ライフサイエンスコーパス: query

1 ence identity over a specified region of the query.

2 als harboring disease-associated variants as query.

3 alue of information that might result from a query.

4 ging with each increase in complexity of the query.

5 y Activities toxic/septic shock standardized query.

6 stem cells (LSC) and on leukemogenesis were queried.

7 n arrival and documented time of injury were queried.

8 om differentially private results of complex queries.

9 minor allele frequency (MAF) and chi-square queries.

10 ologies and development of many new template queries.

11 des API access that enables submitting batch queries.

12 ow deposited in the Ontobee for browsing and queries.

13 fy conditions that mimic or reverse gene set queries.

14 ualizations and down-stream analyses of bulk queries.

15 , then adapt and utilize the range trees for querying.

16 a scarcity of standardized tools to rapidly query 3D descriptors of the entire PDB.

17 It allows users to query a series of chemicals, drug combinations or multip

18 By periodically querying a large, representative sample of goods and ser

19 For each query, a hierarchically-clustered tissue distribution ma

20 The majority of queries about colonoscopy preceded the procedure, and co

21 Second, we respond to commentators' queries about the developmental process through which ch

22 as a way to efficiently index such data for queries about transcript presence.

23 uS is a web-based system that supports rapid query access to high-throughput microarray and NGS repos

24 ne data visualizations, which colleagues can query according to their own conditions to discover gene

25 To facilitate gene expression queries across different gene annotation versions, and t

26 Here, we queried actively dividing RP mutants through the cell cy

27 correct templates with the same Fold as the query, after excluding structures from the same SCOPe Su

28 utputs in an SQL database, allowing users to query all the results for the elements that will most im

29 sense mutations at this position designed to query alternative mechanisms.

30 species, and a suite of innovative tools for querying, analyzing and visualizing this data.

31 d annotated datasets that can be dynamically queried and analysed.

32 This content can be queried and visualized via multiple tools and also provi

33 a database suite of 412 curated multi-domain queries and 227,512 target sequences, representing at le

34 static figures inaccessible to computational queries and analyses.

35 rvices for both single protein or nucleotide queries and larger sets of protein query sequences.

36 The agreement between GT queries and pollen concentrations is usually poor except

37 ng the results of differentially private MAF queries and utilizing the dependency between tuples, an

38 than or equal to a given length L, between a query and a panel.

39 lease of a command-line interface to access, query and analyze data.

40 The efficiency of PBWT-Query and L-PBWT-Query is demonstrated using the simulat

41 Our database includes web-based query and online tools to assist in visualization and an

42 It improves the speed of query and retrieval by several magnitudes compared to th

43 alistic weight of confidence for each search query and sketch the felt areas and intensity distributi

44 en the evolutionary relationship between the query and template vanishes.

45 a of interest as quickly as possible through query and visualization tools.

46 d (RH) maps and offered only a few tools for querying and consolidating that data.

47 onal analysis modes that facilitate database querying and real-world data analysis.

48 t a highly efficient R-package seqminer2 for querying and retrieving sequence variants from biobank s

49 ecipient serum in 4 of 7 cases that could be queried, and immigration of lineages from recipient seru

50 yMDB provides different options for database query, and allows users to upload their microarray data

51 r with a choice of structures matching their query, annotated with residue conservation scores in a m

52 ds upon LAVA by improving the speed of k-mer querying as well as the accuracy of the genotyping strat

53 th 39% less space and can answer small-batch queries at least five times faster.

54 aces featuring programmatic use case example queries based on specific biological questions.

55 ed, recent progress in this field depends on query-based attention, which extends the ability of thes

56 e and artificial intelligence and exploiting query-based attention.

57 nited Network for Organ Sharing database was queried between May 2007 and March 2014.

58 Using database queries, bioinformatic analyses, as well as RIP and RNA

59 The package offers access to the flexible query builder and the library of term enrichment tools o

60 Thera-SAbDab can be queried by therapeutic name, by a combination of metadat

61 from the differentially private results of a query by exploiting the correlations between the genomes

62 ithm, L-PBWT-Query, we further speed up PBWT-Query by introducing additional data structures that all

63 We address this query by relating a 3-tiered multi-model mean (MMM) over

64 Queries can be easily fine-tuned to retrieve the desired

65 a graph-database format, and graph-database queries can be used to answer questions of interest that

66 ms), while differentially privacy chi-square queries can reveal up to 40% more sensitive information.

