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1 ly within the IFT70 tetratricopeptide repeat superhelix.
2 the core histones in a left-handed, negative superhelix.
3 sheets that wrap around each other to form a superhelix.
4 th a flexible region and part of a rigid RNA superhelix.
5 cleosomes that organize DNA in a left-handed superhelix.
6 d within a chamber created from the Cut9 TPR superhelix.
7  loops rather than along the DNA plectonemic superhelix.
8 ve a high-resolution model of the nucleosome superhelix.
9 le multimerizes in the form of a left-handed superhelix.
10 ity of spring-like behaviour of the putative superhelix.
11 e to a smooth, ideal conformation of the DNA superhelix.
12 e nucleosomal DNA from opposite sides of the superhelix.
13 NA, wrapping around DNA to form a continuous superhelix.
14 oligonucleotide into a continuous nicked DNA superhelix.
15 cessible residue on the back side of the TPR superhelix.
16 l slithering of opposite segments of the DNA superhelix.
17 nd stack head-to-head to form a right-handed superhelix.
18 t promoters are stress points within the DNA superhelix.
19 main consists of eight helices arranged in a superhelix.
20 n opposing segments of DNA in the interwound superhelix.
21 en them, and the branching of the interwound superhelix.
22 ral model of a fourfold stranded enantiopure superhelix.
23 he side perpendicular to the axis of the DNA superhelix and contacts two disparate sites on the nucle
24 ightly packed in the capsid as a left-handed superhelix and held in place by the interactions with po
25  the entry-exit sites of the nucleosomal DNA superhelix and its acetylation state in yeast is a marke
26  focus attention only on the geometry of the superhelix and present two distinct mathematical express
27 rised about 132 bp DNA wound in a continuous superhelix around histone octamers.
28 r groove at the entry-exit points of the DNA superhelix as it wraps around the nucleosome.
29         Wrapping results in a hole along the superhelix axis, providing insight into how Abeta may fo
30 ion decreases, s/s(oc) increases because the superhelix becomes less regular and more compact.
31                  We found that the number of superhelix branches increases linearly with the length o
32 ollisions between sites located on different superhelix branches-although increasing in importance wi
33 ns showed that s is a strong function of the superhelix branching frequency.
34 " into the hydrophobic core destabilizes the superhelix by 1.4 kcal mol(-1).
35 d circular DNA, and models of the nucleosome superhelix, chromatin, thermal motion and nucleosome unw
36                    We found no indication of superhelix collapse in any ionic conditions even remotel
37                    We found no indication of superhelix collapse under any ionic conditions studied.
38 es of B for all the ionic conditions and DNA superhelix densities studied; the discrepancy was less t
39 e nearly the same at both relaxed and native superhelix densities.
40 concentration (> or approximately 0.1 M) and superhelix density (> or approximately-0.05) cause circu
41  difference from deltal = 0 to -26 turns, or superhelix density from sigma = 0 to -0.062.
42 destabilization to single-base resolution at superhelix density sigma = -0.06.
43  measured by FPA is practically invariant to superhelix density, and the plateau diffusion coefficien
44 erformed for different values of the plasmid superhelix density, from 0 to -0.07.
45 sed chromosomal sites do not show an altered superhelix density.
46  melting within the plasmid as a function of superhelix density: the CUP1 initiation element is intri
47  contacts, but instead exhibit most probable superhelix diameters of 85 to 90 A.
48 ng to develop a new model they termed double superhelix (DSH) apoA-I that is dramatically different f
49 rom fluctuations around branch points in the superhelix failed to match the data: they yielded non-ex
50 ead, transient distortions of the interwound superhelix, followed by continuous reshaping of the mole
51  extent, Cu2+ and Mn2+, were found to induce superhelix formation of the ICP8-ssDNA filament and to f
52      One representation requires torsion for superhelix formation; the other requires shear.
53 ectively crosslinks the two gyres of the DNA superhelix, improves positioning of the DNA on the histo
54 main covers only a restricted area above the superhelix in LHCII, which is consistent with the "Velcr
55  which are arranged into a rod in Efr3 and a superhelix in Ypp1.
56                                          The superhelix is characterised by a large curvature (597 de
57 ase, suggesting that the rigidity of the RNA superhelix is necessary for efficient motor assembly and
58 ering of opposing segments of the interwound superhelix is not an efficient mechanism to accomplish s
59  that comprises the spool onto which the DNA superhelix is wrapped and an N-terminal "tail" domain in
60 r to allow integration at strongly preferred superhelix location +/-3.5 positions.
61 ns if within one and a half helical turns of superhelix location 2 (SHL2), where the Chd1 ATPase enga
62 racts preferentially with nucleosomal DNA at superhelix location 2 on the nucleosome face distal to i
63 r positioning a target sequence at different superhelix locations (SHLs) across a nucleosome in which
64                                         This superhelix may be relevant to the function of the BAH do
65  and the new computational model, the double superhelix model, suggest an unexpected structural arran
66  showing that Cdc16/Cut9 is a contiguous TPR superhelix of 14 TPR units.
67                                    We find a superhelix of 25 twisted leucine-rich repeats (LRRs), an
68  chiral crossings imposed by the left-handed superhelix of a (+) supercoiled DNA, rather than global
69                        The 12 repeats form a superhelix of helices that features a long, positively c
70 madillo repeats, organized in a right-handed superhelix of helices.
71 DNA wrap around each other in a right-handed superhelix of high pitch, so the upstream and downstream
72 this unwinding is to change the pitch of the superhelix of the tandem repeats from which the bend ang
73   The VHS domain is comprised of an unusual "superhelix" of eight alpha helices, and the FYVE domain
74 ection, with a loss of axial register of the superhelix on both sides.
75 ilizes a spreading mechanism to create a DNA superhelix onto which ParB assembles.
76 othelin fragment has a compact, right-handed superhelix structure consisting of five short helices an
77  located at the entry-exit points of the DNA superhelix surrounding the nucleosome, where it may cont
78 repeats pack together to form a right-handed superhelix that approximates a half doughnut.
79 both types of fibers fold into a left-handed superhelix that can be stabilized by positive torsion.
80  side of the junction is part of a large RNA superhelix that spans the motor.
81 ctively crossbraces the two gyres of the DNA superhelix, thereby stabilizing the nucleosome against d
82 a condition that is likely to render the DNA superhelix tightly compacted.
83 1 and 22 folds back into the interior of the superhelix to create a surface pocket for binding the pl
84  This domain extends the path of the protein superhelix to one side of the core particle.
85 idue in the ligand-binding groove of the TPR superhelix whereas another mutation, PCF1-1, changes a s
86 erruption packs near the central axis of the superhelix, while the hydrophobic residue of a G1G inter
87 lical repeats are organized into an L-shaped superhelix with an amphipathic N-terminal helix dangling
88 al histone homodimers, in a quasi-continuous superhelix with the same geometry as DNA in the eukaryot
89 pids of nascent HDL, an anti-parallel double superhelix wrapped around an ellipsoidal lipid phase.
90 epeats self-associate to form a right-handed superhelix wrapped around the DNA major groove.
91 mplex in which the DNA adopts a right-handed superhelix wrapping around a multimeric p6 scaffold, res