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1 c efficiency for protein-conjugated poly(ADP-ribose).
2 a monomer or in polymeric chains as poly(ADP-ribose).
3 ase IV is dependent upon ATP not NAD+ or ADP-ribose.
4 of a single hydroxyl group from the terminal ribose.
5 l tool to investigate different forms of ADP-ribose.
6 acids, glycogen-bound glucose, and RNA-bound ribose.
7 y of NrtR is antagonized by the effector ADP-ribose.
9 f Tpt1 in a product-mimetic complex with ADP-ribose-1"-phosphate in the NAD(+) site and pAp in the RN
10 P1 in ligand-free and in complex with uracil/ribose-1-phosphate, 2'-deoxyuridine/phosphate and thymid
12 upling as building blocks suitably protected ribose 12 with l-(+)-3-O-trifluoromethylsulfonyl-6-O-p-m
14 ctories of the MD simulation indicate that a ribose 2'-hydroxyl group destabilizes the pai-pai stacki
18 of a crystal structure of MtbPYK with bound ribose 5-phosphate (R5P), combined with biochemical anal
20 e OPPP, ribulose-5-phosphate is converted to ribose-5-phosphate (R5P)-required for purine nucleotide
21 nd therefore activates the PPP for NADPH and ribose-5-phosphate, which consequently detoxifies intrac
24 ctroscopies led to the assignment of the two ribose adducts being the constitutional isomers of an S-
27 lated cation channel hTRPM2, is gated by ADP-ribose (ADPR) independently of the C-terminal NUDT9H dom
28 members covalently link either a single ADP-ribose (ADPR) or a chain of ADPR units to proteins using
29 al roles, as well as the activity of the ADP-ribose (ADPR) transferase enzymes (PARP family members)
32 ymatic synthesis of an active azido-modified ribose analog, 5-azidoribose (5-AR), as well as the synt
33 te (PS) backbone modifications and different ribose and base modifications to improve pharmacological
35 we synthesized a variety of C4'-methylated d-ribose and l-lyxose-configured uridine derivatives by a
37 s, we identified, and characterized in vivo, ribose and methanocarba nucleosides, including with A(1)
39 s of nucleotides-either via the synthesis of ribose and the canonical nucleobases and then joining th
40 of an S- and an O-adduct of bisulfite to the ribose, and these are the final products after heating.
41 distinct ligands, fructose (anti-FruR) or D-ribose (anti-RbsR); and were complemented by 14 addition
44 lso utilize NAD+ and, to a lesser extent ADP-ribose, as the source of the adenylate group and that NA
45 on of miRNAs at the 2'-hydroxyl group on the ribose at 3'-end (2'-O-methylation, 2'Ome) is critical f
47 , we show that an optimal site exists within ribose binding protein (RBP) that, when disrupted, resul
49 the highly specific recognition of ribose by ribose-binding protein (RBP) to develop a single-protein
51 und with all hydroxyl groups of the terminal ribose blocked as its 1"-beta- O-methyl-2",3"- O-isoprop
52 ability against protein-conjugated mono(ADP-ribose), but improved catalytic efficiency for protein-c
53 e utilize the highly specific recognition of ribose by ribose-binding protein (RBP) to develop a sing
54 lcium-mobilizing second messenger cyclic ADP-ribose (cADPR), CD157, a sister protein of CD38, has bee
57 r, we attempted to confirm that NAD+ and ADP-ribose can be used as co-factors by human DNA ligase IV.
60 er in ZBTB24 binds PARP1-associated poly(ADP-ribose) chains and mediates the PARP1-dependent recruitm
61 eover, through its association with poly(ADP-ribose) chains, ZBTB24 protects them from degradation by
62 dicate that ARH3 can act as an eraser of ADP-ribose chromatin scars at sites of PARP activity during
64 in CSB-deficient cells using ADPr-ChAP (ADP ribose-chromatin affinity purification), and the results
67 vage those forces act through control of the ribose conformation and are transmitted to the sulfur vi
68 of the cleaved S-C bond correlates with SAM ribose conformation but not with positioning and orienta
69 restricted glucose availability, restricted ribose/deoxyribose flow and NADPH production, an accumul
73 s or for generating C(5) precursors (such as ribose) during growth on other (non-C(5)) substrates, th
74 We measured eNAD and its metabolites eADP-ribose (eADPR), eAMP and e-adenosine (eADO) from tissues
75 hat (1) in tissues, eNAD is degraded to eADP-ribose, eAMP and e-adenosine (eADO) by CD38, ENPP1 and N
76 adenine ring (PKA) and position 2'-OH of the ribose (Epac) have been used to produce target-selective
78 and guanine base positions while leaving the ribose flexible, and a transition state stabilization th
79 med ELTA (enzymatic labeling of terminal ADP-ribose) for labeling free or protein-conjugated ADP-ribo
81 ns, 16 of which catalyze the transfer of ADP-ribose from NAD(+) to macromolecular targets (namely, pr
82 aomicron can also extract the monosaccharide ribose from nucleosides and characterize proteins necess
83 he ARH3 (ADPRHL2) hydrolase that removes ADP-ribose from proteins have been associated with neurodege
84 enzymatic synthesis of NAD(+) analogues with ribose functionalized by terminal alkyne and azido group
85 cells, supporting the dynamic regulation of ribose glycation as well as validating the probe as a ne
86 t, similar to methylglyoxal (MGO) glycation, ribose glycation specifically accumulates on histones.
