コーパス検索結果 (1語後でソート)
通し番号をクリックするとPubMedの該当ページを表示します
1 embrane access channel and substrate binding pocket.
2 rbocyclic rings accessing the ribose-binding pocket.
3 formation and exhibits a deep ligand-binding pocket.
4 n a U-shaped conformation within its binding pocket.
5 membrane to enable access of drugs into its pocket.
6 rate-bound CntA help to define the substrate pocket.
7 mall molecules that bind to the TEAD central pocket.
8 d causes steric hindrance in the HIF binding pocket.
9 water molecules reached and left the binding pocket.
10 d phosphorylation near the eIF3d cap-binding pocket.
11 raction within the deep transmembrane domain pocket.
12 ine and tyrosine residues within the binding pocket.
13 targeted via their hydrophobic, orthosteric pocket.
14 he stem region or to the sialic acid-binding pocket.
15 ineates a largely hydrophilic client protein pocket.
16 tricted by R295(7.40) in the agonist-binding pocket.
17 t lead to the deformation of the GDP-binding pocket.
18 point to these compounds binding in the ATP pocket.
19 a previously undescribed allosteric binding pocket.
20 that can be targeted in the region of the L2 pocket.
21 vation through occupation of the specificity pocket.
22 drogen-bonding interactions in a hydrophobic pocket.
23 and 3D shape complementarity for the binding pocket.
24 trol the accessibility of the anti-apoptotic pocket.
25 y lead (12) revealed a potential new binding pocket.
26 cating the volume of the preQ(1)-recognition pocket.
27 domain stabilizing the S1 substrate-binding pocket.
28 71, Tyr-87, and Phe-89 at the center of this pocket.
29 by a shallow epitope lacking defined binding pockets.
30 lity (BBBP), and the targeting of allosteric pockets.
31 cted to lead to the formation of small Fermi pockets.
32 ing because they lack small-molecule binding pockets.
33 that encircle the portal to their non-polar pockets.
34 use and the number of teeth with periodontal pockets.
35 ets and the presence of deepened periodontal pockets.
36 lenge owing to the largely identical binding pockets.
37 sional channel connected to three peripheral pockets.
38 come by targeting unique residues or binding pockets.
39 % for nucleotide- and 91.3% for heme-binding pockets.
40 contacts with 2 distinct negatively charged pockets.
41 , the L2 loop, or somewhere in between these pockets.
42 es that have dipeptides bound in the A and F pockets.
43 s are component parts of the peptide-binding pocket 7 (P7) of the HLA-DR heterodimer, suggesting that
45 ersible bond with Cys 215 in the ATP-binding pocket, a residue that is not present in human CLK1, the
46 that the KoH body has a much deeper binding pocket, allowing MBG to be held 4 angstrom further down
48 lecules confined within hydrophobic reaction pockets alters the energetics of adsorption and catalysi
52 to participate in covering the NADH-binding pocket and establishing the water channels that connect
53 RJW100 adopts multiple configurations in the pocket and fails to make an interaction critical for act
55 DR3beta loop anchored proximal to the MR1 A'-pocket and mediated direct contact with the 5-OP-RU anti
56 maintains indirect interactions with the ATP-pocket and mediates a critical salt bridge with a glutam
58 by inhibitors that occupy an "alkyl-induced" pocket and possess bicyclic hinge-binding motifs capable
59 tranexamic acid conjugates targeting the S1 pocket and primed sites, substrate-analogue linear homop
60 pyridyl ethers directed into the hydrophobic pocket and small carbocyclic rings accessing the ribose-
61 ontains an intramembrane cholesterol-binding pocket and that interaction with cholesterol may regulat
64 P) molecules remodels both the ISRIB-binding pocket and the pockets that would engage eIF2alpha durin
65 of teeth with deepened (>=4 mm) periodontal pockets and the presence of deepened periodontal pockets
66 t enhances affinity to the substrate-binding pocket, and fine-tuning of the chemical composition of t
67 ing defects (i.e., cavities including voids, pockets, and pores) are prevalent in membrane-integral e
68 ructure-level analysis showed ligand binding pocket architectures differences in size, shape and elec
69 The electrostatic properties across the S1 pocket are further attenuated by charged Glu192 at the r
72 isations in logarithmic (mainly in flagellar pocket area and endosomes) and late stationary phase (mi
73 BigDyn modulates ASIC1a, identify the acidic pocket as the binding site for BigDyn, and thus highligh
74 nteractions of the ligand with a hydrophobic pocket at the interface of the second extracellular loop
75 ne compound (NITD-434) induced an allosteric pocket at the junction of the fingers and palm subdomain
76 N-terminus inserting into the ligand binding pocket at the transmembrane bundle of the receptor, whic
77 onoiNet also computes significance scores of pocket atoms, called BionoiScores, to provide meaningful
78 the morphology and function of the flagellar pockets between different trypanosomatids, with their li
80 ovalently target the cysteine in the central pocket, block the interaction with coactivator yes-assoc
82 is substitution disrupts cGMP binding to the pocket, but it also unexpectedly causes PKG1 to have hig
84 at compound 5 did not reach highly conserved pocket C and established interactions with the semiconse
85 active site, including the interaction with pocket C, a region not commonly exploited by previously
86 nges in the 220-loop of the receptor-binding pocket caused similar interactions with human receptor a
87 distinctive interactions within the binding pocket, causing unique allosteric effects in the enzyme.
