ライフサイエンスコーパス: sorting

1 sent a mechanism of receptor trafficking and sorting.

2 ed through computational prediction and self-sorting.

3 comparable to those achieved by careful hand-sorting.

4 relevant platforms for regulating endosomal sorting.

5 constriction sorter device for length-based sorting.

6 ar genes is suggestive of incomplete lineage sorting.

7 nuclei were subjected to two-parameter flow sorting.

8 was assessed by fluorescence-activated cell sorting.

9 ving the performance and automation of spike sorting.

10 nto two-component nanofibers instead of self-sorting.

11 peed and high-throughput image-assisted cell sorting.

12 only sequencing read alignments without cell sorting.

13 es associated with HSC activity without cell sorting.

14 tion by magnetic sorting and FRET-based flow sorting.

15 heteroternary complexes through social self-sorting.

16 uality control of inner membrane preproteins sorting.

17 B cell (sub)populations, without prior cell sorting.

18 ences in intercellular adhesion mediate cell sorting.

19 tion followed by fluorescence-activated cell sorting.

20 such as hybridization or incomplete lineage sorting.

21 amples in 6 h and demonstrate its utility by sorting 25 nL droplets containing transaminase expressed

22 f its major components, the vacuolar protein sorting 35 (VPS35), has been reported in Alzheimer's dis

23 ponents ESCRT-III and VPS4 (vacuolar protein sorting 4).

24 ic immune response is driven by the clathrin-sorting adaptor AP-1B, which mediates the polarized sort

25 platform conducive to the binding of the TLR sorting adaptor Toll-IL1 receptor (TIR) domain-containin

26 ccuracy using a self-correcting and adaptive sorting algorithm.

27 enchmarks the performance of automated spike sorting algorithms across an extensive, curated database

28 esign, and (iii) the emergence of novel self-sorting algorithms allows multiple of these interactions

29 un, compare, and benchmark most modern spike sorting algorithms; pre-process, post-process, and visua

30 robust to high levels of incomplete lineage sorting also appear to be robust to the inclusion of par

31 Microscopy and fluorescence-activated cell sorting analyses suggest that most BAs are mononuclear a

32 ibroblasts, with fluorescence-activated cell sorting analysis revealing that a small percentage of hu

33 4 kinase (PI4KII)-dependent early endosomal sorting and accumulation of phosphatidylinositol 4-phosp

34 a series of PRV mutants deficient in axonal sorting and anterograde spread, we identified the PRV US

35 The Sorting and Assembly Machinery (SAM) complex consists of

36 (BAM) in Gram-negative bacteria, and by the sorting and assembly machinery (SAM) in mitochondria.

37 methods of accomplishing this, such as cell sorting and baiting; however they are time consuming and

38 izure invasion that impede traditional spike sorting and could be used as defining characteristics of

39 ominent role by regulating protein and lipid sorting and degradation.

40 were assessed by fluorescence-activated cell sorting and degranulation, respectively.

41 and ESCRT-III-dependent pathway promotes the sorting and delivery of tetraspanins to exosomes.

42 reflect histories of introgression, lineage sorting and divergence.

43 n also acts in cargo trafficking pathways by sorting and docking cargos for translocon-mediated trans

44 -0, -I, and -II presumably involved in cargo sorting and ESCRT-III in membrane deformation and fissio

45 cess of endosomal fission and connecting the sorting and fission machineries.

46 nabling enrichment and isolation by magnetic sorting and FRET-based flow sorting.

47 ch that incorporates both incomplete lineage sorting and hybridization.

48 This study utilised cell sorting and immunohistochemistry to identify a phenotypi

49 ed for Eph receptor B2 (EphB2)-mediated cell sorting and is conserved among multiple Eph receptors.

50 stable isotope probing, Raman-activated cell sorting and mini-metagenomics.

51 complex, implicated in intracellular protein sorting and packaging.

52 iferation of studies of circulating microRNA sorting and regulation across cells and different specie

53 The TGN is a key compartment for the sorting and secretion of newly synthesized proteins.

54 Through cell sorting and selection according to insulin promoter acti

55 the GLUT4-containing region of the TGN as a sorting and storage site from which different cargo are

56 y of circulating microRNAs in terms of their sorting and targeting, with the goal of providing practi

57 a multimodular protein assembly critical for sorting and trafficking cargo out of the endosome.

