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1 ing of human alpha-globin pre-messenger RNA (pre-mRNA).
2 moves introns from messenger RNA precursors (pre-mRNA).
3 xpression of RBPs, which interact with sad-1 pre-mRNA.
4 etween U2 snRNP and branch point (BP) on the pre-mRNA.
5 sites (PA-sites) at the terminal exon on the pre-mRNA.
6 eventing the association of NOVA1 with hTERT pre-mRNA.
7 ractions of spliceosomal components with the pre-mRNA.
8 ice site, and the branchsite (BS) of nascent pre-mRNA.
9 otic mRNAs requires splicing of introns from pre-mRNA.
10 as a single promoter that generates a single pre-mRNA.
11 nRNPs and the U2 snRNA is base-paired to the pre-mRNA.
12 ecreased transcription and processing of Asc pre-mRNA.
13 n intronic and exonic sequences of regulated pre-mRNA.
14 ing the association of splicing factors with pre-mRNA.
15 by the direct binding of ADAR3 to the GRIA2 pre-mRNA.
16 leoprotein complex that removes introns from pre-mRNAs.
17 itutive and alternative splicing of selected pre-mRNAs.
18 ng to U1-70K to induce splicing of lipogenic pre-mRNAs.
19 ol II termination of lincRNAs as compared to pre-mRNAs.
20 2- and U12 spliceosomes occur within nuclear pre-mRNAs.
21 gly increase the levels of the corresponding pre-mRNAs.
22 and U7 snRNA in 3' end processing of histone pre-mRNAs.
23 s well established that canonical eukaryotic pre-mRNA 3' processing is carried out within a macromole
29 L1 variations, some of which induce aberrant pre-mRNA AIPL1 splicing leading to the production of alt
33 ve feedback loop, in which RBP binds its own pre-mRNA and causes alternative splicing to introduce a
34 ectly bridges the 5'-exon and intron 3'SS of pre-mRNA and promotes exon ligation, as shown by functio
35 ceptor via its ability to base pair with its pre-mRNA and regulate alternative RNA splicing and/or A-
36 tein, participates in the processing of this pre-mRNA and so controls capsid gene access via its role
38 ated by a productive interaction between the pre-mRNA and the U1 snRNP, in which a short RNA duplex i
41 vage factors IA and IB, which bind substrate pre-mRNAs and CPF, likely facilitating assembly of an ac
44 f mRNAs, a concomitant increase of unspliced pre-mRNAs and the disappearance of the trans-splicing Y
45 confirmed the capture of pre-messenger RNA (pre-mRNA) and exposed distinctions in diversity and abun
46 sembly of the spliceosome on precursor mRNA (pre-mRNA) and extensive remodelling to form the spliceos
47 ore or soon after exon definition in nascent pre-mRNA, and while m(6)A is not required for most splic
48 ciation and translocation of UPF1 on nascent pre-mRNAs, and cells depleted of UPF1 show defects in th
49 animal cells, replication-dependent histone pre-mRNAs are cleaved at the 3' end by U7 snRNP consisti
50 NAs) produced from back-splicing of exons of pre-mRNAs are widely expressed, but current understandin
51 scribed eukaryotic precursor messenger RNAs (pre-mRNAs) are processed at their 3' ends by the 1-megad
52 cking the binding of splicing factors to the pre-mRNA, are a promising therapeutic modality to treat
53 nd to non-adenylate RNA classes (tRNA, rRNA, pre-mRNA) as well as the vast majority of species that l
55 the small RNA-binding Argonaute NRDE-3, the pre-mRNA associated factor NRDE-2, and the HP1-like prot
56 ly, intron-targeted ASOs reduce the level of pre-mRNA associated with chromatin to a greater extent t
58 is analysis discovers novel modes of U2snRNA:pre-mRNA base-pairing conserved in yeast and provides in
60 on many substrates, including pre-rRNAs and pre-mRNAs, binding specificity is apparently conferred b
61 say that mimics molecular recognition of tau pre-mRNA by a U1 small nuclear ribonucleoprotein (snRNP)
63 ptophan residue in the loop was required for pre-mRNA capping in the step of the covalent enzyme-pRNA
67 ere, we show that reconstitution of specific pre-mRNA cleavage with recombinant yeast proteins requir
68 -dependent histone precursor messenger RNAs (pre-mRNAs) contains the U7 small nuclear ribonucleoprote
69 enylation (polyA) sites near the 3' end of a pre-mRNA create multiple mRNA transcripts with different
73 blockage of m(6)A inhibited splicing of the pre-mRNA encoding the replication transcription activato
