ライフサイエンスコーパス: taxonomically

1 en-order sharing differed geographically and taxonomically.

2 d metabolites, many of which are distributed taxonomically.

3 Rhizomucor variabilis appear to be misplaced taxonomically.

4 f most difficult soil animals to distinguish taxonomically.

5 How widespread are these genes taxonomically?

6 The strain So13.3 was taxonomically affiliated as Streptomyces fildesensis.

7 lasses and show that the U-shaped pattern is taxonomically and biogeographically universal in modern

8 report the comparative genome analysis of 29 taxonomically and biotechnologically important yeasts, i

9 Species were identified taxonomically and classified into functional categories

10 munities are highly diverse functionally and taxonomically and co-occur with complex mixtures of orga

11 Here, we show that taxonomically and ecologically diverse heterotrophic bac

12 that viruses with high host plasticity (i.e. taxonomically and ecologically diverse host range) were

13 perform sequencing and hybrid assembly of 45 taxonomically and ecologically diverse termites and two

14 This pattern persisted within taxonomically and ecologically homogenous groups, indica

15 ave tested these ideas using geographically, taxonomically and ecologically restricted samples, yield

16 s of Southeast Asia remain poorly known both taxonomically and ecologically, and the hotspot of diver

17 The isolation of rhodopsin from taxonomically and ecotypically diverse dinoflagellates a

18 , but in general their fossil record is both taxonomically and environmentally limited.

19 ound that enhanced field edges harbored more taxonomically and functionally abundant, diverse, and co

20 group of microorganisms can be characterized taxonomically and functionally by gene probing and seque

21 that bacterioplankton communities were both taxonomically and functionally different between backwat

22 bionts from the two colony morphologies were taxonomically and functionally distinct in the North Atl

23 Dormancy manifests differently across taxonomically and functionally distinct microbial groups

24 eria that utilize organic carbon sources-are taxonomically and functionally diverse across environmen

25 The study indicates that the taxonomically and functionally diverse rare biosphere ha

26 Mutualistic interactions are taxonomically and functionally diverse.

27 fish assemblages in desert rivers may become taxonomically and functionally impoverished and dominate

28 and vegetation composition (classified both taxonomically and functionally).

29 Soil communities are diverse taxonomically and functionally.

30 A taxonomically and geographically diverse group of common

31 Foliar sodium varied taxonomically and geographically, spanning five orders o

32 The magnitude of this effect varies taxonomically and is strongest for rodent, bat and passe

33 arbon degradation pathways were expressed by taxonomically and metabolically contrasted lineages incl

34 rimental approaches to study the function of taxonomically and metabolically diverse microbiomes are

35 We demonstrate that SLiMEs support taxonomically and metabolically diverse microorganisms,

36 ge volumes of genomic and enzymatic data for taxonomically and phenotypically diverse organisms allow

37 cranium to A. anamensis on the basis of the taxonomically and phylogenetically informative morpholog

38 Among them, the Chloroflexi comprises taxonomically and physiologically diverse lineages adapt

39 rdingly, future studies that make use of the taxonomically and spatially integrative approach employe

40 alien fish Leuciscus idus were tested on two taxonomically and trophically similar native fishes, Squ

41 The gene catalog is functionally and taxonomically annotated.

42 opulation lineages that are to be recognized taxonomically as species, but they cause conflicts among

43 metagenomics sequencing on extracted DNA and taxonomically assigned shotgun sequences using a human m

44 Most (54%) of the patient-enriched, taxonomically assigned species are of buccal origin, sug

45 The phylotypes were taxonomically assigned to 29 genera of 19 families in 9

46 We highlight MAGs that were taxonomically assigned to groups previously underreprese

47 s that use coarse measures of dimorphism and taxonomically-biased sampling.

