ライフサイエンスコーパス: ribosomal DNA

1 g pyrosequencing of the V4 region of the 18S ribosomal DNA.

2 small RNA called qiRNA that originates from ribosomal DNA.

3 g of variable regions 7-9 of prokaryotic 16S ribosomal DNA.

4 ilin modulates the association of Pol I with ribosomal DNA.

5 e profile of hybrids, enhancing formation at ribosomal DNA.

6 g transcriptional silencing at telomeres and ribosomal DNA.

7 ctors of translation, RNA polymerase III and ribosomal DNA.

8 cription at telomeres, mating-type loci, and ribosomal DNA.

9 accharide binding protein, and microbial 16s ribosomal DNA.

10 gulator complex recruitment to telomeres and ribosomal DNA.

11 ed the enrichment of H3K4me3 and H3K36me3 on ribosomal DNA.

12 n these populations by DNA sequencing of the ribosomal DNA 18S-ITS-5.8S, 28S D2/D3 and a mitochondria

13 size, chromosome number, and organization of ribosomal DNA (45S and 5SrDNA) of A. digitata.

14 y elevated H3.3 occupancy, including the 45S ribosomal DNA (45S rDNA) loci, where loss of ATRX result

15 rom four nuclear gene fragments (18S and 28S ribosomal DNA, abdominal-A and RNA polymerase II) and re

16 ion of the fecal microbiota, analyzed by 16S ribosomal DNA amplicon sequencing.

17 Bacterial V4 16S ribosomal DNA amplicons were sequenced using Illumina Mi

18 lation forms a key element in the control of ribosomal DNA amplification as overexpression of PNC1 su

19 ble, but a number of organisms display rapid ribosomal DNA amplification at specific times or under s

20 rget of rapamycin (TOR) signaling stimulates ribosomal DNA amplification in budding yeast, linking ex

21 We show that ribosomal DNA amplification is regulated by three histon

22 overexpression of PNC1 substantially reduces ribosomal DNA amplification rate.

23 biome using molecular techniques such as 16S ribosomal DNA analysis may lead to interventions that sh

24 By 16S ribosomal DNA analysis, all six permafrost isolates were

25 nscribed spacer (ITS) regions of the nuclear ribosomal DNA and a fragment of the beta-tubulin (Tub) g

26 lus, c-Myc has been shown to be recruited to ribosomal DNA and activate RNA polymerase (pol) I-mediat

27 erminal domain binds G-quadruplex regions at ribosomal DNA and at gene promoters, including the well

28 omplex that is required for transcription of ribosomal DNA and for processing of 18 S rRNA.

29 nscribed spacer (ITS) regions of the nuclear ribosomal DNA and fragments of the translation elongatio

30 ifferentiating neutrophils also repositioned ribosomal DNA and mininucleoli to the lamina-a process t

31 t mitochondrial (matR) and nuclear loci (18S ribosomal DNA and PHYC) place Rafflesiaceae in Malpighia

32 Seminested PCR targeting Mucorales 18S ribosomal DNA and sequencing were performed on formalin-

33 d on the differential capacity to transcribe ribosomal DNA and synthesize proteins.

34 ocation indicators (endotoxin, bacterial 16S ribosomal DNA) and host response indicators (soluble clu

35 ing a telomeric-related repetitive sequence, ribosomal DNA, and a number of unclassified repetitive s

36 XCL10, lipopolysaccharide, soluble CD14, 16S ribosomal DNA, and interferon-alpha2 were associated wit

37 In vivo, Mot1 is associated with the ribosomal DNA, and loss of Mot1 results in decreased rRN

38 We further show that Chd1 directly binds to ribosomal DNA, and that both Chd1(-/-) epiblast cells in

39 strong clustering of centromeres, telomeres, ribosomal DNA, and virulence genes, resulting in a compl

40 In budding yeast, telomeres, the ribosomal DNA array, and HM loci are transcriptionally s

41 n fork barriers in the spacer regions of the ribosomal DNA array.

42 pindle pole body or changing the position of ribosomal DNA arrays resulted in the association of Pol

43 and Saw1 also contribute to the integrity of ribosomal DNA arrays.