74 mic genome-wide alternative splicing (AS) of pre-mRNAs encoding regulators of peptidergic secretion w
75 inds G tracts within nascent precursor mRNA (pre-mRNA), especially within predicted G-quadruplex stru
77 uires Slu7, which interacts dynamically with pre-mRNA first, and then interacts stably with the 3'-ex
80 ins that deaminate adenosines to inosines in pre-mRNA hairpins and also exert editing-independent eff
81 argeted ASOs achieve full activity after the pre-mRNA has undergone splicing, but before the mRNA is
82 and physical characteristics of mis-spliced pre-mRNAs highlighted conserved properties, including le
85 d to rescue disease-relevant splicing of tau pre-mRNA in a variety of cellular systems, including pri
86 e compounds are shown to directly target tau pre-mRNA in cells, via chemical cross-linking and isolat
88 to correct splicing of survival motor neuron pre-mRNA in the cortex and striatum after intracerebrove
89 ous U7 snRNP, and accurately cleaves histone pre-mRNAs in a reconstituted in vitro processing reactio
90 regulator that supports splicing of selected pre-mRNAs in an intron-specific manner in Schizosaccharo
92 We show that FTO binds preferentially to pre-mRNAs in intronic regions, in the proximity of alter
93 ing (SLTS) plays a part in the maturation of pre-mRNAs in select species across multiple phyla but is
94 ation regarding the regulatory properties of pre-mRNA, including the RNA secondary structure context.
98 -kappaB subunit-dependent reduction in eEF2K pre-mRNA, indicating that NF-kappaB activation represses
102 ing sites within the primary sequence of the pre-mRNA is a predictor of 5' splice site usage, with th
104 liced leader (SL)-mediated trans-splicing of pre-mRNAs is an obligatory step in gene expression, and
106 atalyzed process by which pre-messenger RNA (pre-mRNA) is processed to mature mRNA, is altered in a n
107 at generates two or more mRNAs from the same pre-mRNA, is largely controlled by splicing regulators,
108 factor NOVA2, which binds directly to L1CAM pre-mRNA, is necessary and sufficient for the skipping o
109 re alternative splicing of the 3' end of the pre-mRNA leads to the production of 3 validated ERR-beta
117 alysis revealed that alternative splicing of pre-mRNAs of 558 genes, including the autophagy-related
119 by ensuring correct alternative splicing of pre-mRNAs of critical glycolytic genes such as GLUT1 and
120 ncRNAs) undergo the same maturation steps as pre-mRNAs of protein-coding genes (PCGs), but they are o
122 directionally from gene promoters to produce pre-mRNAs on the forward strand and promoter upstream tr
124 on of the hexanucleotide AAUAAA motif in the pre-mRNA polyadenylation signal by the cleavage and poly
126 ation of the serotonin 2C receptor (5-HT2CR) pre-mRNA potentially leading to a reduction in 5-HT2CR f
130 inks H2Bub during transcript elongation with pre-mRNA processing at CCA1 Furthermore, the presence of
131 rate that inhibition or slowing of canonical pre-mRNA processing events shifts the steady-state outpu
134 indicated that CDK12 directly phosphorylates pre-mRNA processing factors, including those regulating
135 , interfere with host gene transcription and pre-mRNA processing genomewide and contributes to the sp
137 on microscopy and ability to support histone pre-mRNA processing in the presence of polyadenylation f
138 We reconstituted an active human histone pre-mRNA processing machinery using 13 recombinant prote
142 at a full understanding of such dysregulated pre-mRNA processing requires study of snRNAs, as well as
143 onal patterns of divergent transcription and pre-mRNA processing, including intron splicing and 3' cl
150 tion occurs co-transcriptionally and impacts pre-mRNA processing; however, the mechanism of co-transc
153 with higher affinity to the splicing factor pre-mRNA-processing factor39-1 (PpPRP39-1) in the presen
154 y alternative splicing of full-length P2RX7A pre-mRNA, producing isoforms that delete or retain funct
156 x5, that interferes with splicing of TMPRSS2 pre-mRNA, resulting in the expression of enzymatically i
159 immediately upstream of the introns contain pre-mRNA-specific splicing enhancers, the substitution o
163 he cell cycle and describe its dependence on pre-mRNA splicing and accurate alternative splicing.