67 transfer the corresponding fragments to the query cavity space, thereby proposing a first step to fr

68 brain disease and suggest its potential for querying circuit function and delivering therapeutic gen

69 By querying clinical exome sequencing cases and through Gen

70 etreatment and signal amplification steps to query complex samples.

71 Queries composed of intersection, fuzzy intersection, di

72 Queries composed of intersection, fuzzy intersection, di

73 We use Internet query data and citizen science data to characterize publ

74 We collected combined search query data for the US and the UK from Google Trends, and

75 Query data from our hospital's Clinical Documentation Im

76 that end, in this paper, the role of Google query data in the predictability of COVID-19 in the Unit

77 ining (Australia) influenza and local search query data to predict influenza epidemics a different (n

78 uenza surveillance and local internet search query data, this study investigated whether seasonal inf

79 nd for enrichment test of different forms of query data.

80 e rise to synthetic lethal relationships, we queried dependencies in cancers with microsatellite inst

81 onze' criteria, allowing users to filter and query depending on their needs.

82 Here, we show that MLCs can query EHRs in a manner similar to the hypothetico-deduct

83 We queried electronic health records to identify patients m

84 Several type of queries enable users to explore the database by either t

85 We queried England's Hospital Episode Statistics database a

86 individuals with 95% confidence with only 5 queries, even when SNPs with MAF <0.05 are hidden.

87 d to list words in response to verbal probes querying five psoriasis treatments: self-injectable biol

88 nited Network for Organ Sharing database was queried for adult KALT recipients from 1988 to 2015 and

89 Nationwide Readmissions Database (2017) was queried for adult patients readmitted following an EGS p

90 The National Cancer Database was queried for adults undergoing 5 complex cancer surgeries

91 nited network for organ sharing registry was queried for all adults (age >=18) who underwent first-ti

92 cademic private practice were electronically queried for all cases of PPV for retinal detachment perf

93 The OPTN/UNOS database was queried for all first-time isolated adult liver transpla

94 The NHANES database was queried for all men aged 18-59 years during the years 20

95 t Nationwide Inpatient Sample (HCUP-NIS) was queried for all patients with cancer hospitalized with a

96 The Cancer Genome Atlas (TCGA) was queried for clinicopathologic data and syntaxin 6 expres

97 edicare and Medicaid Services databases were queried for data on NIH funding and industry partnership

98 nters for Medicare and Medicaid Services was queried for each of the 20 top codes top in general surg

99 Quality Improvement Program (ACS-NSQIP) was queried for elective DPs from 2014 to 2017.

100 Publication databases were queried for key terms included in articles up to Septemb

101 NIH RePORTER was queried for new grants (R01, -03, -21) awarded to Depart

102 The National Cancer Database was queried for pancreatic cancer patients who underwent pan

103 and Corporate Data Warehouse databases were queried for patients who underwent major vascular or gen

104 The 2004-2015 National Cancer Database was queried for patients who underwent upfront, complete res

105 ement Project database from 2005 to 2016 was queried for patients with a diagnosis of CD, UC, maligna

106 The National Cancer Database was queried for patients with appendiceal cancer undergoing

107 The National Cancer Database (NCDB) was queried for patients with GBM.

108 rauma Quality Improvement Program (2017) was queried for pediatric (age <=17 years) patients admitted

109 ascular procedures between 2013 and 2018 was queried for provider type (IR or ETS).

110 Planning and Research Cooperative System was queried for scheduled admissions in which a colectomy wa

111 , Epidemiology, and End Results database was queried for survival statistics.

112 Emory Eye Center databases were queried for the following International Classification o

113 The AHSQC registry was queried for VHR patients who underwent mesh excision.

114 The most commonly searched queries for each condition yield different types of info

115 led the emergence of virus-delivered genetic queries for functional genomics and virology (vectors 3.

116 Internet search queries for respiratory symptoms rose approximately one

117 OMIC database from 2008 to 2018 using search queries for terms associated with known complications of

118 and use the tool to reconstruct networks and query for interactors of the kinetochore complex as well

119 the COVID-19 pandemic, and a PubMed Central query for telemedicine in ophthalmology or teleophthalmo

120 ity, a majority of this data remains hard to query for the research community due to a lack of effici

121 ver, generally require significant effort in query formulation and optimization (especially in search

122 A statewide clinical data registry was queried from 2006 to 2016 and 60,791 patients undergoing

123 urgical Quality Improvement Program data was queried from 2012 to 2018 and merged with institutional

124 surgeries (MIGS) including the iStent, were queried from the database using Current Procedural Termi

125 ) for all indications between 2014 and 2017, queried from the nationwide prospective Dutch Pancreatic

126 2000, and July 1, 2019, were retrospectively queried from the picture archiving and communication sys

127 the large-scale analysis of real-time search queries from a dominant search engine in China.