88 -band Fermi surface, consisting of both hole pockets centred at (pai, 0) and electron pockets centred
90 cal attachment level (CAL) gain (>=3 mm) and pocket closure (post-surgery probing depth [PD] <= 4 mm)
93 ically relevant CAL gain was associated with pocket closure, and failing when either clinically relev
95 mic face is a structure called the flagellar pocket collar (FPC), which is essential for FP biogenesi
96 s the existence of an optimal ligand-binding pocket conformation for capsaicin-mediated TRPV1 activat
97 nse variants localized to an electronegative pocket considered critical for back-to-back binding of d
98 ng to a partial collapse of the conserved S1 pocket, consistent with the first and controversial crys
99 aled unrestricted nonprime substrate binding pockets, consistent with the broad substrate specificity
100 Epa family members are lectins with binding pockets containing several conserved and variable struct
104 hresholds of patient income levels or out-of-pocket costs that predict risk of financial toxicity are
105 drugs among patients with the highest out-of-pocket costs, without detectable increases in health-pla
107 containing active sites or molecule-binding pockets could interact with short, structured RNA molecu
108 kers direct the capping group toward shallow pockets defined by the L1 loop, the L2 loop, or somewher
109 an synthesis, affinity assays, sugar binding pocket deletions, site-directed mutagenesis, and constru
114 nts associated with >= 6 mm residual probing pocket depth (PPD) were included and randomly assigned t
115 Pre- and post-therapy clinical (probing pocket depth [PPD], clinical attachment level [CAL], gin
116 imilar when stratified on baseline levels of pocket depth, gingival bleeding, ACH, and smoking status
118 Furthermore, clinical parameters (Probing Pocket Depths, Bleeding On Probing, Plaque Index) and ma
119 whether alcohol use predicts the periodontal pocket development over an 11-year follow-up period.
120 e activity, and mutating Dnmt5's ATP-binding pocket disproportionately reduces ATPase stimulation by
121 bic residues in the [4Fe-4S] cluster binding pocket, distinct from previously characterized canonical
122 folded at high temperatures and exhibit more pocket diversity than naturally occurring NTF2-like prot
124 ibiotic activity by restraining drug-binding pocket dynamics, rather than preventing antibiotic bindi
125 and occupies the orthosteric ligand-binding pocket enabled by a conformational change that doubles t
126 [as percentage of GDP], private, and out-of-pocket expenditure on health [both as percentage of curr
128 gation of short peptides which offer binding pockets exposed with arrays of imidazoles and lysines.
129 Reduced occupancy of a particle-stabilising pocket factor in the complexed virus and the presence of
130 ishes stronger binding interactions with the pocket, favoring menaquinone for charge transport in T.
131 ed of 12 HSP27 dimers with a phosphorylation pocket flanked by serine residues between their N-termin
138 ll SCs, independent of the CIV isoform, in a pocket formed by Cox1, Cox3, Cox12, and Cox13, away from
139 om one Ig1 domain inserts into a hydrophobic pocket from the opposing Ig1 domain producing an interac
140 be due to the emergence of a new hydrophobic pocket generated by the insertion of the six amino acid
141 e and a lysine residue in the ligand binding pocket (GluN2D-Met763/Lys766, GluN2C-Met736/Lys739) are
143 Here, we report efforts to exploit a cryptic pocket (H95/Y96/Q99) we identified in KRAS(G12C) to iden
145 ), providing two pincer-type {N(3) } binding pockets, has been reported to readily eliminate H(2) and
146 the structural disorder and lack of binding pockets have made design of small molecules for transcri
148 ocket, supporting the suggested role of this pocket in DNA packaging for the Dependoparvovirus The st
150 ta3Arg-309) helices located at the base of a pocket in the beta(+)-alpha(-) subunit interface that ex
152 (R175H) proteins, identified the interacting pocket in the DNAJA1-mutp53(R175H) complex, and found on
153 suitability of the agonist-bound orthosteric pocket in the MT receptor structures for the structure-b
154 conserved tryptophan (W571) from its typical pocket in these Env mutants renders the Env insensitive
155 d an unpredicted non-peptide agonist-binding pocket in which reorganization of extracellular loop 3 a
156 ces between shallow and residual periodontal pockets in patients with periodontitis (Stages III and I
158 l structures reveal two S-citalopram binding pockets in the central binding (S1) site and the extrace
159 compound F0045(S) confirmed that it binds to pockets in the HA stem similar to bnAbs FI6v3 and CR9114
160 uanidino-benzimidazoles to target the opened pocket, including a dihydro-imidazoquinazoline with a pr
163 covalently binds with FMN and Cu(II)-binding pocket is located at the interface of the NfoR dimer.
