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1 nterspersed with short, variable sequences ('spacers').
2 g the length of promoter non-optimal -35/-10 spacer.
3 mido)-hexaethyleneglycol] ester (SM(PEG)(6)) spacer.
4 ome oxidase gene subunit II - the intergenic spacer.
5 uid cultures, most bacteria acquire a single spacer.
6 or without (1) an extended, self-immolative spacer.
7 be improved by the use of an electrophoretic spacer.
8 ce and with no need of the long and flexible spacer.
9 to the grid via a polyethylene glycol (PEG) spacer.
10 orphologies that contain cells with multiple spacers.
11 ciation (GBA), and CRISPR-Cas self-targeting spacers.
12 er mechanism that favors shorter repeats and spacers.
13 rnating repeat sequences and foreign-derived spacers.
14 mbly junctions within the trimmed portion of spacers.
15 n DNA acquired from these invaders, known as spacers.
16 and have unusually short CRISPR repeats and spacers.
17 ensures optimal immunity from newly acquired spacers.
18 es flanking less well-conserved 12- or 23-bp spacers.
19 when employing a racemic mixture of organic spacers.
20 carboxyl-decorated tetraphenylethylene (TPE) spacers.
21 he cassettes contain several dozen expressed spacers.
23 Genotyping based on internal transcribed spacer 1 (ITS1) and ITS2 of the rRNA operon has played a
26 sectional study, we use internal transcribed spacer 1 amplicon sequencing to evaluate the salivary my
29 loci such as 5.8S rRNA, Internal Transcribed Spacer 2, and 28S rRNA regions, which are commonly used
30 ine, benzimidazole, piperidine) and alkylene spacers (2 to 10 methylene groups between carbamate and
33 actors, including the choice of single-chain spacer(6) and extracellular(7) and costimulatory domains
38 nding of the molecular mechanisms underlying spacer acquisition and that have revealed a fundamental
41 eviously acquired spacers promote additional spacer acquisition from the vicinity of the target DNA s
43 reign transcripts, most contain conventional spacer acquisition machinery found in DNA-targeting syst
45 RISPR-Cas immune response and correlate with spacer acquisition rates, but not with spacer targeting
46 ich can respond with both single or multiple spacer acquisition schemes to solve challenges presented
48 Our findings have implications for CRISPR spacer acquisition, off-target potential of CRISPR gene
49 rall, our study provides a complete model of spacer acquisition, which can be harnessed for DNA-based
52 oli host 3'-5' exonucleases DnaQ and ExoT in spacer adaptation and reveal a mechanism by which spacer
55 patients managed with retained "destination spacers" after the resection of infected joint prosthese
58 ylum Bacteroidetes as demonstrated by CRISPR spacer analysis and by analysis of genes acquired by pha
60 pecific for the target, followed by a carbon spacer and a sequence specifically designed not to bind
61 oreactivity increased with the length of the spacer and correlated well with the rate constants estim
64 al viruses carry mini-CRISPR arrays with 1-2 spacers and preceded by leader sequences but devoid of c
65 idual CRISPR RNAs that each include a single spacer, and direct Cas proteins to complementary sequenc
66 apturing short invader DNA sequences, termed spacers, and incorporating them into the CRISPR loci of
67 termed prespacers, into the CRISPR array as spacers, and interference, the targeted degradation of D
69 mulations of model proteins with sticker-and-spacer architectures shed light on the formation of biom
71 be coupled with primed adaptation, in which spacers are acquired from DNA surrounding the targeted p
72 strain is exposed to a microbial sample and spacers are acquired from transferred plasmids and perma
74 ax volcanii and Haloferax mediterranei, that spacers are indeed acquired chromosome-wide, although a
80 ort pieces of the invader's genome, known as spacers, are captured and integrated into the CRISPR loc
83 e (DSSO) to better understand the effects of spacer arm modulation on MS-cleavability, fragmentation
