ライフサイエンスコーパス: stitch

1 ne patient had a small abscess at a surgical stitch.

2 herapy due to poor apposition of mucosa with stitches.

3 e wound was less likely to bleed and to need stitching.

4 nsformations of images when performing image stitching.

5 and compresses the proteome through epitope-stitching.

6 eous analysis and discovery due to incorrect stitching.

7 Diverse parallel stitched 2D heterostructures, including metal-semiconduc

8 an computationally intensive process such as stitching 3D digital pathology datasets using BigStitche

9 AutoStitcher reconstructs ("stitches") a PWMHS from a set of 4 fragments by optimizi

10 tive keratitis (n = 1), rosacea (n = 1), and stitch abscess (n = 1).

11 Possible causes of the abscesses include "stitch abscess" or reaction to the suture material used

12 s included hernia recurrence in one case and stitch abscesses in two cases.

13 MIST produced higher stitching accuracy than three open-source tools.

14 ted 15 reference datasets to quantify MIST's stitching accuracy.

15 ze of 1150 colonies are measured to quantify stitching accuracy.

16 SIM-stitching achieved an rms mass error of 0.18 ppm and det

17 omosis began with the placement of the first stitch and ended when the last stitch was cut.

18 STITCH and STRING are sister databases that catalog know

19 with protein and drug interactions from the STITCH and STRING interaction databases.

20 a the Phenotiki sensor interface, collected, stitched and analysed.

21 me assembly software pipeline ASAP (Assembly Stitching and Alignment Pipeline) that is scalable to da

22 h single-cell accuracy requires robust image stitching and image registration capabilities that are n

23 that synergistically promotes the palladium stitching and provides the bicyclic products.

24 ing of ASHLAR, a Python tool for coordinated stitching and registration of 103 or more individual mul

25 SIM-stitching and wide-scan range (WSR; Thermo Electron) wer

26 neration; an automated pipeline for 3D image stitching; and an automated pipeline for neuron morpholo

27 ng method outperforms the traditional direct stitching approach in AFM topographical image stitching

28 d by variations in image contrast and mosaic-stitching artifact.

29 nterpolAI repairs tissue damages and reduces stitching artifacts.

30 We demonstrate that Stitch assembles a comprehensive overview of the antibod

31 However, achieving precise image stitching at the single-molecule level remains a challen

32 ipeline includes a complete set of tools for stitching, automated quality control, 3D section alignme

33 hunks are imaged separately and then 'volume stitched' back together, producing a final three-dimensi

34 llected from microscope need to be optimally stitched before accurate physical information can be ext

35 sible for disrupting the charge transfer and stitching bilayer at high pH, providing a plausible expl

36 We demonstrate the use of Stitch by fully reconstructing two monoclonal antibody s

37 tive manufacturing technique that allows for stitch-by-stitch programming of elastic properties and h

38 Specifically, SANTO stitches cross-platform slices for breast cancer samples

39 to stitched ToF-SIMS data sets, whereby the stitched data are used to train the same model to provid

40 514 chemicals and 9457 human proteins in the STITCH database.

41 These threads can be used to stitch decorative designs onto various consumer fabrics

42 SIM-stitching decreased the maximum mass error by 1.3- and 4

43 hallenges in throughput, proximity error and stitching defects on the path to scaling.

44 file formats, performing required filtering, stitching different tools together etc. can be prohibiti

45 ed by inaccurate segmentations along the non-stitching dimensions, the lack of high-quality diverse 3

46 These defects, created by stitching displaced domains of a Kekule-patterned metasu

47 ents then placed intracorporeal laparoscopic stitches during a Nissen fundoplication on a patient.

48 anion from nitromethane as a 1C-connector to stitch easily and appropriately crafted pyridyl ynones t

49 ted pairwise translations and then minimizes stitching errors by optimizing the translations within a

50 Stitched fluorescence microscope images inevitably exist

51 Here we describe a method (STITCH) for imputation based only on sequencing read dat

52 Graphene films consisting entirely of well-stitched grain boundaries can retain ultrahigh strength,

53 show excellent spatial homogeneity and well-stitched grain boundaries, enabling facile transfer to v

54 ure and advanced software for seamless image stitching, have made the scanning process more efficient

55 e reconstruct three-dimensional objects from stitched high-resolution images and extract quantitative

56 Without the steps of stitching image columns, pivoting the light-sheet and se

57 rom individual video frames, by sequentially stitching image frames based on matching surface feature

58 existing stitching tools either struggle to stitch images together when the microscopy images are fe

59 MIST generated stitched images with an average centroid distance error

60 ructural fragment-based threading algorithm, STITCH, implemented in two variants depending on expecte

61 , specimen photobleaching, segmentation, and stitching inaccuracies.

