ライフサイエンスコーパス: sperm whale

1 thesis for this low diversity, especially in sperm whales.

2 n some whale societies, including killer and sperm whales.

3 n coproliths found in about one in a hundred sperm whales.

4 e obtained 99.4% accuracy using two Dominica sperm whales.

5 For example, sperm whales, a species that remains for long periods at

6 gned to classify spectrograms generated from sperm whale acoustic data according to the presence or a

7 identified for blue, fin, humpback, grey and sperm whale acoustic signals.

8 salt dependence of histidine pK(a) values in sperm whale and horse myoglobin and in histidine-contain

9 eight species of delphinids, pygmy and dwarf sperm whales, and harbor porpoises, but not in beluga or

10 s and of canyons and seamounts to beaked and sperm whales, and quantified seasonal shifts in the dens

11 s were developed for Cuvier's beaked whales, sperm whales, and Risso's dolphins in the oceanic Gulf o

12 an all-alpha-helical single domain protein, Sperm whale apomyoglobin (apoMb).

13 propensity of the completely helical protein sperm whale apomyoglobin (sw ApoMb) for amyloid formatio

14 rapidly than its eukaryotic analogues (e.g., sperm whale apomyoglobin and soybean apoleghemoglobin),

15 s, and kinetics of heat-induced unfolding of sperm whale apomyoglobin core formation have been studie

16 The overall affinity of sperm whale apomyoglobin for hemin is approximately 1 x

17 ormation on isotopically labeled recombinant sperm whale apomyoglobin in the native state at pH 6.1.

18 The F helix region of sperm whale apomyoglobin is disordered, undergoing confo

19 in the acid-induced unfolding of recombinant sperm whale apomyoglobin.

20 ues corresponding to the C-terminal helix of sperm whale apomyoglobin.

21 stabilities approaching that of recombinant sperm whale apomyoglobin.

22 ies of the folding and unfolding kinetics of sperm whale apomyoglobin.

23 Sperm whales are an ideal species to study using passive

24 The social relationships of sperm whales are organized in a multilevel society with

25 obins from diving mammals, particularly from sperm whales, are the most stable, whereas the apoprotei

26 emonstrate the feasibility of applying ML to sperm whale bioacoustics and establish the validity of c

27 -rebinding behavior of single crystal native sperm whale carbonmonoxy myoglobin (swMbCO) (space group

28 Infrared spectra of heme-bound CO in sperm whale carbonmonoxy myoglobin and two mutants (H64L

29 erties of the three taxonomic A substates of sperm whale carbonmonoxy myoglobin in 75% glycerol/buffe

30 around the alpha-gamma axis of the heme, of sperm-whale carbonmonoxy myoglobin in water.

31 ated vibrational echo data were obtained for sperm whale carbonmonoxymyoglobin (MbCO) at 300 K.

32 the effects of heme rotational isomerism in sperm-whale carbonmonoxymyoglobin using computational te

33 To determine if it does, we selected sperm whale cementum to provide large anisotropic substr

34 tator, insights into the characterization of sperm whale communication are presented.

35 ephalus) monitoring is the identification of sperm whale communication signals, known as codas.

36 r identity, almost everything else about the sperm whale communication system, including its structur

37 methods, and large-scale redistributions of sperm whale cultural clans in the Pacific have likely ch

38 NepsilonH is found to be similar to that in sperm whale cyanomet myoglobin.

39 fts for the heme methyls of low-spin, ferric sperm whale cyanometmyoglobin reconstituted with a varie

40 Slices of sperm whale dentin were mechanically polished and surfac

41 cket mutations at the E7 position (His64) of sperm whale deoxymyoglobin (deoxyMb) are used as a probe

42 f 10 different distal heme pocket mutants of sperm whale deoxymyoglobin (deoxyMb) has been investigat

43 the zinc-containing diamagnetic analogue of sperm whale deoxymyoglobin has been measured as a functi

44 terception of predator vocalizations by male sperm whales disrupted functional behaviours and mediate

45 Sperm whales exhibited multiple foraging strategies, wit

46 X) in single cysteine-containing variants of sperm whale ferric aquomyoglobin.

47 At each station, sperm whale foraging activity varied by month.

48 rstand the spatial and temporal variation of sperm whale foraging activity.

49 Sixteen sperm whales from calves to large adults showed a size-r

50 to real-world datasets that contain multiple sperm whales from two ocean basins.

51 data are reported for the cavity mutants of sperm whale H93G myoglobin and human H25A heme oxygenase

52 ance excreted by the intestinal tract of the sperm whale, has been a highly prized fragrance ingredie

53 The occurrence and distribution of sperm whales in New Zealand waters is mainly known from

54 nce and study the dive behaviour of foraging sperm whales in the western North Atlantic Ocean.

55 diversification of odontocetes, particularly sperm whales, in the Miocene (~18-10 Mya) propels a fina

56 ransmission seems key in the partitioning of sperm whales into sympatric clans.