48 We combine geographically and taxonomically broad data on local biodiversity with quan

49 respiratory illness that were tested for 11 taxonomically broad groups of respiratory viruses over 9

50 FUGOID is a web-based, taxonomically broad organelle intron database that colle

51 paper presents the first geographically and taxonomically broad quantification of the latitudinal gr

52 lly, analysis of phosphorylation data from a taxonomically broad set of 48 eukaryotic species indicat

53 is the lack of standardized, long-term, and taxonomically broad time series.

54 nt, targeted PCR-based methodologies and (2) taxonomically broad, non-culture dependent PCR-based met

55 increasingly quantitative, experimental, and taxonomically broad.

56 medical importance have long been classified taxonomically by morphological characteristics.

57 Metatranscriptomic reads were classified taxonomically (by genomic binning) and functionally (usi

58 will be helpful to identify members of this taxonomically challenging group in further investigation

59 & Davies is the largest and perhaps the most taxonomically challenging species complex of black flies

60 nomes and proteomes from all currently known taxonomically classified and unclassified, cultivated an

61 fy led to a large expansion in the number of taxonomically classified human gut viral sequences and t

62 Reads from Illumina MiSeq sequencing were taxonomically classified using Kraken.

63 bes can be recovered, shotgun sequenced, and taxonomically classified, including down to the species

64 decades, the 16S rRNA gene has been used to taxonomically classify prokaryotic species and to taxono

65 enoising methods are a mainstream stopgap to taxonomically classifying large numbers of 16S rRNA gene

66 be able to identify the pathogen among both taxonomically close species of the same genus and taxono

67 eliable transfer of gene regulations between taxonomically closely related organisms that incorporate

68 s clear multidimensional structure, which is taxonomically coherent and broadly predictable from spec

69 esolved these novel taxa as monophyletic and taxonomically coherent.

70 ure changed significantly over time; however taxonomically, communities in the south and north diverg

71 The genus Lactobacillus is a taxonomically complex and is composed of over 170 specie

72 based approach to identify and classify this taxonomically complex group of opportunistic pathogens.

73 The genus Euphrasia in Britain comprises a taxonomically complex group of self-compatible, morpholo

74 however, collectors typically avoided large, taxonomically complex groups, causing their underreprese

75 he P. serratifolia complex which is the most taxonomically complicated species with the most extensiv

76 ervation planning by providing spatially and taxonomically comprehensive data on biodiversity and eco

77 es in the phylogenetic neighborhood are: (1) taxonomically consistent and (2) share sufficient pairwi

78 microbiome by positively correlating with a taxonomically consistent group of bacteria.

79 ber of museum specimens attributed to it are taxonomically contentious.

80 Here, taxonomically controlled latitudinal variations in shell

81 genomes--with enrichment analysis against a taxonomically defined background.

82 Consequently, the taxonomically defined Fungi represents a genomically non

83 eby extending the concept of the core beyond taxonomically defined membership to community function a

84 be designated complexes until they are more taxonomically defined.

85 Empirical data usually concern taxonomically delineated groups, such as classes or orde

86 The assemblage is taxonomically depauperate but includes fossils of recogn

87 t status is recorded, a species must be both taxonomically described and then formally assessed; lowe

88 study the biochar formation process in three taxonomically different plant biomass, under oxygen-limi

89 ser to each other than communities that were taxonomically different.

90 s is lacking, in part because Ligustrum is a taxonomically difficult genus.

91 chand (Burseraceae), long considered to be a taxonomically difficult species complex.

92 ructural and electronic origin exist between taxonomically discrete clades, revealed by distinct spec

93 in mechanism of action between SVP genes of taxonomically distant Arabidopsis and a woody perennial

94 E2D evokes approach responses in two taxonomically distant blood-seeking predators, Stable fl

95 guanine was found broadly distributed across taxonomically distant groups of microalgae from diverse

96 from a wheat-infecting fungal pathogen in a taxonomically distant nonhost plant species presumably b

97 Occasionally, taxonomically distant organisms share the same defense c

98 s GVs, confirm that LBCs can be derived from taxonomically distant organisms.

99 in mechanism of action between SVP genes of taxonomically distant plant species.