62 ery diverse fields that enables the user to 'stitch' individual pieces of DNA together.

63 mation, patch-wise manual annotation, or raw stitched information in the correction process.

64 8 resected HCT116(luc) tumors (2-5 mm) were stitched into 1 freshly resected human colon specimen an

65 a wide mass segments across a 1000 Da range, stitched into a single composite mass spectrum, and comp

66 t the algorithm was capable of capturing and stitching intravesical images with different sweeping pa

67 ted fabrics made only of the two traditional stitches, knit and purl.

68 brane under control conditions to a diffuse, stitch-like pattern after rVE-cad CPD transfection.

69 that surpass the conventional alignment and stitching limits and potentially expand their applicatio

70 n-Crick hybridization and strand exchange to stitch linear duplexes into finite assemblies.2-4 The di

71 ynes and tetraynes could be polymerized in a stitching manner to give polymers that are inaccessible

72 designed to automate 3D segmentation include stitching masks along one dimension, training a 3D neura

73 ests that polycrystalline graphene with good stitching may allow for uniformly high electrical perfor

74 Our analytical technique-named spectral stitching-measures data as several overlapping mass-to-c

75 opose a bi-channel aided feature-based image stitching method and demonstrate its use on Atomic Force

76 This first involved reoptimizing the SIM-stitching method for the LTQ FT Ultra, which achieved a

77 ected to enable routine use of this spectral stitching method for ultracomplex samples, giving a more

78 and show that the proposed bi-channel aided stitching method outperforms the traditional direct stit

79 he zinc-finger structural domain, our finger stitching method uses units that span the finger-finger

80 The final SIM-stitching method, derived from several optimization expe

81 However, existing alignment and stitching methods are unpractical to process large-scale

82 ultiplicative linear correction and seamless stitching methods tended to score more highly on the sub

83 The method outperforms existing image-based stitching methods, achieving subpixel accuracy (83 +/- 3

84 utilize stripe-free patches sampled from the stitched microscope image itself to correct their adjace

85 Stitching microscope images into a mosaic is an essentia

86 The attempt to stitch molecules covalently in an orthogonal fashion to

87 However, the current methods for stitching multiple small molds to fabricate large-area m

88 Homozygous stitch-mutant mice have severe hearing loss at the age o

89 ino acid substitutions in baringo, nice, and stitch mutants, respectively.

90 ls in the basal region of baringo, nice, and stitch mutants.

91 ed most marked for three subcategories: skin stitches, nose/throat operations, and removal of growths

92 s in MXenes with metal scissors and then the stitching of 2D carbide nanosheets with atom intercalati

93 there is a drop in intensity, hampering the stitching of consecutive windows.

94 In contrast, the stitching of horse alpha-(1-30) with mouse alpha-(31-141

95 Image Stitching Tool) for rapid and accurate stitching of large 2D time-lapse mosaics.

96 Inspired by the space-time duality and by stitching of multiple microscopic images to achieve a la

97 ASAP has been deployed for continuous stitching of several large-scale datasets of the mouse v

98 of spatial omics technologies, alignment and stitching of slices becomes indispensable to decipher a

99 itational assembly of the scaffold to ensure stitching of the scaffold.

100 cuts of the flat-mount outline; dividing the stitched outline into a mesh whose vertices then are map

101 Relative to a broadband spectrum, the stitched output showed an over 2-fold increase in assign

102 than the microscope's field of view (FOV) by stitching overlapping image tiles.

103 We developed an algorithm called Rhapso to stitch peak lists corresponding to multiple different m/

104 ing, peak annotation distribution, clustered/stitched peaks (e.g. super-enhancer) identification, and

105 confocal microscopy assays demonstrate that stitched peptides display superior cell penetrating abil

106 ed to investigate the conformation of these "stitched" peptides, which are shown to exhibit remarkabl

107 he credibility of estimated translations and stitching performance.

108 Relative to a stitching performed manually, Rhapso increased the data

109 ng image acquisition, which combined with 3D stitching permits the contiguous analysis of large tissu

110 The SuPPoRT "Stitch, Pessary, or Progesterone Randomised Trial" was d

111 oom motor approach, we have developed an HSI stitching pipeline that enables freehand line scanning.

