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1 athway were found to lie on a single 10.5-kb restriction fragment.
2 ith sample-specific linkers appended to each restriction fragment.
3 relies on the selective PCR amplification of restriction fragments.
4 ia at species and strain levels by resolving restriction fragments.
5 nt formation at meiosis by using single-dose restriction fragments.
6 termining the amplitude curve that describes restriction fragment amplitude as a function of mobility
7 used haplotype analysis, DNA sequencing, and restriction fragment analysis of mutations to evaluate t
8 in situ hybridization (FISH), flow-FISH, and restriction fragment analysis showed no change in telome
9 l copies was characterized from a chromosome restriction fragment and found to contain a sequence tha
11 te DNA substrates, including several natural restriction fragments and different PCR-generated fragme
13 mere length by Southern blot of the terminal restriction fragments and quantitative PCR (qPCR) of tel
14 to determine the relative positions of these restriction fragments and use them to serve as markers.
15 with one or two restriction enzymes and the restriction fragments are resolved by agarose gel electr
16 abeled with a different fluorescent dye, and restriction fragments are sized on a capillary DNA analy
18 ical model for the location and shape of the restriction fragments as a function of fragment size, wi
20 membered ring pairs Im/Py and Hp/Py on a DNA restriction fragment at four 6-base pair recognition sit
23 y of Chromosome III, affecting the size of a restriction fragment containing rDNA repeats and produci
24 od based on the partially circular nature of restriction fragments containing replication bubbles and
25 determined by computer-predicted lengths of restriction fragments containing the SNPs, and was furth
26 FM) has been used to image a 471-bp bent DNA restriction fragment derived from the M13 origin of repl
29 AR-beta2-mediated antitumor activity, we did restriction fragment differential display-PCR and cloned
30 a genetically related subgroup of bacteria, restriction fragment digest pattern (RDP) type III-3, su
33 (BAC) clones, sensitivity and specificity of restriction fragment identification exceeded 96% on rest
34 andLeader has been used to perform automated restriction fragment identification for more than 850,00
36 intermediates in 31 adjacent and overlapping restriction fragments in the spacer, ranging in size fro
40 cation protocol assays and telomere terminal restriction fragment length assays were performed on poo
41 lso find that in-nucleus ligation eliminates restriction fragment length bias found with in-solution
42 of the t-loops corresponded to the telomere restriction fragment length from the ALT cell lines as d
43 e to that of Towne-BAC, displayed an altered restriction fragment length pattern, and replicated with
44 ere, we describe inverse PCR-based amplified restriction fragment length polymorphism (iFLP), a new t
45 proach of spoligotyping with IS6110-targeted restriction fragment length polymorphism (IS6110-RFLP) a
46 ne M. tuberculosis strain using IS6110-based restriction fragment length polymorphism (IS6110-RFLP) a
47 lsed-field gel electrophoresis (PFGE), IS900 restriction fragment length polymorphism (IS900-RFLP), a
48 A novel method called "multiplex-terminal restriction fragment length polymorphism (M-TRFLP)" has
49 se chain reaction (qPCR), mutliplex-terminal restriction fragment length polymorphism (M-TRFLP), and
50 ree controls using polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) meth
52 gment by polymerase chain reaction and HinfI restriction fragment length polymorphism (PCR/RFLP).
53 and pfdhps genes were analyzed by LDR-FM and restriction fragment length polymorphism (RFLP) analyses
54 d voriconazole, and molecular relatedness by restriction fragment length polymorphism (RFLP) analysis
56 tilocus sequence typing (MLST) and performed restriction fragment length polymorphism (RFLP) analysis
57 ng high-performance liquid chromatography or restriction fragment length polymorphism (RFLP) analysis
58 air, plasmids were sequenced or subjected to restriction fragment length polymorphism (RFLP) analysis
60 In order to assess the -455G/A polymorphism, restriction fragment length polymorphism (RFLP) analysis
62 DNA dot blotting, IS1004 fingerprinting, and restriction fragment length polymorphism (RFLP) analysis
63 our nosocomial outbreaks were typed by Afut1 restriction fragment length polymorphism (RFLP) analysis
64 The isolates were genotyped by IS6110-based restriction fragment length polymorphism (RFLP) analysis
65 with culture-proven tuberculosis, combining restriction fragment length polymorphism (RFLP) analysis
66 pulsed-field gel electrophoresis (PFGE) and restriction fragment length polymorphism (RFLP) analysis
67 tuberculosis isolates were identified by PCR-restriction fragment length polymorphism (RFLP) analysis
69 peats in the acidic repeat protein gene, (2) restriction fragment length polymorphism (RFLP) analysis
70 for Pneumocystis jirovecii that is based on restriction fragment length polymorphism (RFLP) analysis
73 2007, 503 isolates were genotyped by IS6110 restriction fragment length polymorphism (RFLP) and spol
74 ts of the more commonly used methods, IS6110 restriction fragment length polymorphism (RFLP) and spol
75 eight eukaryotic species, and we describe a restriction fragment length polymorphism (RFLP) assay th
76 of the TNFB gene encoding TNF-beta and at a restriction fragment length polymorphism (RFLP) at posit
77 pressed sequence tag polymorphism (ESTP) and restriction fragment length polymorphism (RFLP) markers.
