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1 whole human blood infected with Pseudomonas putida .
2 the dynamics of Cd(II) uptake by Pseudomonas putida.
3 m was initially misidentified as Pseudomonas putida.
4 ajectories of the soil bacterium Pseudomonas putida.
5 of the three CheR paralogues of Pseudomonas putida.
6 n growth competition assays with Pseudomonas putida.
7 ke processes in the genome-scale model of P. putida.
8 different samples with respect to that of P. putida.
9 lar metabolism and c-di-GMP signalling in P. putida.
10 naphthalene catabolic pathway of Pseudomonas putida.
11 amphor-hydroxylating system from Pseudomonas putida.
12 e cancer therapeutic cloned from Pseudomonas putida.
13 st step of camphor catabolism by Pseudomonas putida.
14 a coli was the donor compared to Pseudomonas putida.
15 genase cytochrome P450(cam) from Pseudomonas putida.
16 protease IV-negative Pseudomonas species, P. putida.
17 ared with planktonic cultures of Pseudomonas putida.
18 mma-lyase (MET) gene cloned from Pseudomonas putida.
19 expressed following initial attachment of P. putida.
20 to those of the same enzyme from Pseudomonas putida.
21 polyvalence enhanced PEf1 propagation in P. putida.
22 rmation regulation by the Rsm proteins in P. putida.
23 rates we observe competitive exclusion of P. putida.
24 mented in the platform bacterium Pseudomonas putida.
25 located on the EPS molecules produced by P. putida.
26 omatic compounds are intimately linked in P. putida.
29 oline 2,4-dioxygenase (QDO) from Pseudomonas putida 33/1 are homologous cofactor-independent dioxygen
31 rable Hg(R) captured to the chromosome in P. putida A simple mathematical model suggests these differ
32 te lactonizing enzyme (MLE) from Pseudomonas putida, a member of a family that catalyzes the syn-cycl
34 ia coli, Pseudomonas aeruginosa, Pseudomonas putida, Agrobacterium tumefaciens, and Acinetobacter cal
35 tions, alkane monooxygenase from Pseudomonas putida (alkB) is able to catalyze the difficult terminal
37 cells detached from biofilm (over 70% for P. putida and approximately 40% for polysaccharide producin
38 oter with a consensus FNR-binding site in P. putida and E. coli strains expressing only one FNR prote
41 ndelate dehydrogenase (MDH) from Pseudomonas putida and of the substrate-reduced enzyme have been ana
44 ver the course of growth of both Pseudomonas putida and P. aeruginosa, and compared the wild-type str
46 the DnaB replicative helicase of Pseudomonas putida and Pseudomonas aeruginosa and initiates the form
48 e replicative helicase, DnaB, of Pseudomonas putida and Pseudomonas aeruginosa were isolated and used
49 with two sequenced pseudomonads, Pseudomonas putida and Pseudomonas aeruginosa, yet revealed 1,159 ge
50 ly biofilm formation, HSLs extracted from P. putida and pure C(12)-HSL were added to 6-h planktonic c
51 ary for effective sulfate assimilation by P. putida and that the effect of finR mutation on PDTC prod
52 interaction between a strain of Pseudomonas putida and the fungus Saccharomyces cerevisiae was ident
54 ncluding Pseudomonas aeruginosa, Pseudomonas putida and Yersinia pestis, and in the presence of a hel
56 Biofilms with protein-based (Pseudomonas putida) and polysaccharide based EPS (Pseudomonas aerugi
58 yields pyruvate, which supports growth of P. putida, and 3-sulfolactaldehyde (SLA), which is oxidized
59 ria, Pseudomonas fluorescens and Pseudomonas putida, and a mercury resistance (Hg(R)) plasmid, pQBR57
60 were added to 6-h planktonic cultures of P. putida, and cell extracts were analyzed by 2-D gel profi
61 such as Comamonas testosteroni, Pseudomonas putida, and Ochrobactrum anthropi were selectively enric
62 f genomic information for P. fluorescens, P. putida, and P. stutzeri suggests that the findings repor
64 re employed for EPS removal from Pseudomonas putida, and the measured sulfhydryl concentrations on ba
65 ologous to the TonB protein from Pseudomonas putida; and CjrC was homologous to a putative outer memb
67 ndelate metabolic pathway permit Pseudomonas putida ATCC 12633 to utilize either or both enantiomers
68 sp. 1A, Arthrobacter sp. JS443, Pseudomonas putida B2) in the pH range 6.1-8.6 with resting cells an
69 ia coli, Salmonella enterica and Pseudomonas putida, based on single nucleotide differences in their
70 (S)-Mandelate dehydrogenase from Pseudomonas putida belongs to a FMN-dependent enzyme family that oxi
71 persistence in the middle section of the P. putida biofilm compared to the P. aeruginosa biofilms.