112 of the hydrogels and is triggered to form a stitching polymer network in situ, in topological entang

113 The two hydrogels detach easily when the stitching polymer network is so functionalized that it u

114 Herein we developed a rhodium-catalyzed stitching polymerization of nonconjugated and readily pr

115 ould be accessed by protodesilylation of the stitched polymers.

116 length preservation, periurethral suspension stitch, posterior reconstruction, combined anterior and

117 This, along with an imaging stitching procedure, enables the capturing of a field of

118 uffix arrays followed by seed clustering and stitching procedure.

119 It has been proposed that such a stitching process happens in offline neural reactivation

120 rcation, indicating that OLTs counteract the stitching process.

121 acturing technique that allows for stitch-by-stitch programming of elastic properties and has applica

122 Large area objects can be fabricated by stitching projected images over a 5 cm(2) area.

123 mplementary DNAs in situ with a one-step DNA stitching reaction to create pooled, spatially indexed s

124 of oligobutadiene that were involved in this stitching reaction was achieved by self-assembly of the

125 dic or nonperiodic patterns with a minimized stitched region, thereby allowing for the large-area and

126 cells, a process that we named StitchR (for Stitch RNA).

127 evitably produces a clear alignment mark and stitched seam. In this study, we propose a mark-less ali

128 ical section followed by 3D alignment of the stitched sections.

129 Stitch-seq is applicable to various interaction assays a

130 ively parallel interactome-mapping pipeline, Stitch-seq, that combines PCR stitching with next-genera

131 ive cross-coupling, a two-fold bidirectional stitching sequence comprised of an oxime-directed beta-C

132 tion, linear discriminant analysis, seamless stitching, simple averaging, and simple interpolating.

133 merges as a robust and accurate solution for stitching single-molecule resolution images in tissue-sc

134 maps, and use a Gaussian weighting kernel to stitch smaller images back into larger fields of view.

135 ed versions of A2-17, stapled (StpA2-17) and stitched (StchA2-17), whose alpha-helical conformations

136 titching approach in AFM topographical image stitching task.

137 e augmentation strategy for microscopy image stitching tasks and will benefit the experimentalist to

138 oarse-to-fine method targeting alignment and stitching tasks for spatial omics.

139 To overcome this limitation, image stitching techniques have been developed to seamlessly m

140 Peak stitch tension (T(MAX)) under all conditions was observe

141 t rate or inotropic state did not alter peak stitch tension whereas enhanced contractile state decrea

142 Hemodynamic data, stitch tension, and 3-D marker coordinates were obtained

143 iameter is the chief determinant of "Alfieri stitch" tension, but hemodynamic parameters may also pla

144 meters are the main determinants of "Alfieri stitch" tension.

145 al assembly methods or a new strategy-finger stitching-that increases the diversity of genomic sequen

146 Mannich-type reaction of a cyclic nitrone to stitch the C4 and C13 together, and a cyclocondensation

147 two-fold symmetric H-bond and a salt bridge stitch the double-rings together, whereas only the H-bon

148 toughness by creating molecular bridges that stitch the interface together.

149 g solvent situated in the "molecular pocket" stitches the gelators through weak H-bonding interaction

150 This is achieved by: stitching the marked-up cuts of the flat-mount outline;

151 recting uneven illumination artifacts, (iii) stitching the mosaic planes into a single, large 2D imag

152 TMDs to form vertical heterojunctions or by stitching them laterally to form lateral heterojunctions

153 We show that stitching these solutions together leads to the analytic

154 Stitching these together, we reconstruct three ancestral

155 d and acts as a universal "molecular thread" stitching through multiple shell protein interfaces.

156 ichoic acids are anionic glycopolymers cross-stitched to a thick layer of peptidoglycan.

157 When mouse alpha-(1-30) is stitched to horse alpha-(31-141), the product is a chime

158 In this transformation, the dihaloarene is stitched to the gem-dimethyl moiety via two sequential b

159 The high throughput of ssEM necessitates 2D stitching to be done at the pace of imaging, which curre

160 , single-frame imaging, and the use of image stitching to build composite chemical maps.

161 oscopy, rapid automated data collection, and stitching to create large virtual slides.

162 rate pragmatically the usefulness of modular stitching to reveal internal chain dynamics of single mo

163 we present a fast and simple software tool (Stitch) to map proteomic short reads to user-defined tem

164 Here, we apply SOM-RPM to stitched ToF-SIMS data sets, whereby the stitched data a

165 alytic protocol that uses mild conditions to stitch together inexpensive alcohols and aryl chlorides,

166 cyclization sequence uses diazo compounds to stitch together linear 1,m-haloamines (m=2-5) to rapidly

167 tomated mosaic software programs are used to stitch together overlapping retinal fundus photographs.