164 ic repeats/Cas9 and effecting alterations in pre-mRNA splicing and by manipulating expression levels
166 nstrate that H2A.Z is required for efficient pre-mRNA splicing and indicate a role for H2A.Z in coord
167 ely spliced MyD88 form is due to alternative pre-mRNA splicing and not caused by another RNA regulato
168 s across eukaryotes, play important roles in pre-mRNA splicing and other post-transcriptional process
170 his mutation results in aberrant beta-globin pre-mRNA splicing and prevents synthesis of beta-globin
171 ons of SR (serine/arginine-rich) proteins in pre-mRNA splicing and processing are modulated by revers
172 (eU1s) have the unique ability to reprogram pre-mRNA splicing and restore exon 7 inclusion in SMN1 c
178 e DEAH-box helicase Prp43 is a key player in pre-mRNA splicing as well as the maturation of rRNAs.
180 an essential role of m(6)A in regulating RTA pre-mRNA splicing but also suggest that KSHV has evolved
181 ce of the coordinated control of alternative pre-mRNA splicing by chromatin structure and transcripti
182 d specific RNA-target sequences and modulate pre-mRNA splicing by sterically blocking the binding of
183 that can change a protein sequence, abnormal pre-mRNA splicing can be devastating for the encoded pro
184 strate that antisense-mediated modulation of pre-mRNA splicing can increase endogenous expression of
187 depletion caused a significant reduction in pre-mRNA splicing efficiency, as demonstrated through RN
188 tiviral vectors engineered to target several pre-mRNA splicing elements on the beta(IVS2-654)-globin
190 unclear how reduced expression of this core pre-mRNA splicing factor leads to craniofacial defects.
193 essential heterodimer of the U2AF1 and U2AF2 pre-mRNA splicing factors nucleates spliceosome assembly
195 dramatic translocation of Hnrnpa1 and other pre-mRNA splicing factors to the nucleus in a transcript
199 In the mammalian nervous system, alternative pre-mRNA splicing generates functionally distinct isofor
202 ts with the photoreceptor phyB and regulates pre-mRNA splicing in Arabidopsis (Arabidopsis thaliana).
205 ought to define the landscape of alternative pre-mRNA splicing in prostate cancers and the relationsh
206 n embryonic day 13-13.5 (E13-13.5) corrected pre-mRNA splicing in the juvenile Usher syndrome type 1c
207 rotein 13) regulates the budding pattern and pre-mRNA splicing in yeast cells; however, no Bud13p hom
210 1-3 identified a large number of genes whose pre-mRNA splicing is altered under dark and light condit
214 patterns through the regulation of specific pre-mRNA splicing is essential for adequate plant develo
217 hylation plays an essential role in accurate pre-mRNA splicing necessary for a range of developmental
220 also form a complex and coordinately control pre-mRNA splicing of a subset of genes involved in light
222 ABA-responsive AtU2AF65b functions in the pre-mRNA splicing of FLC and ABI5 in shoot apex, whereby
223 ring as well as the transcript abundance and pre-mRNA splicing of flowering-related genes in the knoc
224 ssing PRMT5 activity, palbociclib alters the pre-mRNA splicing of MDM4, a negative regulator of p53,
225 nisms regulating the LPS-induced alternative pre-mRNA splicing of the MyD88 transcript in murine macr
226 mbryos by causing non-productive alternative pre-mRNA splicing of xol-1, the master sex-determination
227 s employ antisense oligonucleotides to alter pre-mRNA splicing or diminish target gene expression and
228 ressed genes identified dysregulation of the pre-mRNA splicing pathway, accompanied by perturbed auto
229 teraction among U2 snRNPs and affects global pre-mRNA splicing pattern and extensive gene expression.