78 al evaluation of 479 samples was done with a restriction fragment length polymorphism (RFLP) method a
79 lts were also compared to an established PCR-restriction fragment length polymorphism (RFLP) method p
80 of 216 patients and all were genotyped using Restriction Fragment Length Polymorphism (RFLP) or seque
81 lates of a single serotype had a single wbiI restriction fragment length polymorphism (RFLP) pattern,
82 inks frequently demonstrate identical IS6110 restriction fragment length polymorphism (RFLP) patterns
84 We identified unique HaeIII and HpaII gag restriction fragment length polymorphism (RFLP) profiles
85 An evaluation of the utility of IS6110-based restriction fragment length polymorphism (RFLP) typing c
87 berculosis Hospital by spoligotyping, IS6110 restriction fragment length polymorphism (RFLP), and 24-
88 proportions to determine how pyrosequencing, restriction fragment length polymorphism (RFLP), and dir
89 al of 100 isolates were analysed with IS6110-restriction fragment length polymorphism (RFLP), spoligo
94 cer cases and 1,077 controls using PCR-based restriction fragment length polymorphism (RFLP-PCR) anal
96 l transcribed spacer (ITS) database terminal restriction fragment length polymorphism (T-RFLP) approa
98 isotope probing (SIP) combined with terminal restriction fragment length polymorphism (T-RFLP), high-
102 ndent techniques, quantitative PCR, terminal restriction fragment length polymorphism (TRFLP) and nex
103 ield experiment were profiled using terminal restriction fragment length polymorphism (TRFLP) and seq
104 e nucleotide polymorphism (SNP) (screened by restriction fragment length polymorphism [RFLP] analysis
105 hout a region of the genome, demonstrating a restriction fragment length polymorphism among an encaps
106 n alternative to conventional nested PCR and restriction fragment length polymorphism analyses for th
108 ymes were used for polymerase chain reaction-restriction fragment length polymorphism analysis (PCR-R
109 om 15 dogs and 27 cats were typed using URA5 restriction fragment length polymorphism analysis (RFLP)
110 subtyped with a small subunit rRNA-based PCR-restriction fragment length polymorphism analysis and a
111 e point, HCV genotype was determined by both restriction fragment length polymorphism analysis and ph
112 mmunity composition was assessed by terminal restriction fragment length polymorphism analysis and py
114 k of diarrhea in France were analyzed by PCR-restriction fragment length polymorphism analysis and se
116 mbrane protein A (ompA) gene sequencing, and restriction fragment length polymorphism analysis are cu
117 petitive units (MIRU-VNTR), and IS6110-based restriction fragment length polymorphism analysis cumula
118 morphism analysis, and sequencing as well as restriction fragment length polymorphism analysis for id
119 -based assays or a polymerase chain reaction-restriction fragment length polymorphism analysis in 160
120 were genotyped by polymerase chain reaction-restriction fragment length polymorphism analysis in 58
121 be homoplasmic by polymerase chain reaction/restriction fragment length polymorphism analysis in all
122 validated by polymerase chain reaction (PCR)-restriction fragment length polymorphism analysis of 60
124 s and performed DNA sequencing and PCR-based restriction fragment length polymorphism analysis of sev
125 s/genotype of isolates was determined by PCR restriction fragment length polymorphism analysis of the
126 p1a locus in the TIGR4 genetic background by restriction fragment length polymorphism analysis of the
127 It was confirmed to be genotype 1 by PCR-restriction fragment length polymorphism analysis of the
130 of Listeria monocytogenes by serotyping and restriction fragment length polymorphism analysis using
133 , chromosome painting, Southern blotting and restriction fragment length polymorphism analysis, subcl
146 Bacterial DNA was analyzed using terminal restriction fragment length polymorphism and 16S pyrotag
147 ere analyzed using polymerase chain reaction-restriction fragment length polymorphism and 5'-end [gam
148 multidrug-resistant tuberculosis cases using restriction fragment length polymorphism and by cross-ma
149 eumocystis control samples were genotyped by restriction fragment length polymorphism and multilocus