57 ups at the 2- and 4-positions of the heme in sperm whale Mb and HRP, and examine the structural and b

58 Introduction of a nonaxial His into sperm whale Mb at the topologically equivalent position

59 HNE became covalently bound to sperm whale Mb at up to five sites based on ESI-MS analy

60 the oxidation and binding rate constants for sperm whale Mb were increased when His(E7) was replaced

61 In contrast to sperm whale Mb, where the orientation of the magnetic ax

62 perature, although more plastic than that of sperm whale Mb.

63 GuHCl-induced, equilibrium unfolding of five sperm whale metMb variants, which were selected to exami

64 A series of proximal side mutants of sperm whale metmyoglobin (metMb) that involves residues

65 Reaction of sperm whale metmyoglobin (SwMb) with H2O2 produces a fer

66 In the sperm whale metmyoglobin Tyr103Phe mutant, there is no d

67 hydrogen peroxide with human methemoglobin, sperm whale metmyoglobin, and horse heart metmyoglobin w

68 findings provide quantitative evidence that sperm whale movements are socially coordinated and predi

69 udies on an engineered heme-copper center in sperm whale myoglobin (Leu-29 --> HisPhe-43 --> His, cal

70 Sperm whale myoglobin (Mb) in the ferric state has a per

71 ethyl, propyl, and butyl isocyanide bound to sperm whale myoglobin (Mb) reveal two major conformation

72 n this study, we report a full conversion of sperm whale myoglobin (Mb) to an ultrareduced state thro

73 N HMQC spectra were collected on 15N-labeled sperm whale myoglobin (Mb) to determine the tautomeric s

74 nd approximately 2125 cm(-1) upon binding to sperm whale myoglobin (Mb).

75 , 106-116/E(d), and of a dominant epitope of sperm whale myoglobin (SWM), 102-118/A(d), is entirely d

76 ndent reaction of lactoperoxidase (LPO) with sperm whale myoglobin (SwMb) or horse myoglobin (HoMb) p

77 > Phe and Trp --> Phe mutants of recombinant sperm whale myoglobin (SwMb) were investigated.

78 ected mice in response to a non-parasite Ag, sperm whale myoglobin (SwMb).

79 ndent Bacillus subtilis myoglobin (BsMb) and sperm whale myoglobin (SwMb).

80 cell populations demonstrated that a diverse sperm whale myoglobin 110-121-reactive CD4(+) T cell rep

81 Hybridoma 74a.e9 was specific for the sperm whale myoglobin 67-79 peptide and could be partial

82 Equivalent mutations in sperm whale myoglobin alter ligand affinity by only 5-fo

83 ies of 20 different distal pocket mutants of sperm whale myoglobin and found to be governed by the ea

84 this work, molecular dynamics simulations of sperm whale myoglobin and mutations at positions 68 (E11

85 eractions in the distal pockets of wild-type sperm whale myoglobin and soybean leghemoglobin.

86 protein G, for the lambda repressor and for sperm whale myoglobin are presented.

87 pectra were measured in the visible bands of sperm whale myoglobin as a function of distal pocket mut

88 iron-containing enzymes, was engineered into sperm whale myoglobin by replacing Leu29 and Phe43 with

89 Engineered variants of sperm whale myoglobin catalyze this synthetically valuab

90 o soybean Lba, whereas the same mutations in sperm whale myoglobin cause 50 to 100-fold decreases in

91 ce, previously observed in the isoelectronic sperm whale myoglobin complex.

92 d pH 7, soybean Lba is much less stable than sperm whale myoglobin due both to a fourfold higher rate

93 On the whole, the results for the sperm whale myoglobin E7 substitutions show that the rat

94 Sperm whale myoglobin forms a hydroperoxide on Tyr-151 i

95 ciated carbon monoxide in the heme pocket of sperm whale myoglobin has been studied using equilibrium

96 Fe(B) site within the heme distal pocket of sperm whale myoglobin has offered well-defined diiron cl

97 A circular permutein of sperm whale myoglobin in which the G helix is C-terminal

98 An engineered variant of sperm whale myoglobin is shown to enable the highly dias

99 engineered heme-copper center in myoglobin (sperm whale myoglobin L29H/F43H, called Cu(B)Mb).

100 on tryptophan through the use of recombinant sperm whale myoglobin labeled with 13C at the indole rin

101 can be exchanged into the proximal cavity of sperm whale myoglobin mutant H93G, providing a simple me

102 In the sperm whale myoglobin mutant H93G, the proximal histidin

103 o three independent amber nonsense codons in sperm whale myoglobin or green fluorescent protein.

104 water molecule in the distal heme pocket of sperm whale myoglobin over the pH range 4.3-9.4.