72 r between bulk and biofilm surface in the P. putida biofilm compared to those of P. aeruginosa biofil
75 Here, exoproteomic analysis of Pseudomonas putida BIRD-1 (BIRD-1), Pseudomonas fluorescens SBW25 an
79 eased survival of desiccation not only by P. putida but also by Pseudomonas aeruginosa PAO1 and Pseud
80 he known stress tolerance traits known in P. putida but also recognizes the capacity of this bacteriu
82 oots with a biocontrol strain of Pseudomonas putida, but not with a siderophore-deficient mutant, ind
83 , the strain was either P. fluorescens or P. putida, but the system did not make the distinction and
84 s lower intraspecific conjugation rate in P. putida By contrast, in two-species communities, both mod
85 t-associated terrestrial microbe Pseudomonas putida by Manuel Espinosa-Urgel's group that is reported
86 (5)-3-ketosteroid isomerase from Pseudomonas putida catalyzes a C-H bond cleavage and formation throu
87 caffeine degradation pathway of Pseudomonas putida CBB5 utilizes an unprecedented glutathione-S-tran
92 e attract significantly higher numbers of P. putida cells than roots of the DIMBOA-deficient bx1 muta
94 The P450cam monooxygenase from Pseudomonas putida consists of three redox proteins: NADH-putidaredo
96 , Mycobacterium tuberculosis and Pseudomonas putida CRPs are considered in the context of the ecologi
98 seudomonas aeruginosa and six in Pseudomonas putida, different transporters were predicted to functio
100 performed a transposon screen of Pseudomonas putida DSM 3601 to identify genes necessary for PDTC pro
101 s, Sulfolobus acidocaldarius and Pseudomonas putida) enriched in (13) C, (15) N, (18) O, (2) H and/or
107 hydrocarbons such as toluene in Pseudomonas putida F1 (PpF1) occurs via lateral diffusion through Fa
110 /L nZVI induced a persistent phenotype of P. putida F1 as indicated by smaller colony morphology, a m
113 of Pput2725 from the biodegrader Pseudomonas putida F1, a COG4313 channel of unknown function, using
119 the iron-sulfur clusters in the different P. putida FNR proteins influence their reactivity with O2,
120 changes of the plant saprophyte Pseudomonas putida following 6 h of attachment to a silicone surface
123 ghtly motile, stationary-phase cells from P. putida G7 were mobilized effectively, but the actively m
125 chemotactic to naphthalene, and Pseudomonas putida G7 Y1, a nonchemotactic mutant strain, were simul
126 a Mycobacterium gilvum VM552 and Pseudomonas putida G7, acting as representative nonflagellated and f
131 by the biofilm-forming bacterium Pseudomonas putida GB-1 and the white-rot fungus Coprinellus sp. The
132 mediated by the obligate aerobe Pseudomonas putida GB-1, was tested in a column of quartz sand fed w
136 ingle inoculations with R. irregularis or P. putida had differential growth effects on both cultivars
138 thioninase (rMETase) cloned from Pseudomonas putida has been found previously to be an effective anti
139 0cam (CYP101) from the bacterium Pseudomonas putida has been investigated by high-resolution solution
140 catabolite repression control in Pseudomonas putida has been investigated using the bkd operon, encod
143 how that nano-Se particles synthesized by P. putida have a size range of 100 to 500 nm and that they
144 camphor hydroxylation pathway of Pseudomonas putida have been investigated as a function of oxidation
145 trast, Shewanella oneidensis and Pseudomonas putida have high iron but low intracellular manganese co
147 inosa helicase and significantly with the P. putida helicase, whereas deletion of amino acids 71-88 (
149 ons were Pseudomonas fluorescens-Pseudomonas putida (i.e., the strain was either P. fluorescens or P.