164 emokine N terminus with the receptor-binding pocket is the key driver of signaling, the signaling amp
166 of activators binds IRE1 in the kinase front pocket, leading to a distinct conformation of the activa
167 tructures have a lower number of hydrophobic pockets, leading to a lower capacity to entrap hydrophob
168 ding prevents local unfolding of the Hb heme pocket, leaving IsdH unable to wrest the heme from Hb.
170 IF with three prediction challenges: protein pocket-ligand prediction, protein-protein interaction si
171 mine (5-HT) (i.e., serotonin) to the binding pocket located on the extracellular domain (ECD) and all
172 he inhibitor into a SULT1A3-specific binding pocket located outside the active site, and a side chain
173 observed in percentage of both healthy PPDs (pockets < 5 mm) and converted pockets (sites no longer r
174 er identify which factor (CAL gain, residual pocket) mainly contributed to determine a treatment fail
179 patients' perspectives on discussing out-of-pocket medication costs with clinicians, 49 adults, aged
180 with glycine in the zebrafish MetRS-binding pocket (MetRS-L270G), we enabled the cell-type-specific
181 way for large-scale synthetic preparation of pocket-modified vancomycin analogues that directly addre
184 cover prevalent epistasis within the binding pocket of a human G protein-coupled receptor (GPCR) yiel
187 row Drude peak from a high-mobility electron pocket of double Weyl quasiparticles, and the temperatur
188 nionic amino acids surrounding the catalytic pocket of DspB in PNAG substrate recognition and hydroly
189 s structural hot spots in the ligand binding pocket of Epa proteins is a main driver of their functio
191 of a 3' terminal Uridine into the catalytic pocket of Nbr EXO indicates that 2'-O-methylation of the
193 f the catalytic subunit Isw1 with the acidic pocket of nucleosomes and the accessory subunit Ioc3 wit
194 s FXIII was topically applied into the wound pocket of rats, eleven adhesive failures occurred betwee
195 top SNP encodes p.Met76Val in the P4 binding pocket of the HLA class II gene HLA-DPB1 (rs1042151A>G,
197 rved interactions at the specificity binding pocket of trypsin and trypsin-like proteins from Serine-
199 es thus foreshadow the generation of binding pockets of advanced proteins and have the potential to c
201 een the catalytic site and the sugar-binding pockets of domain V and contributing to a processive elo
203 n of interactions in the S1, S1beta, and S1' pockets of FXIa through a combination of structure-based
204 Bacteria-like morphology was identified in pockets of human fetal meconium at mid-gestation by scan
207 ng is crucial in the greater Atlanta area as pockets of poverty and old housing put some children at
210 mental surveillance reveals importations and pockets of unimmunized children that dictate intensive t
211 ture, an "intrinsic ligand," and hydrophobic pockets off a pore cavity that is surprisingly small.