128 We then identified queries from those same users for medical symptoms durin

129 n interactively explore associations between queried gene(s) and their regulators (cis-eQTLs, trans-e

130 classified the homology relationship of each query gene against each target genome into three main cl

131 Fagin determines the genomic context of each query gene in a focal species compared to homologous seq

132 vidence - a failure to detect a homolog of a query gene.

133 and negative correlations between a pair of queried genes.

134 ce based on JavaScript, allowing the user to query genes of interest and visualize the cluster struct

135 inferred over half the "Unknown" A. thaliana query genes, and about 20% for S. cerevisiae, as lacking

136 umscribed, any user can immediately identify query genomes as members and submit comments about the L

137 In a typical GES search (GESS), a query GES is searched against a database of GESs obtaine

138 We propose GPress, a framework for querying GFF files in a compressed form.

139 To support queries, GPress compresses the data in blocks and create

140 available by a high-availability cluster and queries have been tuned to ensure a real-time performanc

141 First, for a given query image sequence a scaling factor is estimated to ma

142 Of nine DMRs that could be queried in a reduced representation bisulfite sequencing

143 nction, so that they can be mapped onto user queries in support of hypothesis-driven biomolecular res

144 uring a 12-month period and identified those queries in which the timing of colonoscopy could be esti

145 e to MCS impact every gene ontology category queried, including GABAergic neurotransmission, the endo

146 tches sharing correlated signatures with the query indicate related cellular responses frequently gov

147 to identifying shared DNA segments between a query individual and a very large panel containing milli

148 A newly designed query interface enables global metadata search with auto

149 atabase is accompanied by an easy-to-use web query interface for meaningful downstream analysis.

150 At last, a new web query interface has been added to miRDB for prediction o

151 is and visualization tools and user-friendly query interfaces have been implemented in the database t

152 IList), to enumerate intersections between a query interval q and an interval set R.

153 The efficiency of PBWT-Query and L-PBWT-Query is demonstrated using the simulated data and the U

154 lue of information before the answer to that query is known, in situations where payoffs are unknown

155 In our approach, each query is regarded as a "crowd sensor" with a certain wei

156 tion layer and user interface to more easily query KGs and store, rank and explore query results.

157 data selection via query tools or Structured Query Language (SQL) preparation of summary documents, i

158 approaches have been introduced to index and query large collections of data sets.

159 and a significant speed up in its ability to query large datasets due to automated parallelization an

160 that RTFC is an efficient data structure for querying large-scale datasets regarding Allen's relation

161 sion and recovery of Cas9-edited barcodes to query lineage segregation.

162 We identified queries made to Bing originating from users in the Unite

163 to April 22, 2020 (email and newsletter) to query members of U.S. national critical care organizatio

164 and dialysis (3-5%) varied according to the query method used.

165 hods compare in detail the global shape of a query molecule against a large database of potential dru

166 he small number of structures containing the query motif and ignoring most of the structures that are

167 REPIC allows users to query N(6)-methyladenosine (m(6)A) modification sites by

168 ctiveness and health services researchers to query National Drug Codes (NDCs) that represent products

169 d (ii) substantial increase in the number of queries needed to confirm an individual's beacon members

170 eb interface has been updated to display and query new data.

171 MyDGR accepts query nucleotide sequences in FASTA format, and outputs

172 ty-Generating Retroelements (DGR) systems in query nucleotide sequences.

173 EINDEER also supports exact presence/absence queries of k-mers.

174 cy framework that limits the likelihood that queries of the synthetic participants' data could identi

175 The present manuscript represents the query of a nationalized database for VCA type, immunosup

176 ommunity with the resources for the unbiased query of cancer mechanisms.

177 stablishment of quality control measures and query of evidence.