150 bovis strains had the same 16S ribosomal DNA restriction fragment length polymorphism and often had t
151 bs were analyzed and compared using terminal restriction fragment length polymorphism and sequence an
152 3, that had insertion sequence 6110 (IS6110) restriction fragment length polymorphism and spoligotype
154 sm in NQO1 using a polymerase chain reaction-restriction fragment length polymorphism assay and for t
155 r PCR, and/or a conventional PCR method (PCR-restriction fragment length polymorphism assay), were pe
156 ient isolate, there were two distinct IS1245 restriction fragment length polymorphism banding pattern
157 d 2008 from three humic lakes using terminal restriction fragment length polymorphism fingerprinting
158 throughput 18S rRNA tag sequencing, terminal restriction fragment length polymorphism fingerprinting,
159 were evaluated by polymerase chain reaction restriction fragment length polymorphism for polymorphis
161 ed groups based on distinct ribosomal spacer restriction fragment length polymorphism genotypes (RSTs
162 s genotype classification was done by IS6110 restriction fragment length polymorphism genotyping and
163 as to identify the three markers by PCR and restriction fragment length polymorphism in parallel, an
164 o population studies, were examined by using restriction fragment length polymorphism IS6110 fingerpr
165 ative in discriminating the four-band IS6110 restriction fragment length polymorphism isolates from e
166 this approach with direct sequencing and the restriction fragment length polymorphism method indicate
167 both parental alleles were demonstrated with restriction fragment length polymorphism of polymerase c
170 e and suitable for PCR checking, SNP typing (restriction fragment length polymorphism or amplificatio
171 techniques have been developed, based on PCR-restriction fragment length polymorphism or sequencing a
173 method for the 37% of isolates displaying a restriction fragment length polymorphism pattern with <6
175 of isolates of each subgroup share the same restriction fragment length polymorphism patterns of the
176 two Nocardia patient isolates showed unusual restriction fragment length polymorphism patterns with r
177 ipheral blood leukocytes and analyzed with a restriction fragment length polymorphism PCR method.
179 ion, employing the polymerase chain reaction-restriction fragment length polymorphism technique (PCR-
181 virulence factors, ribosomal RNA gene spacer restriction fragment length polymorphism types (RSTs), o
182 jor histocompatibility complex class II DRB3 restriction fragment length polymorphism types 8/23, 3/1
183 For the SNPs, we designed a low-cost PCR-restriction fragment length polymorphism typing method.
185 found that 4 of 46 heterozygotes analyzed by restriction fragment length polymorphism were actually G
186 of nirS-denitrifers (assessed using terminal restriction fragment length polymorphism) was interactiv
188 and identified, on the basis of biochemical, restriction fragment length polymorphism, and 16S rRNA g
189 -403, evaluated by polymerase chain reaction-restriction fragment length polymorphism, and CCR5Delta3
190 genes for toxins A, B and binary toxin using restriction fragment length polymorphism, and identifica
191 genotyped by polymerase chain reaction (PCR)-restriction fragment length polymorphism, and IL-1RN var
192 enotypically matched (by spoligotype, IS6110 restriction fragment length polymorphism, and mycobacter
193 nalytical methods, including pyrosequencing, restriction fragment length polymorphism, and sequencing
194 g of the -174 nucleotide variant was done by restriction fragment length polymorphism, heteroduplex a
195 ermined on thyroid FNAB specimens by PCR and restriction fragment length polymorphism, plus direct se
198 rRNA bacterial community analyses (terminal restriction fragment length polymorphism, T-RFLP) were p
199 ntional methods based on cDNA sequencing and restriction fragment length polymorphism, the microarray
200 and G/A(22018) polymorphisms, determined by restriction fragment length polymorphism, was used as th
201 y the presence of the A1 allele of the TaqIA restriction fragment length polymorphism, which is assoc
202 nt type was assigned by a combination of PCR-restriction fragment length polymorphism-based assays.
