ライフサイエンスコーパス: scallop

1 ent subcommissures between posterior leaflet scallops.

2 Here we investigate the complex eye of scallops.

3 , we conclude that seismic exposure can harm scallops.

4 ting in 90-99% reduction in biomass of adult scallops.

5 nsitive to the precise temporal structure of scallops.

6 nsitive to the precise temporal structure of scallops.

7 in vitro, thereby preventing its binding to Scalloped.

8 oped switches the DNA-binding selectivity of Scalloped.

9 (Irbp18, Xrp1, Slow border, and Vrille) and Scalloped.

10 ories: thin-scalloped, thick-flat, and thick-scalloped.

11 Additionally, we developed Scallop, a novel computational method for the quantifica

12 Scallop achieves higher sensitivity and precision than p

13 izzard regulatory light chain (RLC) bound to scallop adductor muscle myofibrils in key physiological

14 two alpha-helical strands of a model of the scallop alpha-helical coiled coil.

15 We introduce Scallop, an accurate reference-based transcript assemble

16 he motor and the lever is similar in rabbit, scallop and chicken S1.

17 ependent on (a) conjunctive presentations of scallop and light, (b) number of conditioning trials, an

18 ombined action of the general wing activator Scalloped and a putative locally provided factor, the ac

19 The synergistic activities of the Yorkie/Scalloped and dJun/dFos transcriptional activators subse

20 hereas 30 (31.3%) and four (8.2%) with thick-scalloped and thin-scalloped biotypes, respectively, had

21 rthermore, combinations of binding sites for SCALLOPED and transcriptional effectors of signaling pat

22 The proteins Scalloped and Vestigial are known from genetic studies t

23 studies highlight the importance of correct scalloped and vestigial expression levels to normal wing

24 The scalloped and vestigial genes are both required for the

25 xity and, consistent with this, we show that Scalloped and Vestigial suppress terminal dendritic bran

26 t sensory neurons by selective expression of Scalloped and Vestigial.

27 ctor Cut, and the transcriptional regulators Scalloped and Vestigial.

28 Scalloped and Yorkie, transcriptional effectors of the H

29 patterns, including nodulation, banding and scallops and fingers.

30 Applied to scallops and related clades, we find that accumulating k

31 with partial detection in molluscs: mussels, scallops and snails but none in oyster, octopus and squi

32 Nautilus, through to concave mirror eyes in scallops and the large camera-type eyes of the more deri

33 d pre-stroke conformations of Dictyostelium, scallop, and chicken myosin II as well as Dictyostelium

34 of scalloped function, ectopic expression of scalloped, and ectopic expression of vestigial on the de

35 e nAChR/microsphere-based assay for mussels, scallops, and clams.

36 ies of scalloped mutant clones, implies that scalloped- and vestigial-dependent cell adhesion contrib

37 leaflet coaptation by drawing the individual scallops apart.

38 Endoscopic findings included scalloping appearance, mucosal cracking, and redness of

39 ences involving Mulroy Bay in Ireland, where scallops are commercially cultured.

40 Our results suggest that clams and scallops are unlikely to acclimate to ocean acidificatio

41 cument that the mirror-based eyes of the bay scallop Argopecten irradians and the sea scallop Placope

42 The bay scallop, Argopecten irradians, represents a commercially

43 ations that cause loss of wing tissue (e.g., scalloped, Beadex, cut, and apterous-Xasta), Lyra wing d

44 had mitral valve repair involving >1 leaflet scallop between October 2001 and July 2010.

45 These findings expand the roles for Yorkie/Scalloped beyond growth to encompass specific cell-fate

46 Vestigial protein that are not required for Scalloped binding in solution are required for the forma

47 nd four (8.2%) with thick-scalloped and thin-scalloped biotypes, respectively, had APE.