44 tes with RNAPI and enforces the stability of ribosomal DNA arrays.

45 ncreased endothelial levels of bacterial 16s ribosomal DNA as well as increased subendothelial accumu

46 Transcription of ribosomal DNA by RNA polymerase I is a central feature o

47 studies have shown that transcription of the ribosomal DNA by RNA polymerase I is a major target for

48 to simply be a function of extrachromosomal ribosomal DNA circle production.

49 Rtg2p also suppresses ribosomal DNA circle production.

50 Accumulation of extrachromosomal ribosomal DNA circles (ERCs) appears to be an important

51 in the cellular content of extrachromosomal ribosomal DNA circles (ERCs), which can cause the demise

52 cluding protein aggregates, extrachromosomal ribosomal DNA circles, and abnormal nucleolar material -

53 leads to the production of extrachromosomal ribosomal DNA circles, which cause yeast demise.

54 10% missing, 10-25% unmapped, and 45S and 5S ribosomal DNA clusters as well as centromeres/satellite

55 in which the dynamic association of UBF with ribosomal DNA clusters recruits the pol I transcription

56 ication of the ITS2 subregion of the nuclear ribosomal DNA, commonly used for genotyping within this

57 act in concert to mediate rapid, directional ribosomal DNA copy number change.

58 ibosome synthesis capacity of cells with low ribosomal DNA copy number, and we find that these cells

59 t, linking external nutrient availability to ribosomal DNA copy number.

60 Ribosomal DNA data, sequence information from nematode-p

61 cts, many of which necessarily encompass the ribosomal DNA, detailed information on the prevalence an

62 elease prevents heterochromatin formation at ribosomal DNA during quiescence maintenance.

63 ves of silencing loss in the heterochromatic ribosomal DNA during the early phases of aging, followed

64 om across North and South America and used a ribosomal DNA-fingerprinting method to compare bacterial

65 Ribosomal DNA frameworks with sequence data from more th

66 the internal transcribed spacer 2 region of ribosomal DNA from Aspergillus flavus, Aspergillus fumig

67 we have extracted, amplified, and sequenced ribosomal DNA from S. cerevisiae.

68 of essentially full-length PCR-amplified 16S ribosomal DNA from the bronchial aspirates of intubated

69 nt results were resolved by D2 large-subunit ribosomal DNA fungal sequencing.

70 t natural replication-impeding loci like the ribosomal DNA gene cluster.

71 The use of other loci (16S and 18S ribosomal DNA gene regions) also added the detection of

72 e were assessed by using high-throughput 16S ribosomal DNA gene sequencing.

73 Here, we show that treacle is involved in ribosomal DNA gene transcription by interacting with ups

74 reported a function for mammalian treacle in ribosomal DNA gene transcription by its interaction with

75 anscribed spacer and D1/D2 region of the 28S ribosomal DNA gene.

76 actor (UBF) and affects transcription of the ribosomal DNA gene.

77 , the E2 protein interacts with the repeated ribosomal DNA genes found in this location and colocaliz

78 Ribosomal DNA genes in many eukaryotes contain insertion

79 pe 8 (HPV8) E2 protein binds to the repeated ribosomal DNA genes that are found on the short arm of h

80 es, which are present at a high frequency in ribosomal DNA genes, and potently and rapidly represses

81 se subunit I) and 18S (nuclear small subunit ribosomal DNA) genes to compare community composition be

82 disruption of the SIN domain lead to loss of ribosomal DNA heterochromatic gene silencing (Lrs(-) phe

83 o examine the V3-V5 regions of bacterial 16S ribosomal DNA in 40 samples of lung from 5 patients with

84 mutants exhibit similar phenotypes involving ribosomal DNA, including (i) loss of transcriptional sil

85 Silencing of ribosomal DNA increased with replicative age in either t

86 lated from seawater, followed by analysis of ribosomal DNA, indicated that the cells represented thre

87 -length polymorphism analysis of the 16S-23S ribosomal DNA intergenic spacer, clinical isolates of Bo

88 pture probes designed in the D1/D2 region of ribosomal DNA, internal transcribed spacer regions, and

89 the factors that influence transcription of ribosomal DNA is lacking.