203 263 controls underwent CD14 genotyping using restriction fragment length polymorphism-polymerase chai
213 thamoeba isolates, mitochondrial DNA (mtDNA) restriction fragment length polymorphisms (RFLPs) and cy
214 f N. veterana gave identical and distinctive restriction fragment length polymorphisms (RFLPs) for an
215 -phosphate dehydrogenase or to determine the restriction fragment length polymorphisms of X chromosom
216 genotyped for BsmI, ApaI, TaqI, and FokI VDR restriction fragment length polymorphisms were used for
218 DNA damage-associated markers, mean telomere restriction fragment length, and genomic stability diffe
220 tion inferred from mitochondrial DNA (mtDNA) restriction-fragment length polymorphism (RFLP) data and
221 and diarrhea cases were compared by means of restriction-fragment length polymorphism (RFLP), rapid a
224 tuberculosis strains associated with IS6110 restriction fragment-length polymorphism (RFLP) pattern
227 morphisms by using polymerase chain reaction-restriction fragment-length polymorphism analysis in 134
228 cribed sequence (ITS) and mitochondrial cox1 Restriction fragment-length polymorphism analysis of ITS
229 On the basis of a polymerase chain reaction-restriction fragment-length polymorphism analysis of the
230 By use of a polymerase chain reaction-based restriction fragment-length polymorphism analysis techni
232 interaction between these variants using PCR/restriction fragment-length polymorphism assays in 454 s
234 representing 2 distinct ribosomal DNA spacer restriction fragment-length polymorphism genotypes (RSTs
236 omegalovirus isolates were analyzed, both by restriction fragment-length polymorphism typing and by s
243 olates underwent insertion sequence (IS)6110 restriction-fragment-length polymorphism analysis, targe
244 sed sequence tags (ESTs) accounting for 2266 restriction fragments (loci) on the homoeologous group 3
245 We used pulsed-field gel electrophoresis and restriction fragment mapping to analyze the structure of
246 We used pulsed-field gel electrophoresis, restriction fragment mapping, and fluorescence microscop
247 Variations in melting behavior, observed as restriction fragment melting polymorphisms (RFMPs), were
248 measurements of the mean length of terminal restriction fragments (mTRFs) and display age-dependent
249 ata lane analysis, a procedure for detecting restriction fragment multiplets while simultaneously det
250 e level of transcription, repair at the MspI restriction fragment of MET16 exhibits periodicity in li
251 is or a hybridization assay, in which a 3 Mb restriction fragment of the X chromosome is used as a ra
252 on (PCR) amplification and display of 3' end restriction fragments of double-stranded cDNAs was used.
253 o low-light tolerance by transformation with restriction fragments of genomic DNA of the pseudorevert
255 es between B DNA in BL21(DE3) and integrated restriction fragments of K-12 DNA inherited by REL606.
256 as measured by signal intensity of telomere restriction fragments on gels and fluorescence in situ h
257 ne of the markers is a polymorphic amplified restriction fragment (PARF) - a sequence found in both A
258 MLST housekeeping gene loci are detected by restriction fragment pattern analysis rather than sequen
261 s, and services to plan and analyze terminal restriction fragment polymorphism (T-RFLP) experiments.
262 ployed to characterize bacteria and terminal restriction fragment polymorphism was used to profile bo
263 t frequent VVC based on profiles of terminal restriction fragment polymorphisms of 16S rRNA genes and
265 tion fragment identification exceeded 96% on restriction fragments ranging in size from 600 base pair
266 on the PCR amplification is the size of the restriction fragment, requiring a quantile normalization
267 ally significant, long-range interactions at restriction fragment resolution, assigning long-range in
268 are tools for the automated detection of DNA restriction fragments resolved on agarose fingerprinting
270 with fundamental drawbacks, we used terminal restriction fragment (T-RF) length polymorphism profilin
271 The phylogenetic affiliation of terminal restriction fragments (T-RFs), together with correlation
272 mpared for a highly curved 199-basepair (bp) restriction fragment taken from the VP1 gene in Simian V
273 The electrophoretic mobility of a curved DNA restriction fragment taken from the VP1 gene in the SV40
276 irtually pure and comprehensive libraries of restriction fragments that contained replication initiat
277 and found that SC2SC2 plants contained extra restriction fragments that hybridized to PaSLF17 in addi
280 lain the observed parameters of the terminal restriction fragment (TRF) dynamics while two-subpopulat
281 e limitations, we took advantage of terminal restriction fragment (TRF) length polymorphisms (T-RFLP)
282 lomere length, as expressed by mean terminal restriction fragment (TRF) length, was measured in 419 r
283 M genomewide map for mean leukocyte terminal-restriction fragment (TRF) lengths measured by Southern
284 The correlation of T/S ratios with Terminal Restriction Fragment (TRF) lengths measured by Southern
285 qPCR, and correlated with those of telomere restriction fragments (TRF) and quantitative FISH measur
287 d sequencing of parental and novel telomeric restriction fragments (TRFs), along with MinION sequenci
289 MLRFT resolved the 103 isolates into 15 restriction fragment types, giving a discrimination inde
291 pulsed-field gel electrophoresis, multilocus restriction fragment typing, and multilocus sequence typ
293 urification often involves the separation of restriction fragments via electrophoresis, the cutting o
295 photo-cross-linked in situ, and the telomere restriction fragments were purified by gel filtration ch
296 ei was photo-cross-linked, and the telomeric restriction fragments were purified by gel filtration.
298 eport the sequencing of the remainder of the restriction fragment, which revealed three further open
299 not only the size but also the order of the restriction fragments, which adds another dimension to t
300 ry of gapped DNA molecules by treating a DNA restriction fragment with the hydroxyl radical, generate