48 The effect of Pi on the E2 form of the scallop Ca-ATPase was also investigated, when it was fou

49 binding site for substrate on the E1 form of scallop Ca-ATPase was occupied by Pi, AMP-PNP, AMP-PCP,

50 mentation patterns of the E1 and E2 forms of scallop Ca-ATPase were examined.

51 In cells, Nwk-induced scallops can be extended by cytoskeletal forces to produ

52 main, corresponding to one type found in sea scallop catch ("smooth") muscle.

53 This reconstituted LCD is of a sea scallop catch muscle myosin with its phosphorylatable re

54 kely to act as an on-switch in regulation of scallop catch muscle myosin.

55 external surface microornament of the glass scallops Catillopecten natalyae and malyutinae is made b

56 various transcriptomes, and proteomes of the scallop Chlamys farreri, a semi-sessile bivalve with wel

57 The hyperpolarizing receptor potential of scallop ciliary photoreceptors is attributable to light-

58 nsistent, daily pile driving did not disrupt scallop circadian rhythm, but suggests serious impacts a

59 formation of the heterotetrameric Vestigial-Scalloped complex on DNA.

60 the inappropriate formation of the Vestigial-Scalloped complex, which forces the eye to transform int

61 Here the SCALLOP Consortium conducted a genome-wide association m

62 The SCALLOP consortium, for instance, contains data from ove

63 The eyes of scallops contain two separate retinas and our ray-tracin

64 0.6 mm laterally away from the posteromedial scallop, corresponding to anterior displacement of the m

65 ired with durable results when simple single-scallop disease is addressed.

66 perpolarizing, ciliary photoreceptors of the scallop does not use IP3-mediated Ca release, and the li

67 dentifies the Mediator complex, E2F1-Dp, and Scalloped/dTEAD as key regulators of TR transcription.

68 anipulated the temporal structure of natural scallops during behavioral playback and in vivo electrop

69 yses of the marine bivalve clade Pectinidae (scallops) during a major Plio-Pleistocene extinction in

70 onstrate that phenotypic expressivity of the scalloped(E3) (sd(E3)) mutation of Drosophila melanogast

71 Coins with scalloped edges or holes should be endoscopically remove

72 gy due to Gaussian curvature associated with scalloped edges, demonstrating that colloidal membranes

73 me unstable, instead forming structures with scalloped edges, where two adjacent lobes with opposite

74 riments to probe the temporal sensitivity of scallop encoding and recognition.

75 cortical thickening (33 patients), cortical scalloping/erosion (37 patients), and/or perpendicular p

76 , (b) number of conditioning trials, and (c) scallop extract concentration.

77 In general, the scallop extract potentiated phototactic suppression.

78 ctic behavior by compound pairings of light, scallop extract, and rotation were assessed.

79 The sole crystallin of the scallop eye lens was found to be homologous to Omega-cry

80 Within the scallop eye, immunofluorescence tests indicated that Ome

81 Cells overexpressing scalloped fail to proliferate in both notal and wing-bla

82 lones of cells mutant for a strong allele of scalloped fail to proliferate within the wing pouch, but

83 le image reconstruction of Ca(2+)-regulated (scallop) filaments reveals a helical array of myosin hea

84 ed from single neurons discriminated natural scallops from time-reversed, randomized, and jittered se

85 nalyzed the consequences of complete loss of scalloped function, ectopic expression of scalloped, and

86 the tiger shark (Galeocerdo cuvier) and the scalloped hammerhead (Sphyrna lewini), that remotely doc

87 s, including the endangered and CITES listed Scalloped Hammerhead (Sphyrna lewini).

88 rsions into deep, cold water by the tropical scalloped hammerhead shark (Sphryna lewini).