90 cassettes, and synXII, specifically when the ribosomal DNA is moved to another chromosome.

91 nscribed spacer (ITS) as one part of nuclear ribosomal DNA is one of the most extensively sequenced m

92 Nuclear ribosomal DNA is particularly complex with respect to th

93 ernal transcribed spacer (ITS) region of the ribosomal DNA is the conventional marker region for fung

94 nal transcribed spacer (ITS2) of the nuclear ribosomal DNA] is highly suitable for all.

95 Anopheles species assignments based on ribosomal DNA ITS2 and mitochondrial DNA COI were compar

96 Independent of age, CD4(+) T-cell count, 16S ribosomal DNA load, and regulatory T-cell count, positiv

97 ite present in the nontranscribed spacers of ribosomal DNA, located in chromosome III.

98 Several epigenetic phenomena occur at ribosomal DNA loci in eukaryotic cells, including the si

99 s of host mitotic chromosomes, including the ribosomal DNA loci.

100 ited, along with upstream-binding factor, to ribosomal DNA loci.

101 anscription and genetic recombination at the ribosomal DNA locus (rDNA) have provided insight into th

102 of COMPASS are required for silencing at the ribosomal DNA locus (rDNA), a telomere, and the silent m

103 that occurs preferentially in the repetitive ribosomal DNA locus (rDNA).

104 ect on transcriptional silencing both at the ribosomal DNA locus and at telomeres, suggesting that po

105 stalled at replication fork barriers of the ribosomal DNA locus compared with wild-type cells.

106 Subdomains of the multicopy ribosomal DNA locus containing transcription units of RN

107 calizes with Topo IIalpha on UFBs and at the ribosomal DNA locus, and the timely resolution of both s

108 DNA repeats, found at the ribosomal DNA locus, telomeres and subtelomeric regions,

109 rids (R-loops) that prime replication in the ribosomal DNA locus.

110 rporation and increased transcription at the ribosomal DNA locus.

111 A polymerase I-directed transcription of the ribosomal DNA locus.

112 at the 5' end, and originate mostly from the ribosomal DNA locus.

113 silencing of Pol II-transcribed genes in the ribosomal DNA locus.

114 nding protein 1 (EBP1) and guide EBP1 to the ribosomal DNA locus.

115 telomere and mating type loci but not at the ribosomal DNA locus.

116 plasmic chloroplast (cp) genomes and nuclear ribosomal DNA (nR) are the primary sequences used to und

117 oup I intron at position S943 of the nuclear ribosomal DNA of the lichen-forming fungus Pleopsidium.

118 The ribosomal DNA origin binding protein Tif1p regulates the

119 to LINE; retrotransposon insertion sites in ribosomal DNA (p<0.01).

120 rotein that recruits RNA polymerase I to the ribosomal DNA promoter.

121 ne tested, but not at the RNAP I-transcribed ribosomal DNA promoter.

122 t of the nucleolar remodeling complex to the ribosomal DNA promoter.

123 silent VSG ES and immediately downstream of ribosomal DNA promoters and is abundant in the nucleolus

124 n3 activates Pol I, fostering recruitment to ribosomal DNA promoters.

125 bacteria and fungi, measured by 16S and 18S ribosomal DNA quantity.

126 Prior to anaphase of budding yeast, the ribosomal DNA (RDN) condenses to a thin loop that is dis

127 In yeast, circular ribosomal DNA (rDNA) accumulates dramatically as cells a

128 y, using a metagenomic approach based on 16S ribosomal DNA (rDNA) amplification, we demonstrated that

129 soriasis were analyzed using broad-range 18S ribosomal DNA (rDNA) and 5.8S rDNA/internal transcribed

130 g factor 1 (UBF1) on the promoter regions of ribosomal DNA (rDNA) and activates rDNA transcription, t

131 say targeted to a species-specific region of ribosomal DNA (rDNA) and an established fluorescent in s

132 akazakii strains were investigated using 16S ribosomal DNA (rDNA) and hsp60 sequencing.

133 Spt6 is essential for Pol I occupancy of the ribosomal DNA (rDNA) and rRNA synthesis.

134 components displayed disorganized nucleoli, ribosomal DNA (rDNA) and satellite DNAs.