85 fore, CRISPR immune cells acquire additional spacers at the same time as they destroy the infecting v
88 demonstrate that incorporating a nonadhesive spacer between (KY) repeats can mimic the hidden length
90 equence repeats to the docking strand, and a spacer between the docking strand and the affinity agent
91 ticle spacing through changes to the polymer spacer between the hydrogen bonding groups and the nanop
93 vations suggest that during translation, the spacer between the SD sequence and P-site codon undergoe
94 ination rate with the introduction of an hBN spacer between WSe(2) and MoS(2), Auger-type and exciton
95 exes (TTCs) containing different-length mRNA spacers between RNAP and the ribosome active-center P si
96 netration, while the use of optimized-length spacers between the Cu-chelating group and the Abeta-int
98 ional and taxonomic profiles for 2.9 million spacers by aligning the spacer content to each sample's
99 zone functionalized with a C6 alkyl thiolate spacer (C6 HAT) was characterized on a number of metal s
100 ve been conducted, showing that the thin GaN spacer can effectively balance the hole concentration be
101 at single-bp changes, including in the 12RSS spacer, can significantly and selectively alter PC forma
104 Here we demonstrate that the selection of spacer cations (i.e., selective fluorination of phenethy
105 so far proven inaccessible using traditional spacer cations due to either intrinsic instability or fo
106 work provides key missing information on how spacer cations exert influence on desirable electronic p
107 s are formed by the incorporation of organic spacer cations into three-dimensional (3D) double perovs
108 rangements and orientational disorder of the spacer cations result in orientational degeneracy and di
109 ferred molecular configuration of the chiral spacer cations, R-(+)- or S-(-)-1-(1-naphthyl)ethylammon
111 n the ratio of molar fluxes and the ratio of spacer channel ion concentrations, regardless of operati
112 hallower dependence on the number of proline spacers compared to the analogous electron transfer (ET)
113 perform deep sequencing of the CRISPRome-all spacers contained in a microbiome-associated with hypert
114 es during reimplantation was 9.5% for cement spacers containing a glycopeptide (27/284) (with or with
115 nd the transcripts are processed to generate spacer-containing mature CRISPR-RNAs that are employed a
116 iles for 2.9 million spacers by aligning the spacer content to each sample's metagenome and correspon
118 her appropriate changes in the nature of the spacer could modulate the intramolecular BP/Thy photorea
121 We have designed and used four different spacers, denoted A-D, to connect two pentacenes and to p
122 which does not cleave proteoglycans, caused spacer-dependent reductions in versicanase activities.
125 binding VWF, the ADAMTS13 cysteine-rich and spacer domain exosites bring enzyme and substrate into p
126 rk on ADAMTS-13 our results suggest that the spacer domain hypervariable loops may exercise significa
127 bstitution of two hypervariable loops in the spacer domain of ADAMTS-5 (residues 739-744 and 837-844)
129 9-Val-730 and Glu-732-Ala-733 in the ADAMTS7 Spacer domain, which was corroborated by N-terminal sequ
130 tion was reported for the acquisition of new spacers during CRISPR adaptation, and prokaryotic genome
132 eats-CRISPR-associated proteins (CRISPR-Cas) spacers elucidated lineage-specific virus-host dynamics
137 e 1 in rats, the introduction of a methylene spacer facilitated prodrug activation, but parent exposu
138 This allows to create a Si(111)|organic-spacer|Fc hybrid interface, where the ferrocene moiety i
140 a 3-(aminomethyl)piperidinium (3AMP) organic spacer for the fabrication of mixed Pb/Sn-based perovski
141 single sampling site dwarf the diversity of spacers from all available Sulfolobales isolates and dis
142 ms encode a reverse transcriptase to acquire spacers from foreign transcripts, most contain conventio
144 tally investigate the properties of galfenol/spacer/galfenol structures in which the compositions of