58 nt evidence has implicated defective protein sorting and trafficking secondary to deficiencies in ret

59 KIF1A to viral transport vesicles for axonal sorting and transport and eventually accelerates the pro

60 nesin-3 motor, mediates the efficient axonal sorting and transport of newly assembled PRV virions.

61 on of KIF1A, a kinesin-3 motor promoting the sorting and transport of PRV virions in axons.

62 pical, but not basolateral, membrane protein sorting and transport.

63 Fluorescence activated cell sorting and Western blot were performed in patient-deriv

64 uments community progress in automated spike sorting, and guides neuroscientists to an optimal choice

65 , ELISA, UniCAP, fluorescence-activated cell sorting, and PCR.

66 nly contribute to secretory protein folding, sorting, and signaling.

67 Here, using a single-cell sorting approach combining tubulin-specific labelling wi

68 (qPCR) analysis, we found that our inertial sorting approach has nearly 3-fold improvement on the pa

69 me lineage can adopt opposing positions when sorting as individuals or a collective.

70 tion and desensitization, and post-endocytic sorting, as well as region-specific expression at the mR

71 , we developed a fluorescence-activated cell sorting assay based on fluorescence ubiquitination cell

72 han 92%, demonstrating a size-based inertial sorting at submicron resolution (i.e., 0.5 mum).

73 The present inertial sorting at submicron resolution provides a simple, rapid

74 isolated from blood samples by magnetic bead sorting at the point of diagnosis and during the course

75 nse to nutrient availability governs protein sorting at the TGN, likely by regulating sterol transfer

76 EM16K lipid scrambling activity in endosomal sorting at these sites.

77 Using fluorescence-activated cell sorting, B-cell subsets were analyzed.

78 s on a target gene's expression in a pooled, sorting-based expression screen.

79 Our cell sorting-based study of the epidermal cell layer transcri

80 ies display the spacer-length-dependent self-sorting behavior in a four-component system.

81 We were especially interested in whether sorting behavior in each display format was based on con

82 uloid cells exhibit evolutionarily conserved sorting behaviors.

83 ce response that presents as classic species sorting, but is nevertheless accompanied by rapid within

84 adherin-based cell-cell adhesion induce cell sorting, but not ECD.

85 re we demonstrate Raman image-activated cell sorting by directly probing chemically specific intracel

86 microfluidic technique developed in our lab, Sorting by Interfacial Tension (SIFT), to isolate cancer

87 sicles maturation, especially involving the "sorting by retention" process and concentration increase

88 Here, we describe how 3D particle sorting can enrich targets at ultralow concentrations ov

89 nses, we intensify the field gradient within sorting channels.

90 asts, which was successfully applied to flow-sorting chromosomes of sheep, with a focus on isolation

91 We used cell sorting combined with RNA sequencing to isolate stellate

92 The endosomal sorting complex required for transport (ESCRT) machinery

93 The endosomal sorting complex required for transport (ESCRT) plays a c

94 hinery through upregulation of the endosomal sorting complex required for transport (ESCRT) proteins.

95 These proteins are members of the endosomal sorting complex required for transport (ESCRT), a cellul

96 rget cell, and the function of the endosomal sorting complex required for transport (ESCRT)-associate

97 In mammalian cell lines, the endosomal sorting complex required for transport (ESCRT)-III media

98 g ubiquitination of the ESCRT-III (endosomal sorting complex required for transport III) component CH

99 ve the late-acting cellular ESCRT (endosomal sorting complex required for transport) components ESCRT

100 tion with components of the ESCRT (endosomal sorting complex required for transport) pathway.

101 The endosomal sorting complex required for transport-III (ESCRT-III) c

102 We propose that the PRV anterograde sorting complex, gE/gI/US9, recruits KIF1A to viral tran

103 hyperactive Vps34 does not affect endosomal sorting complexes required for transport (ESCRT) functio

104 CHMP2B, encoding a protein in the endosomal sorting complexes required for transport (ESCRT) machine

105 The endosomal sorting complexes required for transport (ESCRT) mediate

106 lysosomal degradation pathway, the endosomal sorting complexes required for transport (ESCRT-0 to -II

107 The endosomal sorting complexes required for transport (ESCRTs) are es

108 The endosomal sorting complexes required for transport (ESCRTs) mediat

109 of sealed nuclei requires ESCRTs (endosomal sorting complexes required for transport) and LEM2, a tr

110 s accumulate over time, use ESCRT (endosomal sorting complexes required for transport) machinery for

111 ycolysis without the use of labels or active sorting components.