87 emonstrate this probe's utilities to uncover ribose-glycation and deglycation events as well as track
90 y(ADP-ribose) polymerase (PARP) and poly(ADP-ribose) glycohydrolase (PARG) are key enzymes in BER tha
91 1 (PARP1) and PARylation removal by poly(ADP-ribose) glycohydrolase (PARG) critically regulate DNA da
94 -ribose transferases and removed by poly(ADP-ribose) glycohydrolase (PARG), which plays important rol
101 16 in complex with monomeric and dimeric ADP-ribose in identifying the active site for binding and pr
102 hment at 2'- or 3'-hydroxyls of the terminal ribose in oligoribonucleotides, we have performed an ext
103 SCA7 patients displayed increased poly(ADP-ribose) in cerebellar neurons, supporting poly(ADP-ribos
104 eading to elevated DNA breakage and poly(ADP-ribose) induction that cannot be rescued by catalytic or
106 When a base is lost from RNA, the remaining ribose is found as a closed-ring or an open-ring sugar w
107 in milk from OB women and included: mannose, ribose, lyxose, lyxitol (0.5 mo); mannose, ribitol, glyc
108 of the available rNMP sequencing techniques, Ribose-Map can increase the reproducibility of rNMP sequ
110 Through a series of analytical modules, Ribose-Map transforms raw sequencing data into summary d
116 PARP catalytic domains transfer the ADP-ribose moiety from NAD(+) to amino acid residues of targ
118 for labeling free or protein-conjugated ADP-ribose monomers and polymers at their 2'-OH termini usin
119 actor to transfer monomer or polymers of ADP-ribose nucleotide onto macromolecular targets such as pr
120 This study underscores the selection of ribose nucleotides as second messengers and finds its ro
121 ional design of modulators, but the terminal ribose of ADPR is known to be essential for activation.
124 his activity of TNT was not inhibited by ADP-ribose or nicotinamide, indicating low affinity of TNT f
126 e ZnF domain of SIRT1 interact with poly-ADP ribose (PAR) in response to DNA damage, and are responsi
127 and activate PARP1/2, which deposit poly-ADP-ribose (PAR) to recruit XRCC1-Ligase3 and other repair f
128 expressed alone, it associates with poly(ADP-ribose) (PAR) chains and is recruited to DNA damage site
129 ges including the complexity of the poly(ADP-ribose) (PAR) chains, low abundance of the modification
130 ugh its ability to bind the ends of poly(ADP-ribose) (PAR) chains, the function of the histone varian
131 mutated in human cancers, binds to poly(ADP-ribose) (PAR) immediately following DNA damage and media
135 lar RNAs (snoRNAs) as activators of poly(ADP-ribose) (PAR) synthesis, demonstrating that this snoRNA-
138 nal modification by the addition of poly(ADP-ribose) (PAR), which promotes protein recruitment and lo
140 d that NOCT recognizes the chemically unique ribose-phosphate backbone of the metabolite, placing the
141 his effect, presumably because they generate ribose-phosphate derivatives from products of an unlinke
142 on to low folAmix by rerouting the 2-Deoxy-D-ribose-phosphate metabolism from glycolysis towards synt
143 selectivity: Optimization of the lipophilic ribose pocket-targeting substituent was followed by the
144 tive, rotated binding mode upon changing the ribose-pocket binding moiety from a pyrrolidinyl to an a
147 AD5-depleted cells are sensitive to poly(ADP)ribose polymerase (PARP) inhibitors and that the process
152 alpha exhibited lower expression of poly-ADP-ribose polymerase 1 (PARP1) gene, leading to a higher in
155 Alcohol feeding induced apoptosis (poly ADP-ribose polymerase [PARP] and caspase-3 [CASP-3] cleavage
156 n-1-associated protein to attenuate poly ADP-ribose polymerase activation and mitochondrial DNA damag
161 e that concurrent administration of poly(ADP-ribose) polymerase (PARP) and WEE1 inhibitors is effecti
162 induction of autophagy, and robust poly(ADP-ribose) polymerase (PARP) cleavage indicative of DNA dam
165 with response to poly(adenosine diphosphate-ribose) polymerase (PARP) inhibition in patients with pr
167 the automated radiosynthesis of the poly(ADP-ribose) polymerase (PARP) inhibitor [(18)F]olaparib.