100 at orthologous relationships with genes from taxonomically distant species can be established for the

101 omically close species of the same genus and taxonomically distant species of different genera, using

102 e in a predator-prey predicted manner across taxonomically distant species, as well as the first know

103 able of distinguishing saponin profiles from taxonomically distant species, it can unravel plant adul

104 that similar detection strategies evolved in taxonomically distant species.

105 divide Ediacaran macrofossil localities into taxonomically distinct clusters, which may represent evo

106 A taxonomically distinct commensal species (Streptococcus

107 Here we identify three taxonomically distinct families of human gut bacteria (B

108 that the producer of the anti-cancer drug is taxonomically distinct from other sequenced microorganis

109 Despite the taxonomically distinct groups of symbionts, commonalitie

110 additional jasplakinolide analogues from two taxonomically distinct marine sponges including two Aule

111 mbstones from the same cemeteries harbouring taxonomically distinct microbial communities.

112 Altogether, these findings uncover a taxonomically distinct microbial community potentially a

113 active as a model species: it represents the taxonomically distinct monocots and is a crop species.

114 lead biologists to designate two microbes as taxonomically distinct need not necessarily imply differ

115 tigate the inherent structural complexity of taxonomically distinct reefs, across five ecologically r

116 ommon marine phytoplankton are being used by taxonomically distinct sets of heterotrophic populations

117 ing outer structures in phylogenetically and taxonomically distinct spore-forming species.

118 genes are also induced by infection with the taxonomically distinct tobacco rattle virus (TRV) in C.

119 benthamiana inhibits systemic spread of two taxonomically distinct viruses, Tobacco mosaic virus and

120 romycotina and Stramenopile sequences formed taxonomically-distinct clades.

121 When we analysed NIS interacting with taxonomically distinctive native taxa, we found that con

122 nd the evolutionary adaptability to multiple taxonomically divergent hosts.

123 Allobaculum inversely associates with the taxonomically divergent immunostimulatory species Akkerm

124 These microbial communities can be taxonomically diverse and dynamic, and their persistence

125 le is known about the cranial anatomy of the taxonomically diverse and geographically widespread tita

126 the cohort, but bgsB-encoding bacteria were taxonomically diverse and showed dynamic changes with ho

127 at the faster-X effect is pervasive across a taxonomically diverse array of evolutionary lineages.

128 ne family were therefore investigated from a taxonomically diverse array of prokaryotic and eukaryoti

129 The remaining species are a taxonomically diverse assemblage showing a significant,

130 MddA functions in many taxonomically diverse bacteria including sediment-dwelli

131 NA triggered anaerobic PCE dechlorination in taxonomically diverse bacterial populations.

132 are found in hundreds of phages that infect taxonomically diverse bacterial species.

133 rp1 antibodies neutralizes RVFV infection in taxonomically diverse cell lines.

134 The Florideophyceae is the most abundant and taxonomically diverse class of red algae (Rhodophyta).

135 7 antimicrobials in 3,144 isolates from four taxonomically diverse clonal and recombining bacteria: M

136 red direct-smear and extraction methods on a taxonomically diverse collection of isolates.

137 ch to train and refine a neural network on a taxonomically diverse collection of microscopic images.

138 These phylogenetically and taxonomically diverse communities were more strongly and

139 alogous OCP families, each distributed among taxonomically diverse cyanobacterial genomes.

140 correlated within and among species, because taxonomically diverse diets are likely to include plants

141 Moreover, many taxonomically diverse eukaryotic cells divide by furrowi

142 drolase family (GH) 16 comprises a large and taxonomically diverse family of glycosidases and transgl

143 Here we identify a taxonomically diverse group of >100 marine and terrestri

144 a five-gene plastid data set to show that a taxonomically diverse group of chlorophyll c(2)-containi

145 (3) A taxonomically diverse group of fungal endophytes can inf

146 arine life cycles among a geographically and taxonomically diverse group of marine fish and invertebr