105 the deoxy, oxy, and aquomet forms of native sperm whale myoglobin reconstituted with cobalt protopor

106 Engineering these three residues into sperm whale myoglobin results in a triple mutant with ap

107 lopment of biological catalysts derived from sperm whale myoglobin that exploit a carbene transfer me

108 bin, we determined the crystal structures of sperm whale myoglobin to 2.0 A or better in different st

109 ion of carbon monoxide in the heme pocket of sperm whale myoglobin was studied by using molecular dyn

110 asts with H-D amide exchange measurements on sperm whale myoglobin which indicated low protection for

111 seen when asparagine68 is inserted into H64L sperm whale myoglobin which lacks a distal histidine.

112 The computations are performed both in sperm whale myoglobin wild-type and in sperm whale V68F

113 ansfer via a tyrosine residue (tyrosine 103, sperm whale myoglobin).

114 L heme domain, elephant myoglobin, wild-type sperm whale myoglobin, and sperm whale myoglobins having

115 (B6 X A)F1 mice were immunized with sperm whale myoglobin, and T cell clones and hybridomas

116 electrochemical midpoints (E(m)s) at pH 7 in sperm whale myoglobin, Aplysia myoblogin, hemoglobin I,

117 histidines not interacting with the heme in sperm whale myoglobin, it was found that seven (His-12,

118 As a minimum model for CcO, a mutant of sperm whale myoglobin, named Cu(B)Mb, has been engineere

119 To measure these interactions in sperm whale myoglobin, single mutations were made to dis

120 ggests that the radical resides on Tyr151 in sperm whale myoglobin, Tyr133 in soybean leghemoglobin,

121 In a simulation of sperm whale myoglobin, we found 294 such high-density re

122 secretion of gamma-interferon (IFN-gamma) by sperm whale myoglobin-specific Th1 cells of DBA/2 mouse

123 t of the CO derivative of several mutants of sperm whale myoglobin.

124 onstants, respectively, compared to those of sperm whale myoglobin.

125 of wild-type Lba were compared with those of sperm whale myoglobin.

126 exit onto the three-dimensional structure of sperm whale myoglobin.

127 utamates (Glu) and three histidines (His) in sperm whale myoglobin.

128 wild-type DHP and has comparable activity to sperm whale myoglobin.

129 dynamics of the heme pocket of a recombinant sperm whale myoglobin.

130 ees C, approximately 35 times faster than in sperm whale myoglobin.

131 pathways for ligand movement into and out of sperm whale myoglobin.

132 - and off-rates are also similar to those of sperm whale myoglobin.

133 scaris hemoglobin is very similar to that in sperm whale myoglobin.

134 r to that of leghemoglobin a than to that of sperm whale myoglobin.

135 n the oxygen dissociation rate compared with sperm whale myoglobin.

136 ve the 3-dimensional structure of a protein, sperm-whale myoglobin, worthy of a Nobel Prize in Chemis

137 dation of a variety of different recombinant sperm whale myoglobins (Mb) and human hemoglobins (Hb).

138 globin, wild-type sperm whale myoglobin, and sperm whale myoglobins having alanine, valine, threonine

139 The properties of wild-type, V68T, and H97D sperm whale myoglobins were compared to determine the re

140 ement of coordinated water from H64 and H64Q sperm whale myoglobins, where the E7 side chain hydrogen

141 ated the foraging activity and occurrence of sperm whales off the Eastern coast of New Zealand using

142 e to subsurface dynamic variables, while for sperm whales only surface and deep-water variables were

143 Distal pocket mutants of sperm whale oxymyoglobin (oxy-Mb) were reacted with a 2.

144 ditive Models to predict the distribution of sperm whales Physeter macrocephalus and beaked whales Zi

145 sessed the levels and inter-annual trends of sperm whale (Physeter macrocephalus) and/or killer whale

146 ning (ML) techniques to advance the study of sperm whale (Physeter macrocephalus) bioacoustics.

147 A key technology for sperm whale (Physeter macrocephalus) monitoring is the i

148 Pacific blue whales (Balaenoptera musculus), sperm whale (Physeter macrocephalus), dusky dolphin (Lag

149 particles accumulated in the liver tissue of sperm whale (Physeter macrocephalus).

150 Sperm whales (Physeter macrocephalus) are highly social

151 or behaviour of five typically-solitary male sperm whales (Physeter macrocephalus) in the Norwegian S

152 Sperm whales (Physeter macrocephalus) navigate complex o

153 es to dive away from the perceived predator, sperm whales responded to killer whale playbacks by inte

154 ghts into the spatial and social dynamics of sperm whale societies and highlighting the role of socia

155 The great whales (baleen and sperm whales), through their massive size and wide distr

156 dwarf (Kogia sima) and pygmy (K. breviceps) sperm whales to examine the effects of phylogeny and lif

157 th in sperm whale myoglobin wild-type and in sperm whale V68F myoglobin mutant, which is experimental

158 Sperm whale vocalisations are more expressive and struct

159 pygmy (Kogia breviceps) and dwarf (K. sima) sperm whales were used to characterize the gut microbiom