151 Transcriptome analysis of DIMBOA-exposed P. putida identified increased transcription of genes contr
152 recovers the mean-square displacement of P. putida if the two distinct swimming speeds are taken int
154 investigated the in vitro persistence of P. putida in heparinized saline: even under refrigerated co
155 ed crystal structures of MurU of Pseudomonas putida in native and ligand-bound states at high resolut
157 ep in the D-lysine catabolism of Pseudomonas putida in which 2OA is converted to D-2-hydroxyglutarate
158 ndelate dehydrogenase (MDH) from Pseudomonas putida is a flavin mononucleotide (FMN)-dependent enzyme
159 (S)-Mandelate dehydrogenase from Pseudomonas putida is a member of a FMN-dependent enzyme family that
160 Benzaldehyde lyase (BAL) from Pseudomonas putida is a thiamin diphosphate (ThDP)-dependent enzyme
162 ucleotides and fluorosugars in engineered P. putida is demonstrated with mineral fluoride both as onl
163 e 3,4-dioxygenase (3,4-PCD) from Pseudomonas putida is ligated axially by Tyr447 and His462 and equat
166 GGDEF/EAL response regulator in Pseudomonas putida, is transcriptionally regulated by RpoS, ANR and
167 " X-ray crystallography data for Pseudomonas putida ketosteroid isomerase (KSI), and we obtained conf
168 deposition of bacterial strains Pseudomonas putida KT2440 and Pseudomonas fluorescens LP6a at varyin
169 As resistance arsRBC operons of Pseudomonas putida KT2440 are followed by a downstream gene called a
171 we demonstrate that a strain of Pseudomonas putida KT2440 endowed with chromosomal expression of the
173 ous to sequences present in the completed P. putida KT2440 genome sequence or plasmid pWWO sequence t
174 hemotaxis receptor (McpS-LBR) of Pseudomonas putida KT2440 in complex with different chemoattractants
175 ealed that the default metabolic state of P. putida KT2440 is characterized by a slight catabolic ove
178 a proof of principle, induced cultures of P. putida KT2440 producing an EGFP-fused model protein by m
179 The annotated proline racemase ProR of P. putida KT2440 showed negligible activity with either ste
180 1 and (to a lesser extent) arsH2 genes of P. putida KT2440 strengthened its tolerance to both inorgan
181 chnologically relevant bacterium Pseudomonas putida KT2440 that greatly expands computable prediction
182 nd rhizosphere-dwelling organism Pseudomonas putida KT2440 to elaborate on the genomics and enzymolog
183 cs, fluxomics, and proteomics in Pseudomonas putida KT2440 to investigate the constitutive metabolic
184 ed ability of the soil bacterium Pseudomonas putida KT2440 to synthesize nanoparticles of elemental s
186 e sequence of the soil bacterium Pseudomonas putida KT2440 was published in 2002 (Nelson et al., ) th
187 n non plasmid-harboring cells of Pseudomonas putida KT2440 were spiked with different dilutions of th
190 he interaction between maize and Pseudomonas putida KT2440, a competitive coloniser of the maize rhiz
192 ringae pv. tomato strain DC3000, Pseudomonas putida KT2440, and Agrobacterium tumefaciens strain C58.