135 activation of Hog1 is linked to a defect in ribosomal DNA (rDNA) and telomere segregation, and it ul

136 show that in budding yeast separation of the ribosomal DNA (rDNA) and telomeres also requires Cdc14,

137 nces genomic regions that include telomeres, ribosomal DNA (rDNA) and the cryptic mating-type loci.

138 Effort was focussed on 35S and 5S nuclear ribosomal DNA (rDNA) and the HRS60 satellite family of t

139 target of rapamycin, causes condensation of ribosomal DNA (rDNA) array and nucleolar contraction in

140 The multicopy ribosomal DNA (rDNA) array gives origin to the nucleolus

141 n budding yeast, the unique structure of the ribosomal DNA (rDNA) array is thought to cause late SCI

142 In the repetitive ribosomal DNA (rDNA) array of the budding yeast Saccharo

143 The repetitive ribosomal DNA (rDNA) array, however, undergoes little or

144 Tandemly repeated ribosomal DNA (rDNA) arrays are among the most evolution

145 When two ribosomal DNA (rDNA) arrays are present, one native and

146 n the number and the chromosomal location of ribosomal DNA (rDNA) arrays within populations of the al

147 ucleolar organizer regions (NORs) comprising ribosomal DNA (rDNA) arrays.

148 perresolution microscopy to demonstrate that ribosomal DNA (rDNA) can form linkages between chromosom

149 Expansion segments in ribosomal DNA (rDNA) can show length variation at the le

150 liana, 45S rRNA genes are found in two large ribosomal DNA (rDNA) clusters and little is known about

151 Ribosomal DNA (rDNA) consists of highly repeated sequenc

152 This study was undertaken to determine if ribosomal DNA (rDNA) copy number was constant or variabl

153 proliferative gills was used to amplify 16S ribosomal DNA (rDNA) for molecular phylogenetic analyses

154 d support a specific function for H3K56ac in ribosomal DNA (rDNA) gene transcription and nascent rRNA

155 d that CSA and CSB regulate transcription of ribosomal DNA (rDNA) genes and ribosome biogenesis.

156 Ribosomal RNA (rRNA) is transcribed from the ribosomal DNA (rDNA) genes by RNA polymerase I (Pol I).

157 Ribosomal DNA (rDNA) genes in eukaryotes are organized i

158 h quiescence, residual replication stress on ribosomal DNA (rDNA) genes leads to the formation of nuc

159 arriers within nontranscribed regions of the ribosomal DNA (rDNA) genes of many eukaryotes to coordin

160 ork barriers or Ter sites located within the ribosomal DNA (rDNA) intergenic spacer regions during un

161 etrotransposons, and noncoding RNAs from the ribosomal DNA (rDNA) intergenic spacers, consistent with

162 We analyzed plastid and nuclear ribosomal DNA (rDNA) internal transcribed spacer (ITS) s

163 Mitotic disjunction of the repetitive ribosomal DNA (rDNA) involves specialized segregation me

164 The ribosomal DNA (rDNA) is a specialized genomic region not

165 Cohesin binding to the ribosomal DNA (rDNA) is evolutionarily conserved from ba

166 Despite its importance, ribosomal DNA (rDNA) is not included in current genome a

167 The ribosomal DNA (rDNA) is the most evolutionarily conserve

168 Eukaryotic nuclear ribosomal DNA (rDNA) is typically arranged as a series o

169 vegetative cell nuclei, genetically unlinked ribosomal DNA (rDNA) loci are uniquely clustered togethe

170 ese genes, R2 elements have persisted in the ribosomal DNA (rDNA) loci of insects for hundreds of mil

171 lated nucleolar protein that associates with ribosomal DNA (rDNA) loci, where it interacts with the R

172 d heterochromatin protein 1alpha at multiple ribosomal DNA (rDNA) loci.

173 o promote silencing of genes at telomeric or ribosomal DNA (rDNA) loci.

174 d that 10 chromosomes (two per genome) carry ribosomal DNA (rDNA) loci.

175 ntain transcriptional output from eukaryotic ribosomal DNA (rDNA) loci.