178 An electronic query of patient records at Duke University Health Syste

179 Author-initiated PubMed Central query of small case series in glaucoma, pediatric neuro-

180 like the existing tools for the analyses and query of these resources, SEMA is explicitly designed to

181 hosphamide, doxorubicin, and paclitaxel were queried on their use of supplements at registration and

182 RNA-Seq experiments, supporting simultaneous queries on both the GFF and expression files.

183 Clients can perform queries on the API using different metadata information

184 The query options have been extended to include searches by

185 isting tools unsuitable for interactive data query or as part of genomic data visualization platforms

186 ii is an intracellular bacterium that causes query, or Q fever, a disease that typically manifests as

187 alytical tools, including a new viewer and a query page for the analysis of phased small RNAs; these

188 myocardial infarction in the United States, queried patients for hospitalization events during inter

189 Modeling query peptides in their associated TCR-pMHC crystal stru

190 which we can analyze and bound the space and query performance of HowDe-SBT compared to other SBT met

191 different types of information with cataract queries presenting more commonly with treatment informat

192 s, it permits extensive customization of the query process and reference databases to meet the user '

193 ilarity between identified sequences and the query protein more accurately, Phylo-PFP reranks retriev

194 to assign domain matches onto stretches of a query protein.

195 tructural matches for fully 45% of the 9,671 query proteins and confirming up to 98% of existing anno

196 s to be classified and/or a search string to query PubMed for articles.

197 CDC queried PulseNet, the national laboratory network for fo

198 ers for Disease Control and Prevention (CDC) queried PulseNet, the national laboratory network for fo

199 gate intracellular parasite and the cause of query (Q) fever.

200 e have developed an orthogonal approach that queries R-loops via the presence of long stretches of si

201 Program directors were queried regarding SEE provision, characteristics, and pe

202 chieve the best time complexity for interval queries regarding all Allen's relations among the three

203 y symptoms rose approximately one week after queries relating to colonoscopy, raising the possibility

204 ns in the KG and the storage and analysis of query results are straightforward; however, for complex

205 n inference attack on differentially private query results by utilizing the correlations between the

206 ubMed, filtering relevant articles from such query results can be a non-trivial and highly time consu

207 reference, (iv) allows exporting of mutation query results for custom analysis, (v) includes a biblio

208 unctionality and intuitive visualizations of query results has emerged.

209 easily query KGs and store, rank and explore query results.

210 er experience by adding new features such as query searches and a statistics page, and enabled direct

211 Results from example query searches highlight the utility of LDtrait in uncov

212 the user to view an alignment between their query sequence and a representative FunFam structure and

213 tersection of the results of the search on a query sequence can be obtained.

214 an predict the specific toxicity type of the query sequence.

215 benchmarks known to the authors include only query sequences with single protein domains.

216 ucleotide queries and larger sets of protein query sequences.

217 study of medals whose authenticity have been queried, showing some have unusually similar composition

218 minates the need for subjective selection of query signatures, added to eliciting better proxy for po

219 onal surveillance data with data from search queries, social media posts, and crowdsourcing.

220 he overlap of each orthologous group for the queried species.

221 We queried SPLIT registry for pediatric transplants between

222 Thus, the ability to efficiently query, store, rank and explore sub-graphs of a complex K

223 ver, due to the sheer size of variants being queried, such tasks can be computationally expensive wit

224 Using this approach, we query sufficiency in meiotic CO suppression, and identif

225 , UMD3.1.1, with cross-genome navigation and queries supported in JBrowse and BovineMine, respectivel

226 ming of adverse effects as reported by users querying symptoms on an internet search engine.

227 thon library that implements an in situ data query system for local or remotely hosted indexed genomi

228 We queried text comments from Reddit, a social media platfo

229 t Retract-and-Reorder measure (an electronic query that identifies orders placed for a patient, retra

230 We queried the 2010 to 2014 National Readmissions Database

231 We queried the National Inpatient Sample from 2012 to 2015

232 We queried the NHSN, NSQIP, and administrative data systems

233 We queried the NorthShore Meningioma Database for patients

234 A web-based survey that queried the number of patients that a hepatologist cares

235 We queried the United Network for Organ Sharing data sets f

236 We query the anti-apoptotic genes BCL2L1 and MCL1, and the

237 technologies are being increasingly used to query the antibody, or B-cell receptor (BCR), sequence r

238 Together, the tools enable researchers to query the complex genomic PCAWG data dynamically and int

239 d provides multiple visualization methods to query the data in a single web-based tool.

240 ommand-line interface and a web front-end to query the database.

241 e novo chromosome 17p11.2 rearrangements and query the molecular mechanisms underlying both recurrent

242 for the selected kinetic model, but to also query the possibility that alternative models agree with

243 the victim is in the dataset, by repeatedly querying the beacon for his/her single-nucleotide polymo

244 and (iv) a web service for programmatically querying the entire dataset.