168 sed a radiolabled poly(adenosine diphosphate ribose) polymerase (PARP) inhibitor called (125)I-KX1 to
169 n cancer (EOC) to poly(adenosine diphosphate-ribose) polymerase (PARP) inhibitor in a CARM1-dependent
170 synergistic cytotoxicity with the poly (ADP-ribose) polymerase (PARP) inhibitor olaparib against TNB
172 M-mutant cells to topotecan or the poly-(ADP-ribose) polymerase (PARP) inhibitor olaparib reflects de
173 CA2, could help select patients for poly(ADP-ribose) polymerase (PARP) inhibitor or platinum chemothe
176 d GLS(high) cells vulnerable to the poly(ADP-ribose) polymerase (PARP) inhibitor, olaparib, and prolo
179 , besides direct cytotoxic effects, poly(ADP ribose) polymerase (PARP) inhibitors (PARPis) exhibit an
180 tations that confer sensitivity to poly (ADP-ribose) polymerase (PARP) inhibitors (PARPis), but the r
181 nding acquired tumour resistance to poly(ADP-ribose) polymerase (PARP) inhibitors and other therapeut
182 ted breast cancers are sensitive to poly(ADP-ribose) polymerase (PARP) inhibitors and platinum agents
188 h immune checkpoint inhibitors and poly (ADP-ribose) polymerase (PARP) inhibitors in a variety of sol
189 nd renders cells hypersensitive to poly (ADP-ribose) polymerase (PARP) inhibitors used to treat BRCA1
190 work, we found that combination of poly (ADP-ribose) polymerase (PARP) inhibitors with drugs that inh
191 evels show increased sensitivity to poly(ADP-ribose) polymerase (PARP) inhibitors, especially when co
192 n important structural motif of new poly(ADP-ribose) polymerase (PARP) inhibitors, playing a useful r
195 ent show a significant response to poly (ADP-ribose) polymerase (PARP) inhibitors; patients with ovar
201 nkyrase-1 (TNKS) is a member of the poly(ADP-ribose) polymerase (PARP) superfamily of proteins that p
202 isite sensitivity to inhibitors of poly (ADP-ribose) polymerase (PARP) that are being tested in clini
203 olecular targets available such as poly (ADP-ribose) polymerase (PARP), epidermal growth factor recep
204 nhibitor of poly(adenosine diphosphate [ADP]-ribose) polymerase (PARP), has been associated with sign
205 ir C termini: ZAPL (long) encodes a poly(ADP-ribose) polymerase (PARP)-like domain that is missing in
209 sociates with the DNA damage sensor poly(ADP-ribose) polymerase 1 (PARP-1) and that the association r
210 NEDD8 in regulating the activity of poly(ADP-ribose) polymerase 1 (PARP-1) in response to oxidative s
214 romote the rapid proteolysis of the poly(ADP-ribose) polymerase 1 (PARP-1), but the mechanism of reco
216 e central DNA damage sensor protein poly(ADP-ribose) polymerase 1 (PARP1) and activates caspase-3 to
218 e found that ZBTB24 associates with poly(ADP-ribose) polymerase 1 (PARP1) and stimulates its auto-pol
219 inhibitor of the DNA repair enzyme poly(ADP-ribose) polymerase 1 (PARP1) for the detection of cancer
221 to a variety of cellular stresses, poly(ADP-ribose) polymerase 1 (PARP1) has vital roles in orchestr
222 hermore, inhibition or silencing of poly(ADP-ribose) polymerase 1 (PARP1) inhibits PAR-mediated recru
223 we have found that a host protein, poly(ADP-ribose) polymerase 1 (PARP1), facilitates IFNAR degradat
224 ntain other factors, including PML, poly(ADP-ribose) polymerase 1 (PARP1), ligase IIIalpha, and origi
225 we report that a cellular protein, poly(ADP-ribose) polymerase 1 (PARP1), plays a critical role in m
226 nzyme that catalyses this reaction, poly(ADP-ribose) polymerase 1 (PARP1), were discovered more than
227 replication forks from stalling at poly(ADP-ribose) polymerase 1 (PARP1)-DNA complexes trapped by PA