89 sted silky shark (Carcharhinus falciformis), scalloped hammerhead shark (Sphyrna lewini), smooth hamm

90 Adult scalloped hammerhead sharks dive rapidly and repeatedly

91 For scalloped hammerhead sharks Sphyrna lewini, a 1C rise in

92 Certain sharks (tiger shark, scalloped hammerhead) displayed prolonged periods of res

93 Scallop heavy meromyosin (HMM) preparation obtained by a

94 Further, Yorkie or Scalloped hyperactivation induced ectopic crystal cells

95 Genetic manipulation of yorkie and scalloped in the lymph gland specifically alters Serrate

96 nting time-reversed, randomized, or jittered scallops increased behavioral response thresholds, demon

97 simulated contaminated samples of mussel and scallop indicated recoveries in the range of 86 to 108%.

98 Bioprosthetic or native aortic scallop intentional laceration to prevent iatrogenic cor

99 The bioprosthetic or native aortic scallop intentional laceration to prevent iatrogenic cor

100 t laceration (Bioprosthetic or Native Aortic Scallop Intentional Laceration to Prevent Iatrogenic Cor

101 In Drosophila, the TEF-1 homolog Scalloped interacts with the cofactor Vestigial to drive

102 usly, but at temperatures near 0 degrees C a scalloped interface morphology appeared with convex and

103 The Drosophila TEAD ortholog Scalloped is required for Yki-mediated overgrowth but is

104 Scallop larvae exposed to playbacks of seismic pulses sh

105 noise sources to affect recruitment of wild scallop larvae in natural stocks.

106 evation (44%), hyporeflective vessels (40%), scalloped layers (22%), and retinal spaces (11%).

107 Omega-crystallin of the scallop lens is an inactive aldehyde dehydrogenase (1A9)

108 induced repeated valve closures in different scallop life stages, with particularly stronger effects

109 cating that long-read transcript assembly by Scallop-LR can reveal a more complete human transcriptom

110 We demonstrate Scallop-LR identifies more known transcripts and potenti

111 cific optimizations to Scallop, we developed Scallop-LR, a reference-based long-read transcript assem

112 The primary geometric mechanism underlying scallop malcoaptation in acute ischemic mitral regurgita

113 picomplexa) and provisionally named BSM (Bay Scallop Marosporida).

114 Interactions between scalloped, mastermind and Chip mutations indicate that m

115 Mutations in scalloped, mastermind, and a previously unknown gene, Ch

116 immunoassays performed well with mussel and scallop matrixes displaying adequate dynamic ranges and

117 Cells with a greater Scallop membership score are transcriptionally more stab

118 hows that the increase in the edge energy of scalloped membranes is compensated by concomitant decrea

119 embranes attached to chromatin with a unique scalloped morphology, but these nuclei neither accumulat

120 In all patients, mucosal changes of scalloping, mucosal mosaicism and reduced folds were see

121 Fully functional scallop muscle fibers were prepared such that each myosi

122 abeled regulatory light chains in functional scallop muscle fibers.

123 y of spin-labeled regulatory light chains in scallop muscle fibers.

124 the light chain domain of myosin in relaxed scallop muscle fibers.

125 Digestion of scallop muscle membrane fractions with trypsin led to re

126 ist within the Ca(2+) regulatory domain of a scallop muscle Na(+)-Ca(2+) exchanger that mediates dire

127 paramagnetic resonance (EPR) of spin-labeled scallop muscle, in conjunction with laser flash photolys

128 is of these clones, together with studies of scalloped mutant clones, implies that scalloped- and ves

129 sory organ development and can rescue a wing scalloping mutant phenotype associated with loss of cut

130 Native RLC from scallop myofibrils was extracted and replaced completely

131 Single-headed scallop myosin (shM) was prepared by papain digestion of

132 prepared by papain digestion of filamentous scallop myosin and purified by hydrophobic interaction c

133 tion of the ATPase activity of single-headed scallop myosin by Ca2+ paralleled closely the Ca2+ bindi

134 ed coil rod, contribute to the regulation of scallop myosin by Ca2+.