193 ous bacterial species, including Pseudomonas putida KT2440, Enterococcus faecalis ATCC 29212, Salmone
195 n the plant-beneficial bacterium Pseudomonas putida KT2440, identifying L-arginine as the main one ca
196 among environmental pseudomonads such as P. putida KT2440, P. fluorescens PfO1 and P. fluorescens WC
197 the three species investigated (Pseudomonas putida KT2440, Pseudomonas protegens Pf-5, and Pseudomon
198 ree aromatic-catabolic bacteria: Pseudomonas putida KT2440, Rhodoccocus jostii RHA1, and Amycolatopsi
199 viors of five bacterial species, Pseudomonas putida KT2440, Salmonella Typhimurium ATCC 14028, Staphy
200 aromatic-catabolizing organism, Pseudomonas putida KT2440, to demonstrate that these aromatic metabo
207 romiscuous alanine racemase from Pseudomonas putida (KT2440) was coupled with that of PAM to increase
208 ith more competing soil bacteria species, P. putida lysis was less critical in mitigating interspecie
209 by higher PEf1 propagation was offset by P. putida lysis, which decreased stress from interspecies c
210 zyme in the mandelate pathway of Pseudomonas putida, mandelamide hydrolase (MAH), catalyzes the hydro
212 a 2-keto acid decarboxylase from Pseudomonas putida (mdlC) and native E. coli aldehyde reductase (adh
213 dye-decolorizing peroxidase from Pseudomonas putida MET94 (PpDyP) and three variants generated by dir
215 -dioxygenase system (BZDOS) from Pseudomonas putida mt-2 catalyzes the NADH-dependent oxidation of be
219 h hypothetical polypeptides from Pseudomonas putida, Mycobacterium tuberculosis, Rickettsia prowazaki
220 alene and 2-methylnaphthalene by Pseudomonas putida NCIB 9816 and Pseudomonas fluorescens ATCC 17483
222 nano-Se and the metabolic versatility of P. putida offer the opportunity to use this model organism
223 ingle inoculations with R. irregularis or P. putida, only the cultivar with high mycorrhizal compatib
224 naB helicase of P. aeruginosa or Pseudomonas putida onto the RK2 origin in vitro and did not support
230 t willow clones and a grass with Pseudomonas putida PD1 was found to promote root and shoot growth an
232 The root-colonizing pseudomonad Pseudomonas putida (Pp) appears to produce two subunits, alpha and b
234 12 derivative introduced exogenously into P. putida PP3 via the suicide donor pAWT50 resulted in sile
235 enzoylformate decarboxylase from Pseudomonas putida (PpBFDC) is a thiamin diphosphate-dependent enzym
236 e Co-type nitrile hydratase from Pseudomonas putida (ppNHase) that may be important for catalysis.
238 endent monooxygenase system from Pseudomonas putida, putidaredoxin (Pdx) shuttles electrons between p
240 porter homologous to proteins in Pseudomonas putida responsible for the extrusion of organic solvents
241 The structure of a QuiC1 enzyme from P. putida reveals that the protein is a fusion of two disti
242 an efficient D-xylose utilizing Pseudomonas putida S12 strain was obtained by introducing the D-xylo
243 Pseudomonas protegens Pf-5, and Pseudomonas putida S12), siderophore secretion is higher during grow
245 val, the measured sulfhydryl sites within P. putida samples was 34.9 +/- 9.5 mumol/g, and no sulfhydr
247 (iv) allowed mapping of its network to 82 P. putida sequenced strains revealing functional core that
249 reen Fluorescent Protein (GFP)-expressing P. putida showed that DIMBOA-producing roots of wild-type m
250 distant hosts: Escherichia coli, Pseudomonas putida, Sphingobium japonicum, and Cupriavidus necator.