146 tivity relationship investigation of various spacers guided by molecular modeling studies helped to i
147 and the blue InGaN quantum well, a thin GaN spacer has been introduced prior to the blue InGaN quant
148 d to the piperidine amine (i.e., lacking the spacer) have decreased binding affinity and residence ti
152 define the role of antibiotics in the cement spacer in relation to reimplantation cultures and subseq
154 PhiNM1, PhiNM4 and Phi12 can recombine with spacers in either chromosomal or plasmid-borne CRISPR lo
155 mportant for selection and processing of new spacers in naive adaptation, was also essential for prim
159 n to crRNA is determined to be universal and spacer-independent for enhancing the sensitivity and spe
160 n of 2 mm spermidine quenched the off-target spacer insertion rate by a factor of 20-fold, and, in th
163 and Cas2 are directed to catalyze full-site spacer integration at specific DNA stretches where guani
167 to coordinate directional and site-specific spacer integration into the CRISPR locus to ensure preci
169 put sequencing, we identified high frequency spacer integration occurring at the same CRISPR repeat b
170 hat purified Cas1 and Cas2 proteins catalyze spacer integration with high specificity for CRISPR repe
171 I (LAttice simulation engine for Sticker and Spacer Interactions) that enables the calculation of ful
178 anger sequencing of the internal transcribed spacer (ITS) and D1/D2 regions of the ribosomal gene for
179 h great accuracy, while internal transcribed spacer (ITS) and D1/D2 sequencing were successfully empl
180 isolated, and a fungal internal transcribed spacer (ITS) clone library survey was performed on dust
181 alysis of the ribosomal internal transcribed spacer (ITS) from specimens obtained from humans, domest
183 ) rRNA genes and fungal Internal Transcribed Spacer (ITS) rDNA sequences, samples contained high dive
185 e-the nuclear ribosomal internal transcribed spacer (ITS) region-and offers all ~1 000 000 public fun
187 variants provides a continuous source of new spacers leading to high overall level of spacer acquisit
189 rrelation between the functional potency and spacer length of the ligands was observed, an observatio
190 The dimeric capsular assemblies display the spacer-length-dependent self-sorting behavior in a four-
191 Cross-linking with reagents that differ in spacer lengths and targeting residues increases the spat
195 h numerous overlapping genes, highly reduced spacers, loss of all cis-spliced introns, and shrunken p
196 H(2))(2) (+); A' = ammonium cation acting as spacer; M = Ge(2+), Sn(2+), Pb(2+); and X = Cl(-), Br(-)
197 be 'naive', i.e. independent of any existing spacer matches, or it can be 'primed', i.e. spurred by t
199 MGE carrying type I-B CRISPR-Cas systems and spacers matching other thaumarchaeal iMGE, suggesting an
200 ost contains a CRISPR-Cas system with CRISPR spacers matching protospacers within the inverted duplic
201 the development of a numerical stickers-and-spacers model that enables predictions of full binodals
205 CH(3)(CH(2))(5)NH(3)(+), C6) as the organic spacer molecules between the inorganic slabs, creating t
206 The increase in the length of the organic spacer molecules did not affect their optical properties
207 RC2 engages two nucleosomes separated by one spacer nucleosome, is a preferred low-energy configurati
208 lly reduce knockdown to a modest degree, but spacer nucleotides 15-21 are largely intolerant of targe
209 of the epitope, affinity and immobilization spacer of PBs as well as the influence of stop-flow dyna
210 RNA, D2-D3 of 28S rRNA, internal transcribed spacer of rRNA, mitochondrial cytochrome oxidase subunit
219 d Gag processing: the cleavage of the capsid-spacer peptide 1 (CA-SP1) intermediate to mature CA.
220 t that spans the junction between the CA and spacer peptide 1 (SP1) subunits of Gag, and interfere wi
221 ly conserved positions within the capsid and spacer peptide 1 domains of Gag that confer resistance.