135 disrupt their predicted interactions (using scallop myosin coordinates), we measured basal ATPase, V

136 The 3.1-A x-ray structure of the scallop myosin head domain (subfragment 1) in the ADP-bo

137 Docking of atomic models of scallop myosin head domains into the motifs reveals that

138 have determined the structure of the intact scallop myosin head, containing both the motor domain an

139 We conclude that in the "off" state, scallop myosin heads interact with each other, forming a

140 e entire coiled-coil, a study is made of the scallop myosin II S2 subdomain for which an x-ray struct

141 The mechanism of calcium regulation of scallop myosin is not understood, although it is known t

142 Here we report a 2.3-A crystal structure of scallop myosin S1 complexed with ADP.BeF(x), as well as

143 ermined a 3.2-A nucleotide-free structure of scallop myosin S1, which suggests that in the near-rigor

144 Atomic structures of scallop myosin subfragment 1(S1) with the bound MgADP, M

145 In scallop myosin, the region corresponding to Glu124-Arg14

146 und SH1 helix first seen in an unusual 2.5-A scallop myosin-MgADP structure and described as correspo

147 pin labels bound to the regulatory domain of scallop myosin.

148 Previous studies in vertebrate and scallop myosins have shown a correlation between actin f

149 8-mm diameter hole was punched in the middle scallop of the posterior mitral leaflet to create "pure"

150 overexpression in the chick limb results in scalloping of the AER and limb truncations, suggesting t

151 nts, fusion of the cerebral hemispheres, and scalloping of the dentate gyrus.

152 visualization of the MV (85% to 91% for all scallops of both MV leaflets), interatrial septum (84%),

153 he clip successfully approximated the middle scallops of the anterior and posterior leaflets in all 1

154 designed to grasp and approximate the middle scallops of the anterior and posterior mitral leaflets w

155 surgical technique approximating the middle scallops of the mitral leaflets to create a double orifi

156 Scallop Omega-crystallin (officially designated ALDH1A9)

157 Like other enzyme-crystallins, scallop Omega-crystallin appears to be present in low am

158 Here we have cloned the scallop Omega-crystallin gene.

159 -crystallins, which are tetrameric proteins, scallop Omega-crystallin is a dimeric protein.

160 ave a structure very similar to human ALDH2, scallop Omega-crystallin was enzymatically inactive with

161 s into zigzags, creating ridges and periodic scallops on membranes in vitro.

162 During "scallops", only DP-PCN neurons with high baseline firing

163 hologically, having a cylindrical shape with scalloped or "nibbled" edges.

164 Relative to mutations in scalloped or mastermind, a Chip mutation hypersensitizes

165 The CT scan showed scalloping over the right supra-orbital ridge with an in

166 om the different samples evaluated (mussels, scallops, oysters, clams, cockles) nor interference from

167 o the formation of remarkable patterns, like scallop patterns in caves.

168 efore used RAD sequencing to study the great scallop Pecten maximus and its sister species P. jacobeu

169 the cloning and sequencing of mtDNA from the scallop Pecten maximus, and were used to study genetic d

170 ave now determined the structure of the same scallop peptide in three additional crystal environments

171 two classes of visual cells, we examined in scallop photoreceptors the effects of several antagonist

172 Hyperpolarizing scallop photoreceptors, like vertebrate rods, use cGMP a

173 bay scallop Argopecten irradians and the sea scallop Placopecten magellanicus have pupils that constr

174 spin-labeled regulatory light chain (RLC) in scallop (Placopecten magellanicus) muscle fibers.

175 s monodon) off Peru;(12) and the increase in scallop (Placopecten magellanicus) numbers on Georges Ba

176 -3 fold higher than the StringTie system and Scallop plus TACO, the two best current approaches.

177 Since 2019, scallop populations in New York have been suffering larg

178 on plays a major role in the collapse of bay scallop populations in New York.

179 despread offshore wind farm constructions on scallop populations.