176 ound that increased DNA damage occurs at the ribosomal DNA (rDNA) locus in PHF6-deficient cells.

177 evisiae occurs at the HM loci, telomeres and ribosomal DNA (rDNA) locus.

178 the replication of the tandem repeats of the ribosomal DNA (rDNA) locus.

179 zes sequences in the Tetrahymena thermophila ribosomal DNA (rDNA) minichromosome that are required fo

180 Resequencing Project (SGRP) within which the ribosomal DNA (rDNA) of 36 strains of S.cerevisiae were

181 In the ribosomal DNA (rDNA) of Saccharomyces cerevisiae, RNA po

182 ranscribed genes at telomeres and within the ribosomal DNA (rDNA) of the nucleolus.

183 , which confers specificity to the amplified ribosomal DNA (rDNA) origin by base pairing with an esse

184 array composed of 10,462 small subunit (SSU) ribosomal DNA (rDNA) probes (7167 unique sequences) sele

185 binds to a specific upstream element in the ribosomal DNA (rDNA) promoter and interacts with two oth

186 how further that Tor1 is associated with 35S ribosomal DNA (rDNA) promoter chromatin in a rapamycin-

187 enhance nucleolar occupancy of FGFR2 at the ribosomal DNA (rDNA) promoter.

188 -catenin, but only IRS-1 is recruited to the ribosomal DNA (rDNA) promoter.

189 DNA was analyzed both quantitatively by 16S ribosomal DNA (rDNA) quantitative polymerase chain react

190 We discovered a link to ribosomal DNA (rDNA) recombination when we found an inte

191 e PCR assay on the BD Max platform targeting ribosomal DNA (rDNA) region nucleotide sequences to quic

192 occurs between the intergenic spacer of the ribosomal DNA (rDNA) repeats and the intergenic sequence

193 lex maintains the integrity and silencing of ribosomal DNA (rDNA) repeats in the nucleolus.

194 uction of DNA double-strand breaks (DSBs) in ribosomal DNA (rDNA) repeats is associated with ATM-depe

195 se to anaphase transition, resolution of the ribosomal DNA (rDNA) repeats is delayed.

196 The presence of ribosomal DNA (rDNA) repeats on the right arm of chromos

197 Silencing within the yeast ribosomal DNA (rDNA) repeats protects the integrity of t

198 matic over tandem repeat families, including ribosomal DNA (rDNA) repeats, but rDNA methylation was s

199 The Tetrahymena thermophila ribosomal DNA (rDNA) replicon contains dispersed cis-act

200 al of approximately 12 million diatom V9-18S ribosomal DNA (rDNA) ribotypes, derived from 293 size-fr

201 iae, that stability of the highly repetitive ribosomal DNA (rDNA) sequences requires a Sir2-containin

202 In this assay, multicopy small-subunit (SSU) ribosomal DNA (rDNA) sequences were used as targets.

203 are usually classified on the basis of their ribosomal DNA (rDNA) sequences.

204 without cultivation by characterizing their ribosomal DNA (rDNA) sequences.

205 16S ribosomal DNA (rDNA) sequencing results revealed three n

206 Using small subunit (SSU) ribosomal DNA (rDNA) sequencing, we developed a targeted

207 ulture and internal transcribed spacer (ITS) ribosomal DNA (rDNA) sequencing.

208 -dependent histone deacetylase Sir2 controls ribosomal DNA (rDNA) silencing by inhibiting recombinati

209 lar mechanisms for SUMO-dependent control of ribosomal DNA (rDNA) silencing through the opposing acti

210 Deep sequencing of ribosomal DNA (rDNA) suggests thousands of different mic

211 Chromosome XII carries the ribosomal DNA (rDNA) that defines the nucleolus, a major

212 ignaling by starvation or rapamycin inhibits ribosomal DNA (rDNA) transcription and causes condensin-

213 plify nucleolar targeting of FGFR2, activate ribosomal DNA (rDNA) transcription and delay differentia

214 nd TCOF1, a nucleolar protein that regulates ribosomal DNA (rDNA) transcription and is mutated in Tre

215 he nucleolus is important for the control of ribosomal DNA (rDNA) transcription and ribosome biogenes

216 complex that functions in the activation of ribosomal DNA (rDNA) transcription by RNA polymerase I (

217 rithms predict that diseases with defects in ribosomal DNA (rDNA) transcription have mitochondrial dy

218 d transcription factor that is essential for ribosomal DNA (rDNA) transcription.