112 ion phenotype was stable over multiple days, sorting cycles, and common across all epithelial tumor l

113 Developmental and post radial sorting defects contributed to altered nerve fiber densi

114 channel design for an inertial microfluidic sorting device by embedding microsquares to construct pe

115 This inertial sorting device has successfully separated 5.5 mum partic

116 next isolated a subset of sensory neurons by sorting DRG neurons back-labeled from paw and thigh musc

117 on determines available niche space, species sorting dynamically alters composition, changing over ti

118 ed as important players in endosomal protein sorting, dynamics and motility.

119 ength and dielectrophoretic characteristics, sorting efficiencies for long and short SWNTs recovered

120 Microfluidic droplet sorting enables the high-throughput screening and select

121 hrin-independent and does not associate with sorting endosome marker EEA1.

122 assical pathway involving dynamin, clathrin, sorting endosomes and Golgi trafficking where the cargo

123 ocytosis, receptors that are internalized to sorting endosomes are sorted to different pathways, in p

124 s bud and undergo vesicular fission from the sorting endosomes remain elusive.

125 The droplet guiding and sorting experiments are complemented by modeling of the

126 by modeling the distribution of cells across sorting expression bins.

127 plastic packaging waste streams in European sorting facilities.

128 Fluorescence-activated cell sorting (FACS) and confocal microscopy showed that the d

129 We use fluorescence-activated cell sorting (FACS) and genomic sequencing to assign taxonomy

130 were purified by fluorescence-activated cell sorting (FACS) protocol resulting in >= 99% purity and >

131 ll type, we used fluorescence-activated cell sorting (FACS) to sort the glial and vascular cells from

132 ify by combining fluorescence-activated cell sorting (FACS) with annexin V staining.

133 ypic analysis by fluorescence-activated cell sorting (FACS), a CRISPR-Cas9-mediated approach was used

134 ters purified by fluorescence activated cell sorting (FACS).

135 ut screening via fluorescence-activated cell sorting (FACS).

136 combination with fluorescence-activated cell sorting (FACS).

137 h were sorted by fluorescence activated cell sorting (FACS).

138 librium by-products is overcome through self-sorting favored by the introduction of designed shape-co

139 ng platform based on flow cytometric droplet sorting (FCDS).

140 We combine sequencing, flow cytometry and sorting, followed by microscopy to monitor gene expressi

141 e isolated using fluorescence activated cell sorting for bulk RNA sequencing (RNA-Seq).

142 d to overcome the Poisson loading problem by sorting for droplets containing a single red blood cell

143 nalyze the sensitivity of size-based droplet sorting for varying flow conditions.

144 consisting of analysis to define the optimal sorting frequency followed by separation of cells at tha

145 lls suitable for fluorescence-activated cell sorting from human islets engrafted in mice.

146 Although sorting has previously been attributed to intrinsic diff

147 ectodermal and endodermal lineages to drive sorting have not been fully elucidated.

148 Identifying and sorting highly tumorigenic and metastatic tumor cells fr

149 thering homotypic fusion and vacuole protein sorting (HOPS) complex, was recently identified as a cyt

150 of the homotypic fusion and vacuole protein sorting (HOPS) complex, which plays a key role in autoph

151 known roles in homotypic fusion and protein sorting (HOPS)-mediated vesicle tethering, are required

152 tionary processes such as incomplete lineage sorting, hybridization/introgression and polyploidizatio

153 es of discordance include incomplete lineage sorting (ILS) and introgression, but only ILS has receiv

154 led by hybridization [9], incomplete lineage sorting (ILS), or sex-biased dispersal patterns [10], wh

155 or required for dynein-dependent microtubule sorting in axons of Drosophila neurons.