180 Scallop preserves long-range phasing paths extracted fro

181 On 10 human RNA-seq samples, Scallop produces 34.5% and 36.3% more correct multi-exon

182 gnificant jets, 15.0% severe bileaflet/multi scallop prolapse, 13.3% mitral valve orifice area <4.0 c

183 A TEA DNA-binding domain in the Scalloped protein binds the wing margin enhancer.

184 wing identity by forming a complex with the Scalloped protein that binds sequence specifically to es

185 that Vestigial requires the function of the Scalloped protein, a member of the TEA family of transcr

186 Many other organisms, such as scallops, rarely swim at Re less than 100.

187 rmined the crystal structure of a molluscan (scallop) RD in the absence of Ca(2+).

188 real bevacizumab results in a characteristic scalloped regression pattern that is highly associated w

189 edge in a stereotyped pattern, suggestive of scalloped regression.

190 sin molecule has been created by attaching a scallop regulatory domain to the end of each of the two

191 .01), hyporeflective vessels (P = 0.04), and scalloped retinal layers (P = 0.006).

192 scans for (1) retinal vessel elevation, (2) scalloped retinal layers, (3) hyporeflective vessels, an

193 The scallop's large striated muscle is energy-dynamic but no

194 of those genes may have profound effects on scallop's phenotype and adaptation.

195 on for destabilization of this helix in some scallop S1 but not in other S1 isoform structures.

196 with the previously determined structure of scallop S1 complexed with MgADP (which we interpret as a

197 ule at this resolution: it too resembles the scallop S1 crystal structure.

198 monly closely resemble the appearance of the scallop S1 structure rather than the methylated chicken

199 The rate of monofunctional labeling of scallop S1 was increased in the presence of MgADP and Mg

200 factors that influence the SH1-SH2 helix in scallop S1 were examined using monofunctional and bifunc

201 by the initial attachment of the reagent to scallop S1.

202 ond between SH1 and SH2, were much faster in scallop S1.ADP than in rabbit skeletal S1.ADP and were r

203 so compared the melting temperatures of this scallop S2 peptide with those of analogous peptides from

204 imulations on an existing x-ray structure of scallop S2 yielded force spectra with either two or thre

205 onal activator [WWTR1]), coactivators of the Scalloped (Sd or TEAD) DNA-binding transcription factor.

206 turn interacts with its DNA-binding partner Scalloped (Sd) - this forces the eye to transform into a

207 hat the TEAD/TEF family transcription factor Scalloped (Sd) acts together with the coactivator Yorkie

208 Here we identify the TEAD/TEF family protein Scalloped (Sd) as a DNA-binding transcription factor tha

209 The TEAD/TEF factor Scalloped (Sd) has been identified as the first known tr

210 Surprisingly, expression of Yorkie (Yki) and Scalloped (Sd) in salivary glands fails to phenocopy wts

211 TEAD family DNA-binding transcription factor Scalloped (Sd) to drive the expression of growth-promoti

212 ulates downstream target genes together with Scalloped (Sd), a DNA-binding protein.

213 itively and negatively affect the binding of Scalloped (Sd), a transcription factor that is required

214 or Yorkie (Yki) and the transcription factor Scalloped (Sd), leading to activation of Yki target gene

215 a complex with Yki and its binding partner, Scalloped (Sd), on target-gene promoters and is essentia

216 a complex with DNA-binding proteins such as Scalloped (Sd).

217 the TEAD/TEF family of transcription factor Scalloped (Sd).

218 A characteristic scalloping seen on imaging (depression in the outer or i

219 The Scalloped selector protein controls wing development in

220 d by Drosophila TCF (dTCF) and the Vestigial/Scalloped selector system and that temporal control is p

221 re sensitive to interindividual variation in scallop sequences, raising the question of whether fish

222 uorescence, it localized in densely staining scalloped-shaped distortions of the nuclear membrane in

223 Scallops showed no acclimatization to repetitive pile dr

224 Furthermore, scallops showed persistent alterations in recessing refl

225 licit energetically expensive behaviors, but scallops showed significant changes in behavioral patter

226 le frequencies in Aequipecten opercularis, a scallop species with a similar distribution and life his

227 the alphaTN4-1, L929, and Cos7 cells and the scallop stomach and oligonucleotides derived from the pu

228 In scallop striated adductor muscle, the disordering that t

229 position of Tm in native thin filaments from scallop striated adductor muscle.