147 Picoeukaryotes are a taxonomically diverse group of organisms less than 2 mic

148 causing viral hemorrhagic fever (VHF) are a taxonomically diverse group of viruses that may share co

149 Assessment of 19 taxonomically diverse gut isolates revealed that the gro

150 cDNA sequences from seven taxonomically diverse hornwort rbcL sequences combined w

151 antibody (ACAb) responses against a panel of taxonomically diverse intestinal bacteria species in ser

152 With the general exception of bacteria, taxonomically diverse marine and freshwater organisms ha

153 Here, we address this problem by tracking 10 taxonomically diverse microbial communities from the pit

154 n intensively studied in the larger and more taxonomically diverse Neognathae clade (particularly cro

155 serum antibodies to West Nile virus (WNV) in taxonomically diverse North American avian species.

156 izobiales is typically the most abundant and taxonomically diverse order in lichen microbiomes; howev

157 The growth of bioinformatics data from taxonomically diverse organisms has made it possible to

158 graphic system-for the in-depth study of 100 taxonomically diverse organisms.

159 Ecologically differentiated clades became taxonomically diverse over time because they were better

160 ed data from vertical echosounder surveys of taxonomically diverse pelagic stocks from geographically

161 groups have adapted to these widespread and taxonomically diverse plants, yet their interactions wit

162 phosphates extracted from the leaves of five taxonomically diverse plants.

163 ing tissue extracts prepared from a group of taxonomically diverse plants.

164 cross thousands of species, we discovered 79 taxonomically diverse putative colonization factors orga

165 genome-scale metabolic models representing a taxonomically diverse set of bacteria.

166 de a strong test of bet hedging for a large, taxonomically diverse set of seed heteromorphic species,

167 However, taxonomically diverse skull models in the literature oft

168 rom these two organisms, as well as 16 other taxonomically diverse species of Bacillus and Clostridiu

169 f how selection acts on key floral traits in taxonomically diverse species, and that further work in

170 population genomic data from a wide range of taxonomically diverse species.

171 e reference and representative genome set, a taxonomically diverse subset of RefSeq prokaryotic genom

172 or nearly a century and are widespread among taxonomically diverse viruses, but little information is

173 n the present study, genome sequences of 118 taxonomically diverse, mainly Gram-positive, bacterial s

174 Yet, bacteria are vastly more taxonomically diverse, numerically abundant, and globall

175 Among animals, invertebrates are taxonomically diverse, responsive to temperature changes

176 These parasites are taxonomically diverse, with human pathogenic species sep

177 Invertebrate pathogens and their hosts are taxonomically diverse.

178 Using a newly assembled and taxonomically expansive database, we analyzed the relati

179 wledge gap by compiling a geographically and taxonomically extensive database on plant heat and cold

180 Such taxonomically fine-grained diet partitioning suggests th

181 cological adaptation plays a fundamental and taxonomically general role in promoting reproductive iso

182 id proteomes vary temporally, spatially, and taxonomically has been historically difficult to analyze

183 standing of the ecology and evolution of the taxonomically hyperdiverse microbial communities is limi

184 ated from ticks decades ago but had not been taxonomically identified are novel TBPVs.

185 as not yet been recovered in culture or even taxonomically identified.

186 Fourteen known disease vectors were taxonomically identified.

187 luding ecologically abundant phyla, and help taxonomically identify 7-38% of 'unknown' sequence space

188 The ability to taxonomically identify community members at the species

189 impacts are likely to be geographically and taxonomically idiosyncratic and difficult to predict.

190 This taxonomically ill-defined Serratia sp. produces a carbap

191 adequate, especially when reference sets are taxonomically imbalanced, as are most microbial librarie

192 en to match the electron capture energies of taxonomically important compounds such as dipicolinic ac

193 l Reference and the Silva 119 databases were taxonomically inconsistent, mostly due to differing 18S

194 adapted strains that are phenotypically and taxonomically indistinguishable from typical E. coli (co

195 The number of taxonomically informative amino acid changes in the larg

196 ecal samples that we confirmed by sequencing taxonomically informative genetic markers.