156 Here, we discuss GLUT4 sorting in different species and how studies of CHC22 ha

157 ul tool for high-throughput, size-based cell sorting in diverse biomedical applications.

158 anslation initiation, and protein processing/sorting in the Endoplasmic Reticulum (ER)-Golgi in a tem

159 nd a proteoglycan mediate lipoprotein lipase sorting in the TGN.

160 Retinal endothelial cell sorting in wild type C57BL/6 mice was validated by compa

161 ere evaluated by fluorescence-activated cell sorting; interleukin 10 (IL-10) and IL-18 and soluble FA

162 rticles would have a limited time window for sorting into and transport in axons for further host-to-

163 Yet, it remains unresolved how sorting into diverging vesicular routes is spatially org

164 ar transport by binding to cargoes for their sorting into intracellular pathways.

165 Second, we incorporate DCJ sorting into the IDQPSO (IDQPSO-Median).

166 Spike sorting is a crucial step in electrophysiological studie

167 phogen transport together with directed cell sorting is a potentially favored mechanism to establish

168 libraries, single cells are isolated by FACS sorting, lysed and digested by MNase.

169 As a consequence of the perturbed AP-1 sorting, m154 promotes lysosomal degradation of several

170 timize a protocol of magnetic-activated cell sorting (MACS) to separate them effectively both as viab

171 essfully enriched from hNSPC cultures by DEP sorting, making this the first study to use electrophysi

172 Here, we report on a self-sorting mechanism by which multiple mRNAs derived from t

173 g-standing hypotheses regarding the retromer sorting mechanism posit that oligomeric interactions bet

174 ticle flow cytometer with a gentle pneumatic sorting mechanism to process and spectrally sort live an

175 III) and chronically infected individuals by sorting memory CD4+ T-cell subsets lacking or expressing

176 eloped a novel template-matching-based spike sorting method, which enabled identification of 1239 sin

177 he exomer complex using a newly uncovered PM sorting motif.

178 a basic patch to recognize C-terminal acidic sorting motifs in AATs and thereby instructs Rsp5 to ubi

179 1-activated Art1 to detect N-terminal acidic sorting motifs within the same AATs, which initiates exc

180 are sorted to different pathways, in part by sorting nexin (SNX) proteins.

181 ase (Drs2-Cdc50), an F-box protein (Rcy1), a sorting nexin (Snx4-Atg20), and the COPI coat complex.

182 Acute renal depletion of sorting nexin 1 (SNX1) in mice results in blunted natriu

183 X domain of the novel D(1) R-binding partner sorting nexin 19 (SNX19) resulted in D(1) R partitioning

184 mined interactions between components of the sorting nexin 3 (SNX3)-retromer sorting pathway using qu

185 screens, we find that the endosomal protein sorting nexin 5 (SNX5)(3,4) is essential for virus-induc

186 target cell's plasma membrane and recruiting sorting nexin 9 (SNX9), a central multifunctional endocy

187 studies have revealed that retromer-related Sorting Nexin family (SNX)-Bin/Amphiphysin/Rvs (BAR) pro

188 closure, we investigated the role of Snx3, a sorting nexin gene.

189 ssible implication for overexpression of the sorting nexin in tumor samples.

190 Retromer and its associated sorting nexin, SNX27, phenocopied each other in matrix d

191 Sorting nexins (SNX) are a family of PX domain-containin

192 helps elucidate the intricate intracellular sorting observed in highly polarized cells such as neuro

193 neurodevelopment by mediating dynein-driven sorting of axonal microtubules.

194 -1B has a well-established role in polarized sorting of cargos to the basolateral membrane.

195 tion with Rab7a, which blocks the retrograde sorting of Cation-independent Mannose 6-Phosphate Recept

196 Upon fluorescence-activated cell sorting of each neutrophil subset, T-cell proliferation

197 revealed that Cav1 is required for exosomal sorting of ECM protein cargo subsets, including Tenascin

198 an autonomous, high-throughput mechanism for sorting of emulsion droplets with different sizes concur

199 s that involves the differential subcellular sorting of family-related synaptic proteins.

200 s a role for CHC22 in addition to retrograde sorting of GLUT4 after endocytic recapture, enhancing pa

201 This leads to the decreased sorting of hydrolases to lysosomes and reduces the autop

202 often requires laborious manual counting and sorting of individual specimens, usually via microscopy.