230 s completely and specifically extracted from scallop striated muscle fibers, eliminating the Ca sensi

231 t (51 residues plus a leucine zipper) of the scallop striated muscle myosin isoform.

232 structure of a proteolytic subfragment from scallop striated muscle myosin, complexed with MgADP, ha

233 a leucine-zipper-stabilized fragment of the scallop striated-muscle myosin rod adjacent to the head-

234 the motifs are similar in both systems, the scallop structure is more tilted and higher above the fi

235 ing the question of whether fish may analyze scallop structure to gain information about the sender.

236 front door." In addition, using a variety of scallop structures, including a relatively high-resoluti

237 -0.6 mm apically away from the anterolateral scallop; such displacement correlated with lateral displ

238 We show that binding of Vestigial to Scalloped switches the DNA-binding selectivity of Scallo

239 Prominent multi-scallop systolic leaflet displacement toward the left at

240 cofactors that interact with members of the Scalloped/TEAD family of transcription factors and modul

241 a member of the ATTS/TEA (AbaA, TEF-1, TEC1, Scalloped/TEF-1, TEC1, AbaA) class of transcription fact

242 rved in Drosophila Yki (the YAP homolog) and Scalloped (the TEAD homolog).

243 It is shown that SCALLOPED, the DNA binding component of the selector pro

244 We provide evidence that Yorkie and Scalloped, the Drosophila homologs of YAP and TEAD, are

245 with a physical principle to circumvent the scallop theorem and realize acoustic-based propulsion at

246 We show that the constraints of the scallop theorem can be escaped in frictional media if tw

247 We take inspiration from the scallop theorem proposed by Purcell for micro-swimmers i

248 The Scallop theorem states that reciprocal methods of locomo

249 number is subject to the constraints of the scallop theorem, which dictate that body kinematics iden

250 hich was divided into three categories: thin-scalloped, thick-flat, and thick-scalloped.

251 of Tm is consistent with the hypothesis that scallop thin filaments are Ca(2+) regulated.

252 on vehicles of transmission were undercooked scallops (three outbreaks caused by enterotoxigenic Esch

253 Results showed that BSM disrupts multiple scallop tissues including kidney, adductor muscle, gill,

254 t that Vestigial affects the conformation of Scalloped to create a wing cell-specific DNA-binding sel

255 mastermind and Chip act synergistically with scalloped to regulate the wing margin enhancer.

256 The scallop uses hepatopancreas to accumulate neurotoxins an

257 the impact of exposure to seismic surveys on scallops, using measurements of physiological and behavi

258 ceptor pathway in the wing margin, including scalloped, vestigial, mastermind, Chip, and the Nipped l

259 ent of the posteromedial edge of the central scallop was 1.4+/-0.9 mm anteriorly and 0.9+/-0.6 mm lat

260 stole, the anterolateral edge of the central scallop was displaced 0.8+/-0.9 mm laterally and 0.9+/-0

261 ich interact with the ELC (Ca(2+) binding in scallop), was sufficient to abolish motility and diminis

262 y adding long-read-specific optimizations to Scallop, we developed Scallop-LR, a reference-based long

263 Yorkie and its partner transcription factor Scalloped were found to regulate transcription of the Ru

264 an individually stereotyped signal called a scallop, which consists of a distinctive temporal patter

265 Malcoaptation of the scallops within the posterior leaflet during acute left

266 ree-dimensional dynamics of the 3 individual scallops within the posterior mitral leaflet during acut