213 six residues of P11 inserted into a shallow pocket on Stx2A1 and interacted with Arg-172, Arg-176, a
216 small molecules ICCB-19 and Apt-1 bind to a pocket on the N-terminal TRAF2-binding domain of TRADD (
221 [7%] patients), implantable pulse generator pocket pain (five [4%]), and muscle spasm or cramp (thre
224 Maryland - passed legislation to cap out-of-pocket payments for specialty drugs at $150 per prescrip
230 eriodontitis (PPD = 5 to 8 mm) in at least 2 pockets per contralateral quadrants within the same arch
231 past two decades, but residual transmission pockets persist across the Amazon Basin, where Plasmodiu
232 catastrophic expenditures, defined as out-of-pocket plus premium spending exceeding 19.5% of family i
234 ors (missing teeth, percentage of sites with pocket probing depth >=6 mm, and mean pocket probing dep
235 s with pocket probing depth >=6 mm, and mean pocket probing depth) had an area under the curve (AUC)
239 ues (R141A/R397A) within the (E)FtsN-binding pocket reduced the activation of PBP1b by FtsN but not b
241 M originally residing in the N(2) S(2) (4-) pocket, replaced by protonation at the amido nitrogens,
242 healthy PPDs (pockets < 5 mm) and converted pockets (sites no longer requiring surgical treatment);
244 The primary outcome was the change in out-of-pocket spending among specialty-drug users who were in t
245 forms must place emphasis on reducing out-of-pocket spending for patients with multimorbidity to prov
247 We evaluated 3 main outcomes: (1) out-of-pocket spending, (2) premium contributions, and (3) like
248 o $406; P = .001) increase in patient out-of-pocket spending, but no significant changes in total hea
249 e gelling solvent situated in the "molecular pocket" stitches the gelators through weak H-bonding int
252 the previously described nucleotide-binding pocket, supporting the suggested role of this pocket in
253 oups of some compounds occupy a water-filled pocket surrounding an nNOS-specific aspartate residue (a
254 he amino acid side chains lining the binding pockets switch in a coordinated fashion between a peptid
255 together with Thr-35 of WW1, form a binding pocket that accommodates a polyproline stretch within th
256 large, membrane-accessible substrate-binding pocket that alternately faced the ER lumen and cytosol a
257 the presence of a secondary sulfate-binding pocket that could be exploited in the design of future i
258 tional change in residues of the FMN-binding pocket that display peptide-bond flipping upon NAD(+) bi
259 modes of binding in the (DHQD)(2)PHAL chiral pocket that explain the system's remarkable control over
264 but they also highlighted a common backside pocket that the UbVs used for enhanced affinity and spec
265 structural features of the substrate-binding pocket that underlie the divergent evolution of substrat
266 ted and drugged with antibodies, they harbor pockets that are only accessible to small molecules and
267 models both the ISRIB-binding pocket and the pockets that would engage eIF2alpha during active nucleo
268 an interconnected surface frame containing 'pockets' that house highly water-repellent and mechanica
269 with the inhibitor Lys(32) in the trypsin S1 pocket, the inhibitor C-terminal residue Ser(33) cleavag
270 small molecule occupancy of protein binding pockets, thus creating the potential to modulate human b
272 er, D(2)R(spi) exhibited an extended binding pocket to accommodate spiperone's phenyl ring, which pro
273 triterpenoid glycosides within a new binding pocket to characterize the structure-activity relationsh
275 allows ligands in the extracellular binding pocket to favor either of the two intracellular conforma
277 f key residues connecting the ligand-binding pocket to the G(s)-coupling site, and a specific interac
279 t packing in and the shape of the peripheral pockets, to afford large changes in the global pore geom
280 targets used, the wider range of target and pocket types, and the diversity of therapeutic areas exp
282 transduction between the ATP and RNA binding pockets using molecular dynamics simulations and enzymat
283 ic residues in two consecutive sugar-binding pockets (variant DSR-OKDelta1-Y1162A-F1228A) induced qua
285 rogen bonding interaction with Thr599 in the pocket was achieved with a tertiary amide moiety, confir
286 ing site 20 angstrom away from the catalytic pocket was identified, and its potential participation i
287 n in silico screen of the MR1 ligand-binding pocket, we identify one ligand, 3-([2,6-dioxo-1,2,3,6-te
288 osed paralimbal, curved self-sealing scleral pockets were made 3 mm away from the limbus along with a
289 ar conformation to the P4-P6 peptide binding pockets, whereas clozapine N-oxide, which did not activa
290 Z complex reveals a hydrophobic FtsZ-binding pocket, which defines the SepF homodimer as the function
291 n summary, in the environment of periodontal pockets, which are bathed in gingival crevicular fluid c
292 ble within the ostensibly identical cavitand pockets-which differ only in the presence and/or positio
293 defines the size and shape of the catalytic pocket, while the pai-methyl-l-histidine (Pmh) moiety tr
294 e in fusogenic activity via a Ca(2+) binding pocket with conserved glutamic acid (E) and aspartic aci
295 he backbone as well as forms the SAM-binding pocket with its three distinctive loops, affect the bind
297 Criticality is known to occur in "hot" Fermi pockets with a high density of states close to the Fermi
298 ng as a deep, sterically limited hydrophobic pocket, with the outward pointing piperidine moiety bein
299 spase-1 L2 and L2' loops bound a hydrophobic pocket within the GSDMD C-terminal domain distal to its
300 o both the "selectivity" and "alkyl-induced" pockets within the adenosine triphosphate (ATP) binding