245 ides a standardized and secure interface for querying the genomic datasets.

246 se genes were associated with survival after querying the KMplot database.

247 and relapse-related behaviors in male rats, querying the roles of DA neuron inhibitory and excitator

248 veys for collection of these data, and while querying the vast amounts of literature using keywords i

249 For simple queries, the inclusion of direct connections in the KG a

250 eployed a web server through which users can query their genes of interest, visualize the network, ga

251 s, we transform an interval query to a range query, then adapt and utilize the range trees for queryi

252 The ability to query these data for sequence search terms would facilit

253 ts are straightforward; however, for complex queries, these capabilities become exponentially more ch

254 Based on a semantic query, this tool will help users discover relevant model

255 We outline an approach that queries three information systems (living seed plants, l

256 ning potential homologs of a gene or protein query, thus enabling gene-specific genome studies over l

257 proposals are close in chemical space to the query, thus supporting lead optimization, while 3D-shape

258 f information to reduce the construction and query time as well as the size of the index.

259 The query time for AIList is O(log2N+n+m), where n is the nu

260 A long-term oceanographic dataset (EN4) was queried to characterize the temperature and salinity reg

261 the University of Minnesota (2015-2017) were queried to complete a follow-up Participant Report of Sy

262 nd February 2019, hospital billing data were queried to detect all inpatient hospitalizations at the

263 he pharmacovigilance database, VigiBase, was queried to determine whether drug inhibition of an ident

264 or undocumented, and many resources must be queried to find potentially significant phenotypic assoc

265 The Nationwide Inpatient Sample (NIS) was queried to identify all inpatient admissions with a diag

266 Registration was queried to identify all-cause mortality.

267 nited Network for Organ Sharing database was queried to identify deceased donor livers procured from

268 An institutional database was queried to identify incident patients and determine base

269 The medical record is queried to identify individuals with previously diagnose

270 The Nationwide Inpatient Sample database was queried to identify neonates hospitalized for endogenous

271 am (ACS-NSQIP) 2014 Participant Use File was queried to identify patients having undergone pancreatod

272 The National Inpatient Sample was queried to identify women age >=18 years in the United S

273 es the way for using real-time search engine queries to efficiently map earthquake felt area in the r

274 riting reproducible workflows with automated queries to RegulonDB.

275 aizeDIG), and enable flexible user-specified queries to the MaizeGDB database (MaizeMine).

276 interval relations, we transform an interval query to a range query, then adapt and utilize the range

277 A query to identify blood-related publications in the PubM

278 nd associated information data selection via query tools or Structured Query Language (SQL) preparati

279 identify the most relevant tissues for each query trait or sample, providing insights for future stu

280 We queried two European-American cohorts and one Turkish co

281 researchers more easily build and export API queries; understand the data abstractions and indices av

282 Archived datasets can be queried using full-text search (e.g. keywords, Boolean a

283 Queries using the alpha-core formula identified 93% of a

284 ded to enhance biological interpretations of queried variants.

285 quilibrium (LD) with a user-provided list of query variants.

286 2 implements a novel variant-based index for querying VCF/BCF files.

287 OMIM.org also supports computational queries via a robust API.

288 at explores the searching trends of specific queries via Google.

289 databases and search technologies (iSearch, Query View Reporting system, and IN-SPIRE [Pacific North

290 by issues of sample bias and skew in search query volumes, perhaps as a result of media coverage.

291 year GTs, an annual and clear seasonality of queries was found in all regions depending on the predic

292 An additional query was performed to identify all cases of endophthalm

293 In our second algorithm, L-PBWT-Query, we further speed up PBWT-Query by introducing add

294 DB, the first automated primer designing and query web service for small ncRNAs.

295 n relative search frequency (RSF) values for queries were 66.7 +/- 13.3, 58.6 +/- 6.2, 33.3 +/- 6.7,

296 ation-seeking behaviors in the search engine queries, which are submitted by tens of millions of user

297 gnatures 1000-connectivity mapping data sets queried with messenger RNA signature of RUNX1 knockdown

298 ce that seamlessly integrates large database queries with visualizations that enable users to quickly

299 DL4papers receives as input a query with the desired keywords, and it returns a ranked

300 NSQIP-eligible procedures were queried within 90 days following the RAI, and the associ