168 rain boundary and find that different grains stitch together predominantly through pentagon-heptagon

169 o compensate instrument noise and seamlessly stitch together subsections of the force profile signifi

170 alides with olefins, has been widely used to stitch together the carbogenic cores of numerous complex

171 atalyst and an inexpensive thiol catalyst to stitch together two olefins, forming a new C-C bond.

172 tion approaches provide an elegant method to stitch together unprotected peptides, the handling and p

173 ics between the two cortical hemispheres can stitch together WM traces across visual hemifields.

174 ied droplet (several mm(2)), micrographs are stitched together (several tens), and all nanoparticles

175 In mammalian cells, these cisternae are stitched together as a perinuclear Golgi ribbon, which i

176 new methods by which functionalities may be stitched together become available.

177 kable, tryptophan-dominated, dimer interface stitched together by a complex salt-bridge network.

178 These two components were finally stitched together by an esterification to afford the tar

179 ted tilt and mirror twin boundaries that are stitched together by lines of 8- and 4-membered rings.

180 ar hydrocarbon phosphate building blocks are stitched together by means of 'prenyl coupling', followe

181 of randomly-oriented diamond and cBN domains stitched together by sp(3)-hybridized C-B and C-N bonds,

182 e composed of 2-D and 3-D fragments that are stitched together into a global 3-D metric representatio

183 to make sense of these events, they must be stitched together into an overarching narrative-a model

184 All six luciferase reporter units are stitched together into one plasmid facilitating delivery

185 Photographic data were stitched together to create 360 degrees panoramic images

186 ution of each section, and these can then be stitched together to span the sectioned volume.

187 lected ion monitoring (SIM) windows that are stitched together using novel algorithms.

188 regions of the genome are shattered and then stitched together via a single devastating event, referr

189 domains, components are often globular units stitched together with flexible linkers.

190 led from pyrogallol[4]arene units, which are stitched together with indium ions.

191 mains of graphene and h-BN can be seamlessly stitched together, hybrid atomic layers with interesting

192 f are removed, and the rest of the genome is stitched together.

193 ographic microscopy (FPM), which iteratively stitches together a number of variably illuminated, low-

194 It stitches together these aligned regions (often exons) in

195 es in exploring chemoselective reactions for stitching together lipid fragments to form membrane-form

196 uence had to be established by painstakingly stitching together pieces of sequence information, and v

197 plays a critical role in these processes by stitching together spatiotemporally disparate entities a

198 By intramolecularly stitching together the side chains of lysine and tryptop

199 Stitching together trans-omics data is a powerful approa

200 s core building blocks and is highlighted by stitching together two similarly complex halves via a ke

201 amolecular assemblies that are subsequently "stitched" together, generating the p-tert-butylcalix[n]a

202 sional observation was enabled by digitally "stitching" together contiguous SEM images.

203 Waddington-OT, a computational approach to 'stitch' together developmental time points.

204 -charge (m/z) windows that are subsequently 'stitched' together, creating a complete mass spectrum.

205 We created MIST (Microscopy Image Stitching Tool) for rapid and accurate stitching of larg

206 However, the existing stitching tools either struggle to stitch images togethe

207 e morphological details of the sample, and a stitched topographical image is desired for researchers.

208 untangle the relationship between changes in stitch topology and emergent elasticity in several types

209 fabrics is an emergent property of the local stitch topology and pattern that cannot solely be attrib

210 ing these mechanical properties based on the stitch type remains elusive.

211 that undergo an osteoblast-dependent fusion/stitching until the branchpoint, and that bifurcation is

212 This role is further evidenced when stitching-up the capsule seam, resulting in either expul

213 "Stitching-up" the capsule seam with a tertiary metal (Zn

214 The STITCH v5.0 pipeline was primarily used for identifying

215 of the first stitch and ended when the last stitch was cut.

216 Nylon stitches were used to fixate the fibrin membrane to the

217 l sections; cutting, shivering/crusting, and stitching were the principal contributors of heavy metal

218 ping pipeline, Stitch-seq, that combines PCR stitching with next-generation sequencing and used it to

219 f three new mouse models, baringo, nice, and stitch, with recessively inherited sensorineural deafnes

220 targeted lesions in vivo, demonstrating that stitching yields ZFAs with robust recognition properties