203 Sorting of integral membrane proteins from the trans-Gol

204 However, cell migration chromatography, the sorting of large populations of cells based on their mig

205 dy suggests Myr insertion is involved in the sorting of membrane lipids around the protein-binding si

206 ls for accurate molecular analysis, inertial sorting of micron-sized biological particles with submic

207 technologies for shape-based separation and sorting of microparticles like microplastics, cells, and

208 be a microfluidic system for high-throughput sorting of nanoliter droplets based on direct detection

209 R218Q, diverts dynein-mediated postendocytic sorting of nephrin from recycling endosomes to lysosomes

210 w that vacuolar H+-ATPase activity regulates sorting of O-glycosylated proteins at the TGN, as well a

211 We first reassess efficient sorting of phosphopeptides from nonphosphopeptides based

212 racting cells (PIC-seq), which combines cell sorting of physically interacting cells (PICs) with sing

213 TM regions of Mgr2 are essential for lateral sorting of preprotein into the inner membrane, as well a

214 assembly of the TIM23 complex during lateral sorting of preproteins are poorly understood.

215 he main ubiquitin ligase responsible for the sorting of proteins to the lysosomal vacuole is Rsp5, a

216 nse core, but the mechanisms controlling the sorting of regulated secretory cargoes (soluble and tran

217 The sorting of RNA molecules to subcellular locations facili

218 een two monomers induces an integrative self-sorting of rosettes.

219 1, which in turn determine the postendocytic sorting of signaling TrkB receptors.

220 technology enables real-time SRS-image-based sorting of single live cells with a throughput of up to

221 A FACS-based sorting of the library beads allowed recovery of hits im

222 es with class I MHC molecules that result in sorting of the oligomeric U21/class I MHC complexes to G

223 Genetic sorting of the scrolls illuminates their textual relatio

224 ccales order and provide a working model for sorting of these proteins.

225 promote the assembly of virus particles and sorting of these virions into neuronal axons.

226 adaptor AP-1B, which mediates the polarized sorting of Toll-like receptor 3 (TLR3) towards the basol

227 llowed by rapid flow, high-gradient magnetic sorting of untagged CTCs, provides a technology for noni

228 opes of Egyptian versus Levantine glasses to sorting of zircons in Nile sediments during longshore dr

229 ough a combination of class- and size-based "sorting" of molecules.

230 e cell composition quantification using cell-sorting or single-cell technologies.

231 We call these structures sorting organelles (SOs).

232 defined multicellular aggregates and monitor sorting outcomes by live imaging.

233 lular datasets; validate, curate, and export sorting outputs; and more.

234 While many spike sorting packages are available, there is little consensu

235 Free-sorting paired odour testing using sensory panellists id

236 ry, an automated technique for measuring and sorting particles, cells, and cell-clusters, is a potent

237 Here we investigate the sorting pathway for MYXO-CTERM proteins by using the Tra

238 nents of the sorting nexin 3 (SNX3)-retromer sorting pathway using quantitative single particle fluor

239 etic post-translational maturation, membrane sorting, pH homeostasis in recycling endosomes, and carg

240 se processes, including autophagy, endocytic sorting, phagocytosis, anabolic responses and cell divis

241 moiety, shows a propensity for a solid-state sorting phenomenon.

242 ing of the mechanistic interface between the sorting platform and the basal body of the injectisome.

243 for an interaction between proteins from the sorting platform and the IR.

244 nt of atomic-resolution models of the entire sorting platform and to our understanding of the mechani

245 The sorting platform consists of an ATPase (SctN) connected

246 ing three major components - the cytoplasmic sorting platform, envelope-spanning basal body and exter

247 tients were tested to evaluate the effective sorting power of the algorithm, yielding 95% power in ad

248 s and embryos remained intact throughout the sorting process and were successfully sorted based on re

249 ovided unique examples of a three-level self-sorting process, as only two imine-based ligand constitu

250 s well as (2) the thermodynamics of the self-sorting process, i.e., the distribution of assemblies at

251 ent agreement with a numerical model for the sorting process.

252 cess that may alter cell property during the sorting process.

253 a2+-mediated process that involves the cargo-sorting protein Cab45.