228 reversibly inhibits the activity of poly(ADP-ribose) polymerase 1, an important anticancer target in
230 nsitizers such as poly(adenosine diphosphate ribose) polymerase and mammalian-target-of-rapamycin inh
231 es elevated CD38 NADase and reduced poly(ADP-ribose) polymerase and SIRT1 activities, respectively, a
232 uisitely sensitive to inhibition of poly(ADP-ribose) polymerase has ushered in a new era of research
238 , RITA, AF, and Onc-1 sensitized to poly(ADP-ribose) polymerase inhibitors both in vitro and ex vivo
240 e disease, bone stabilizing agents, poly(ADP-ribose) polymerase inhibitors for BRCA mutation carriers
241 ion of the treatment indication for poly(ADP-ribose) polymerase inhibitors to include patients with H
242 s 4 and 6, angiogenesis inhibitors, poly(ADP-ribose) polymerase inhibitors, as well as chemotherapy a
246 ld change (suppression) of cleaved poly (ADP-ribose) polymerase was greater with palbociclib plus let
247 s is a prominent mechanism of PARP (Poly(ADP-ribose) Polymerase) inhibitor (PARPi) resistance in BRCA
248 e was associated with activation of poly(ADP-ribose) polymerase, which led to consumption of NAD(+).
249 on of LuTate and the small molecule Poly(ADP-ribose) polymerase-1 (PARP) inhibitor, talazoparib led t
251 toxicity in a process dependent on poly (ADP-ribose) polymerase-1 (PARP-1); a NAD(+)-consuming enzyme
252 amage, neuroinflammation, increased poly(ADP-ribose) polymerase-1 (PARP1) activity, single-cell somat
262 cent inhibitor of poly[adenosine diphosphate-ribose]polymerase 1 (PARP1), which is a nuclear enzyme t
264 ccumulation of three test proteins, poly-ADP-ribose polymerases 1 and 2 (PARP1/2) and histone PARylat
265 irtuins and poly-adenosine diphosphate [ADP] ribose polymerases [PARPs]) consumes considerable amount
267 ) through mechanisms that depend on poly(ADP-ribose) polymerases (PARP) and the catalytic subunit of
268 rms DNA adducts, thereby activating poly(ADP-ribose) polymerases (PARPs) to initiate DNA repair.
269 slational modification catalyzed by poly(ADP-ribose) polymerases (PARPs) using NAD(+) as ADP-ribose d
271 en suggested to be a target of the poly (ADP-ribose) polymerases Tankyrase 1, and we have found that
278 nd modifications to the 2'-carbon of the UTP ribose ring further decreased rates of excision to an un
279 es Psi-monobisulfite adduction, heat-induced ribose ring opening, and Mg(2+)-assisted reorientation,
281 plane, placing a C5'-H antiperiplanar to the ribose-ring oxygen, which helps stabilize the radical ag
283 H3-mutated patient cells accumulate mono(ADP-ribose) scars on core histones that are a molecular memo
284 ng protein (RBP) to develop a single-protein ribose sensor detectable via a sensitive NMR technique k
286 fy numerous proteins with mono- and poly(ADP-ribose) signals that are important for the subsequent de
287 and F61S) have reduced activity for free ADP-ribose, similar processing ability against protein-conju
288 ptured in the act of 2'-O methylation of the ribose sugar of the first nucleotide of SARS-CoV-2 mRNA.
289 biological activities of RNAs by biasing the ribose sugar pucker equilibrium toward the C3'-endo conf
293 ranslational modification synthetized by ADP-ribose transferases and removed by poly(ADP-ribose) glyc
294 ose), three pentoses (xylose, arabinose, and ribose), two deoxyhexoses (fucose and rhamnose), and two
295 structurally complex polymer composed of ADP-ribose units that facilitates local chromatin relaxation
298 Such detection is remarkably specific for ribose, with the minimal background signal from endogeno
300 t a compact pseudoknot, dock via an extended ribose zipper and jointly create a binding groove specif