252 revealed the catabolic pathway for SQ in P. putida SQ1 through differential proteomics and transcrip
253 tidis, Enterobacter agglomerans, Pseudomonas putida, Staphylococcus aureus, and Bacillus subtilis was
255 to which alginate production by Pseudomonas putida strain mt-2 and by other fluorescent pseudomonads
259 lary assay and demonstrated that Pseudomonas putida strains F1 and PRS2000 were attracted to cytosine
261 e clusters were found in genomes of other P. putida strains, in other gamma-Proteobacteria, and in be
262 scentus, Pseudomonas aeruginosa, Pseudomonas putida, Streptomyces coelicolor, and chromosome I of Vib
263 oxin of the CYP101A1 system from Pseudomonas putida supports substrate oxidation by CYP199A2 at appro
264 Pseudomonas palleroniana TCA16, Pseudomonas putida TCA23 and N7, and Pseudomonas stutzeri TRA27a wer
265 i-Tn5-'phoA to identify genes in Pseudomonas putida that are matric water stress controlled and to ge
266 7120, Pseudomonas aeruginosa and Pseudomonas putida that bind multiple zinc ions with high stability
267 portion of PcaK, a permease from Pseudomonas putida that transports 4-hydroxybenzoate (4-HBA), were r
268 amphor monooxygenase system from Pseudomonas putida, the [2Fe-2S]-containing putidaredoxin (Pdx) shut
269 Although cytochrome P450cam from Pseudomonas putida, the archetype for all heme monooxygenases, has l
270 has been described in other bacteria, in P. putida these proteins seem not to be directly responsibl
271 L-arginine influence biofilm formation by P. putida through changes in c-di-GMP content and altered e
272 architecture that affords adaptability of P. putida to divergent carbon substrates and highlight regu
274 n the nonocular pathogenic host, Pseudomonas putida, to elucidate the molecular properties and virule
275 of two outer membrane proteins, Pseudomonas putida TodX and Ralstonia pickettii TbuX, which have bee
277 te-type [2Fe-2S] ferredoxin from Pseudomonas putida, transfers electrons from NADH-putidaredoxin redu
278 e results presented here demonstrate that P. putida undergoes a global change in gene expression foll
279 , plasmid concentration of 0.8 ng/microl, P. putida UWC1 cell concentration of 2.5 x 10(9) CFU (colon
280 transfer plasmid pBBR1MCS2 into Pseudomonas putida UWC1, Escherichia coli DH5alpha and Pseudomonas f
284 dr) and putidaredoxin (Pdx) from Pseudomonas putida was studied by molecular modeling, mutagenesis, a
285 s study, a genome-scale model of Pseudomonas putida was used to study the key issue of uncertainty ar
286 n donor to cytochrome P450cam in Pseudomonas putida, was improved by mutating non-ligating cysteine r
287 thologues from Pseudomonas aeruginosa and P. putida, we have determined that these operons encode enz
288 tat with cell retention (CCR) of Pseudomonas putida, we resolve this controversy and show that under
289 enetic tools and epistasis experiments in P. putida, we uncovered an 'upstream' cascade of three cons
290 (5)-3-ketosteroid isomerase from Pseudomonas putida were found to exhibit substantial variations in t
292 expression of an arsM-gfp fusion gene (GE P. putida), which was inserted into the bacterial chromosom
293 ruction and new computable phenotypes for P. putida, which can be leveraged as a first step toward un
295 of TtgABC, a key efflux pump in Pseudomonas putida, which is highly resistant to antibiotics, solven
296 overexpression of arsH1 and arsH2 endowed P. putida with a high tolerance to the oxidative stress cau
297 at was administered to the patients, grew P. putida with a pulsed-field gel electrophoresis (PFGE) pa
299 P101 (cytochrome P450(cam)) from Pseudomonas putida with the aim of generating novel systems for thei
300 putida producing protease IV, relative to P. putida with the vector alone, caused a threefold increas