254 served overexpression of PACS-1, a cytosolic sorting protein in primary cervical tumors.

255 Phosphofurin acidic cluster sorting protein-1 (PACS-1) is a multifunctional membrane

256 We further consider how different sorting-protein complexes relate to these routes and dis

257 t that G-protein-coupled receptor-associated sorting proteins (GPRASPs) function as negative regulato

258 To this end, quantum parametric mode sorting (QPMS) can achieve signal to noise exceeding by

259 enotypes of the MA-ARB, Raman-activated cell sorting (RACS) was used to sort MA-ARB from human gut mi

260 rifluoroacetyl isocyanate followed by a self-sorting reaction with chloroacetyl isocyanate and 4-brom

261 member of the family of the Vps10 family of sorting receptors, is highly expressed in pyramidal neur

262 We developed a novel device that increased sorting reproducibility and provided both enriched and d

263 We implemented a two-step DEP sorting scheme, consisting of analysis to define the opt

264 Species interactions and species sorting set, respectively, the tempo and trajectory of e

265 that targets proteins displaying a cell wall sorting signal.

266 elivered to the vacuole using ubiquitin as a sorting signal.

267 of fluorescence labels has enabled new cell-sorting strategies and given new insights into developme

268 y, we refined and functionally validated the sorting strategy for the HSCs/MPPs and achieved around 9

269 Using a unique ZIKV virion-based sorting strategy, we isolated and characterized multiple

270 go protein or reducing vesicle size restores sorting stringency.

271 ase substrate (HRS), which was necessary for sorting surface receptors to intraluminal vesicles for s

272 ed to test the design of a "dual layer" self-sorting system in the presence of Cucurbit[8]uril (CB[8]

273 m, Myxococcus xanthus, a putative C-terminal sorting tag (MYXO-CTERM) is predicted to help direct 34

274 extent to which arrangements of objects in a sorting task were similar or different when the stimuli

275 ry T cells using fluorescence-activated cell sorting, TCRbeta sequencing, and RNA-Seq, in reactive an

276 The presented droplet sorting technique can find applications in the developme

277 roplet microfluidic, image-based single-cell sorting technique that is flexible and programmable.

278 croscopy and fluorescence-assisted organelle-sorting techniques.

279 ramework designed to unify preexisting spike sorting technologies into a single codebase and to facil

280 e HOPS (homotypic fusion and vacuole protein sorting) tethering and SNARE-assembly complex, and the R

281 We further employ our method to reveal that sorting the most migratory cytotoxic T lymphocytes yield

282 Stable patterning can be achieved by sorting through concentration dependent cell migration a

283 xosome biogenesis and exosomal protein cargo sorting through the control of cholesterol content at th

284 port from the endoplasmic reticulum (ER) and sorting to LBs, the conversion of proSP-B into lipoprote

285 whereas SMURF2 knockdown increases receptor sorting to lysosomes.

286 very, improving the applicability of droplet sorting to protein engineering, drug discovery, and diag

287 sive hypercholesterolemia protein (ARH), for sorting to the basolateral membrane.

288 ltaneously, it becomes possible to visualize sorting to the constitutive and regulated secretory path

289 s promise for applications ranging from cell sorting to three-dimensional (3D) printing and tissue en

290 Reassembly begins by sorting two epithelial cell types, endoderm and ectoderm

291 nrichment of Ag-specific B cells by magnetic sorting using the same tetramers prior to hybridoma gene

292 Size-based sorting using this merging phenomenon is subsequently de

293 luorescent), processing, decision making and sorting verification.

294 ter VPS13, humans have four vacuolar protein-sorting (VPS) protein 13 isoforms.

295 ing Pearson's correlation coefficient, spike-sorting, wavelet transform, and wavelet coherence of cal

296 k chemistry in bacteria with high-throughput sorting, we developed a method to quantitatively select

297 ternate, single, double, and triple droplets sorting were achieved.

298 mbryo digestion, fluorescence-activated cell sorting, whole-genome sequencing and data analysis.

299 ing chronic demyelination paradigms and cell sorting with RNA sequencing and lipidomics, we find that

300 timer and flow cytometry-assisted organelle sorting, Yau et al. develop an elegant approach to asses