222 e capsid (CA) domain of Gag and the flanking spacer peptide SP1 that stabilize VLPs, but much less is
223 Increasing its N-tail length with uncharged spacer peptides led to YidC dependence and eventually Yi
224 ad group and an antagonist-like oxypropylene spacer possess significant intrinsic activity for the ac
225 ere, we demonstrate that previously acquired spacers promote additional spacer acquisition from the v
229 sequencing) and fungal (internal transcribed spacer region amplicon sequencing) communities across re
230 ationship between the structure of the AdE1A spacer region and oncogenicity of HAdVs, the structures
232 genicity related to the presence of a unique spacer region located between conserved regions 2 and 3
233 on the sequence of the internal transcribed spacer region of fungal ribosomal RNA encoding genes dem
234 ion between P54nrb and RNase H1 requires the spacer region of RNAse H1, while the P54nrb core domains
235 ering a hairpin secondary structure onto the spacer region of single guide RNAs (hp-sgRNAs) can incre
236 ng of the ribosomal RNA internal transcribed spacer region to examine the microdiversity within this
237 cal or very similar to the adenovirus 12 E1A spacer region were determined and found to be alpha-heli
239 uence, belonging to the Internal Transcribed Spacers region, was used to design the real-time PCR det
240 ions based on ribosomal internal transcribed spacer regions (ITS1/2) and expanded protein functional
241 ble predictive algorithms, the structures of spacer regions from other E1As were also examined, and t
242 for 5, we sequenced the internal transcribed spacer regions, and for 4 others the whole genomes.
244 antimicrobial suppression after destination-spacer retention did not significantly prevent reinfecti
246 somal assembly - the 5' external transcribed spacer ribonucleoprotein - provides a mechanism for how
248 (D), thrombospondin-1 (T), Cys-rich (C), and spacer (S) domains (proximal domains), followed by 7 T a
249 (D), thrombospondin-1 (T), Cys-rich (C), and spacer (S) domains, followed by 7 additional T domains a
250 Chiral organic dyes comprising a donor (D), spacer (S), primary acceptor (A1), chiral bridge (B(S)),
253 d and processed into individual CRISPR RNAs, spacer sequences guide Cas effector nucleases to destroy
254 rally defends against RNA phages(8), type VI spacer sequences have exclusively been found to match th
257 ave very large genomes and since having more spacers should confer a better memory, it is puzzling th
260 and could perform independent leader-side or spacer-side insertions, although the leader-side inserti
263 s, each containing a Zn(2+)-binding G5 and a spacer subdomain, is responsible for Zn(2+)-dependent as
266 r genetic and genomic evidence suggests that spacer-targeted elements preferentially associate with l
271 orinated chain made of a propyl hydrogenated spacer terminated by a perfluorinated core of various le
272 93-111 in SNAP25 act as a flexible molecular spacer that ensures efficient coupling of the SNAP25-zDH
273 imR binds to an unusual operator with a long spacer that interacts nonspecifically with the receptor
274 y, in full-length Bs-FtsZ, the CTL acts as a spacer that spatially separates the CTP sticker from the
277 g 2 naltrexone units through a rigid pyrrole spacer, the bivalent ligand norbinaltorphimine was forme
278 ERS (E = EC, R = Repeating sequence, and S = Spacer), these strategies can be easily integrated into
279 have a second nucleobase attached via amide spacer to a side chain at Cgamma on the repeating aeg un
280 t the crRNA-guided acquisition of additional spacers to achieve a more rapid and robust immunization
281 t are brought about by imperfect matching of spacers to the integrated phage sequences (prophages).
282 The effect of ethyne, ethene, and phenyl spacer units between the radical center and the incipien
283 vestigate DNA elements that control accurate spacer uptake in the type II-A CRISPR locus of Streptoco
284 in a metered-dose inhaler with or without a spacer, variability in peak expiratory flow of more than
286 were deleted, uptake of correctly processed spacers was observed, indicating that none of these inte
292 Immune memories are stored in the form of 'spacers' which are short DNA sequences that are captured
293 ribosomal RNA at the 5' external transcribed spacer, which directs the early association of assembly
294 ion depended on sequence elements within the spacer, which in turn determined the abundance of differ
295 sition of short viral DNA sequences known as spacers, which are transcribed into short RNA guides to
296 hat shape the distribution of newly acquired spacers, which is observed to be uneven, are poorly unde
297 on one receptor but having different peptide spacer with Avitag sequence necessary for their immobili
298 equence analysis of the internal transcribed spacer with or without D1/D2 ribosomal RNA regions.
299 or (D-A-D) systems based on a pyrimidine pai-spacer with various substituents at the C-2 position has