219 at the candidate oncoprotein, LYAR, enhances ribosomal DNA (rDNA) transcription.

220 s of the MET3pr-GFP expression inserted into ribosomal DNA (rDNA) using time-lapse microscopy.

221 cation pausing at tRNA genes, telomeres, and ribosomal DNA (rDNA) was not as great as in rrm3Delta ce

222 SWI/SNF physically associated with ribosomal DNA (rDNA) within the coding region, with an a

223 for quantification of EBV types 1 and 2; 16S ribosomal DNA (rDNA), a marker of microbial translocatio

224 r eukaryotic genomic elements, including the ribosomal DNA (rDNA), are composed of repeated sequences

225 nt of the large subunit (LSU) of the nuclear ribosomal DNA (rDNA), as well as fragments of the transl

226 During replication of nuclear ribosomal DNA (rDNA), clashes with the transcription app

227 replication defects at multiple sites within ribosomal DNA (rDNA), including at the replication fork

228 etitive sequences, including centromere, 45S ribosomal DNA (rDNA), knob, and telomere repeats.

229 The transcription of ribosomal DNA (rDNA), the processing of nascent rRNA mol

230 n of loci connected with the function of the ribosomal DNA (rDNA), which itself has high QFP.

231 process their substrates in both 601- and 5S ribosomal DNA (rDNA)-based nucleosomes.

232 By the use of 16S ribosomal DNA (rDNA)-based sequencing, we identified a l

233 ed and organized around actively transcribed ribosomal DNA (rDNA).

234 mutants also display increased silencing in ribosomal DNA (rDNA).

235 the efficient segregation of the repetitive ribosomal DNA (rDNA).

236 en growth restriction and DNA methylation at ribosomal DNA (rDNA).

237 Here, nonnative rRNA gene [ribosomal DNA (rDNA)] copies were identified in a set of

238 Here, we developed a mitochondrial 12S ribosomal DNA reference database for 67 fish species, re

239 ng from imperfect concerted evolution of the ribosomal DNA region follows a U-shaped allele frequency

240 internal transcribed spacer (ITS) and D1/D2 ribosomal DNA regions in an effort to obtain a species i

241 telomere position effect (TPE), silencing of ribosomal DNA, regulation of genes involved in nutrient

242 t replacing a boundary element (IR-R) with a ribosomal DNA repeat (rDNA-R).

243 red for replication fork progression through ribosomal DNA repeats and subtelomeric and telomeric DNA

244 ustering into foci at the nuclear periphery, ribosomal DNA repeats localizing within a single nucleol

245 Spontaneous Brc1 foci colocalize with ribosomal DNA repeats, a region prone to fork pausing an

246 luding a major preference for integration in ribosomal DNA repeats, and 13 other hotspots that contai

247 r the integrity of the nucleolus, containing ribosomal DNA repeats, the nucleoporins are required for

248 ic endonuclease Slx1 to ensure completion of ribosomal DNA replication.

249 16S rDNA gene was evaluated by the amplified ribosomal DNA restriction analysis (ARDRA) recruiting th

250 simulate multitemplate amplification of 16S ribosomal DNA sample and subsequent detection of these a

251 range of clinical sources were evaluated by ribosomal DNA sequence analysis, multilocus sequence ana

252 Ribosomal DNA sequence data abounds from numerous studie

253 rk of Theaceae based on plastome and nuclear ribosomal DNA sequence data, the temporal history of the

254 Phylogenetic analysis of the 16S ribosomal DNA sequence indicated that this isolate was a

255 quencing Project, we identify a rich seam of ribosomal DNA sequence variation, characterising 1,068 a

256 We analyzed 18S ribosomal DNA sequences across the intermediate plankton

257 ions were generated between 13.7 million 16S ribosomal DNA sequences and 8 immune mediators.

