMG

280 es (VEGF-A, HoxB13, and CFTR), an endogenous plant gene (tobacco SuRA), and a chromosomally integrate

281 n, regulates its own expression, and induces plant gene transcription.

282 s engineered to carry sequences derived from plant gene transcripts activate the host's sequence-spec

283 growth of the fungal symbiont; however, the plant genes underlying this process are largely unknown.

284 n for animal agriculture, BMR is a recessive plant gene usually found in annual grasses, including so

285 nal analyses of many fundamentally important plant genes via conventional loss-of-function approaches

286 trons have been inserted into vertebrate and plant genes, whereas, in other lineages, intron gain was

287 re providing knowledge about the function of plant genes with an unprecedented clarity and quantity.

288 a genuine plant photolyase gene and that the plant genes with homology to type I photolyases (the cry

289 ne of Arabidopsis is a member of a family of plant genes with similarities to bacterial membrane tran

290 In plants, genes within small duplications (<100 kb) often