230 NF-kappaB likely regulates MyD88 alternative pre-mRNA splicing per se rather than regulating splicing
231 tanding of human retinal development and the pre-mRNA splicing process, and help to identify new cand
234 polysaccharide (LPS); thus, this alternative pre-mRNA splicing represents a negative feedback loop th
237 organ system in utero preemptively corrects pre-mRNA splicing to abrogate the disease phenotype.
238 Our results connect changes in alternative pre-mRNA splicing to oncogenic alterations common in pro
239 SF3B1 mutations are associated with aberrant pre-mRNA splicing using cryptic 3' splice sites (3'SSs),
240 etary restriction, we find defects in global pre-mRNA splicing with age that are reduced by dietary r
241 3b1-K700E mutation in mouse B cells disrupts pre-mRNA splicing, alters cell development, and induces
244 beyond transcription initiation and regulate pre-mRNA splicing, and thereby mRNA isoform production,
246 o SR proteins-SRSF3 and SRSF7, regulators of pre-mRNA splicing, nuclear export and translation-intera
247 transcription elongation, cotranscriptional pre-mRNA splicing, transcription termination, and conseq
248 Pat1 is a hub for mRNA metabolism, acting in pre-mRNA splicing, translation repression, and mRNA deca
263 ed NS proteins via its role in governing MVC pre-mRNA splicing.IMPORTANCE The Parvovirinae are small
269 f glioblastoma stem-like cells by modulating pre-mRNA stability and expression of the FOXM1 gene.
270 lymerase to the 3' terminus, thus leading to pre-mRNA stabilization, or decay depending on the occurr
271 cruitment of splicing factors and consequent pre-mRNA structural remodeling, leading up to assembly o
273 licing elements on the beta(IVS2-654)-globin pre-mRNA such as cryptic 3' splice site, aberrant 5' spl
274 lymerase II transcribes several kilobases of pre-mRNA, suggesting that metazoan splicing transpires d
277 ing activates a poison 5'-splice site in its pre-mRNA that leads to a frame shift and degradation by
278 ribed as part of a polygenic precursor mRNA (pre-mRNA) that is initiated within a several-kilobase-lo
280 We show that RBPs frequently bind their own pre-mRNAs, their exons respond prominently to NMD pathwa
281 ectly bind to two distinct sites of the SMN2 pre-mRNA, thereby stabilizing a yet unidentified ribonuc
282 lice site (3'SS) of precursor messenger RNA (pre-mRNA) through non-Watson-Crick pairing with the 5'SS
284 with both RNAPII and m(6)A-modified nascent pre-mRNA to modulate RNAPII occupancy and alternative sp
285 lymerase binds the cap structure of cellular pre-mRNA to promote its cleavage by the PA subunit.
286 nscription elongation rates, (ii) binding to pre-mRNA to recruit splicing factors, and/or (iii) block
288 predicts splice junctions from an arbitrary pre-mRNA transcript sequence, enabling precise predictio
290 ear RNA surveillance system is active on all pre-mRNA transcripts and modulated by nutrient availabil
294 In cells, PRC2 transfers from chromatin to pre-mRNA upon gene activation, and chromatin-associated
297 codons introduced by mis-splicing of PgABCA2 pre-mRNA were prevalent in field-selected larvae from In
298 is assembled via sequential interactions of pre-mRNA with five small nuclear RNAs and many proteins.
299 to the mis-splicing of a distinct subset of pre-mRNAs with a widespread effect on gene expression, i