258 Molecular phylogenetic analysis based on 18S ribosomal DNA sequences consistently has placed this spe

259 16S ribosomal DNA sequences in 20 "H. heilmannii"-infected c

260 2062 polymerase chain reaction-amplified 16S ribosomal DNA sequences obtained from the fecal DNAs of

261 Unweighted Unifrac distances of 16S rDNA (ribosomal DNA) sequences confirmed the introduction of t

262 Integrated 16S ribosomal DNA sequencing and liquid chromatography coupl

263 roperties, ultrastructural features, and 16S ribosomal DNA sequencing classified this organism as a n

264 sceptible to all antibiotics tested, and 16S ribosomal DNA sequencing of available isolates to confir

265 munity production, with high-throughput 18 S ribosomal DNA sequencing to elucidate the relationship b

266 Culture, 16S ribosomal DNA sequencing, and histochemistry were used t

267 nal microbial diversity as determined by 16S ribosomal DNA sequencing.

268 y, the fecal microbiome were analyzed by 16S ribosomal DNA sequencing.

269 d microbiota composition was analyzed by 16S ribosomal DNA sequencing.

270 locations on the nucleosome: (1) the loss of ribosomal DNA silencing (LRS) surface in the nucleosome

271 H4 residues in the nucleosomal LRS (loss of ribosomal DNA-silencing) domain, we identified 24 mutati

272 Using short-subunit ribosomal DNA (SSU rDNA) sequences as key evidence, with

273 ynthesis, ribonucleotide levels, and affects ribosomal DNA stability, leading to the formation of a n

274 ssion of meiotic recombination, and maintain ribosomal DNA stability.

275 ogenetic analyses of protein markers and 18S ribosomal DNA support the reclassification of E. oleoabu

276 cruzi kinetoplast DNA (TckDNA), T. cruzi 18S ribosomal DNA (Tc18SrDNA), and murine mitochondrial DNA

277 mes, and key functional elements such as the ribosomal DNA tend to be formed of high copy repeated se

278 mic architecture, within the highly repeated ribosomal DNA that comprises the nucleolus of budding ye

279 required for efficient fork movement in the ribosomal DNA, the mating type locus, tRNA, 5S ribosomal

280 ortion of the nuclear large subunit (LSU) of ribosomal DNA, the RNA polymerase II second-largest subu

281 og that promotes the stability of repetitive ribosomal DNA, the same mechanism by which Sir2 extends

282 components differ in their requirements for ribosomal DNA; the two actively assembling components fa

283 KDM4A and consequently its association with ribosomal DNA through the SGK1 downstream kinase.

284 eferentially binds the transcribed region of ribosomal DNA to repress the transcription of ribosomal

285 ies also provide an in vivo model simulating ribosomal DNA transactivation outside the nucleolus, all

286 tochondrial dysfunction caused by defects in ribosomal DNA transcription and activation of the DNA da

287 ort interfering RNA results in inhibition of ribosomal DNA transcription and cell growth.

288 bolism, potentially linking and coordinating ribosomal DNA transcription and pre-rRNA processing to a

289 We discover that the majority of ribosomal DNA transcription and protein synthesis in CRC

290 l of cytidine deaminase-deficient cells, and ribosomal DNA transcription and stability.

291 Increased ribosomal DNA transcription has been proposed to limit m

292 sion, this work supports a role for impaired ribosomal DNA transcription in Cockayne syndrome and sug

293 Indeed, inhibition of ribosomal DNA transcription leads to mitochondrial dysfu

294 ication is exclusively enriched over the 35S ribosomal DNA transcriptional unit.

295 Luciferase and ribosomal DNA trees both indicate that the Lingulodinium

296 the assembly of eNoSC and protecting active ribosomal DNA units from heterochromatin formation.

297 The variable V6-V8 region of bacterial 16S ribosomal DNA was amplified, and PCR amplicons separated

298 , Epstein-Barr virus (EBV) and bacterial 16S ribosomal DNA were detected.

299 omponents fail to assemble in the absence of ribosomal DNA, whereas the thermodynamically driven comp

300 Sequencing of the D1-D2 region of the 28S ribosomal DNA yielded Apophysomyces trapeziformis in all