197 The uBioRSS application is a 'taxonomically intelligent' service customized for the bi

198 DNA tools have revealed many new species in taxonomically intractable groups, but unbiased studies o

199 To place these ascosporogenous strains taxonomically, it is proposed that they be assigned to t

200 y fast when implemented in molecules, but is taxonomically less powerful than a Turing machine.

201 SFP identification however remains taxonomically limited and little is known about avian SF

202 se soil microbial communities but assemble a taxonomically limited root-associated microbiome.

203 a single donor can be clonally archived and taxonomically mapped in multiwell format to create perso

204 Taxonomically, metabolically and functionally distinct b

205 We found more than two million potentially taxonomically misclassified proteins in the NR database.

206 ion of 97% and a recall of 87% for detecting taxonomically misclassified proteins.

207 ion on population complexity and to identify taxonomically mixed isolates.

208 tionally modern communities precedes that of taxonomically modern communities by 100,000s of years, a

209 ets (corbiculae) of the same bee taxa from a taxonomically much narrower suite of arborescent, evergr

210 y of host divergence a largely conserved and taxonomically narrow root microbiota, which comprises st

211 ir soft parts has hitherto been limited to a taxonomically narrow sample of small- to dolphin-sized a

212 widespread occurrence, spatially as well as taxonomically, of hypericinoid pigments in various order

213 fundamental problem in modern genomics is to taxonomically or functionally classify DNA sequence frag

214 Taxonomically, pathobiomes are variable across host spec

215 gene in isolates of Staphylococcus sciuri, a taxonomically primitive staphylococcal species recovered

216 enetic variation and apply the workflow to a taxonomically problematic group of frogs (the Rana pipie

217 Amplicon sequencing, a common strategy to taxonomically profile microbial communities, is relative

218 omically classify prokaryotic species and to taxonomically profile microbial communities.

219 Since the two bird species studied are taxonomically quite distinct, this would indicate that t

220 exposing TIR functionalized surfaces to four taxonomically related and/or distantly related bacterial

221 Genomic analyses of taxonomically related Bordetella and Achromobacter speci

222 re accurately characterizes anaerobes within taxonomically related clusters and thereby may enable be

223 Ocean) were shown to harbor highly similar, taxonomically related communities of denitrifiers whose

224 bisporus is substantially different from the taxonomically related ectomycorrhizal symbiont Laccaria

225 t from the terpineol synthases (TERs) of the taxonomically related N. alata and N. langsdorfii (both

226 000 species' responses for 54 assemblages of taxonomically related species occurring together in spac

227 disclose differences in gene content between taxonomically related strains that vary with respect to

228 cellular oyster parasite, Perkinsus marinus, taxonomically related to both dinoflagellates and apicom

229 This atlas captures taxonomically-related trends in biomass composition, and

230 We submit that only irreversible and taxonomically relevant events are at the molecular basis

231 We created a taxonomically representative dataset of dinoflagellate t

232 targeting seven 'core' genes was employed to taxonomically resolve Synechococcus isolates and correla

233 nalysis does not support the hypothesis that taxonomically restricted (orphan) genes play an oversize

234 parative genomic studies of diet that employ taxonomically restricted analyses or simplified diet cla

235 lation of models based on geographically and taxonomically restricted data may underestimate the true

236 zschnell (bls), that consists of de novo and taxonomically restricted genes that control cell prolife

237 features include genomic rearrangements and taxonomically restricted genes that may be functionally

238 for at most a third of eukaryotic orphan and taxonomically restricted genes.

239 particular taxonomic ranks are classified as taxonomically restricted ORFans.

240 All genomes encode taxonomically restricted orphan genes, and the vast majo

241 parative genomics, and the identification of taxonomically restricted sequences.

242 stinctive microbial community, composed of a taxonomically restricted set of species specific to soci

243 ydrophobic clustering was found in previous, taxonomically restricted studies.

244 kingdom, and most specialized diterpenes are taxonomically restricted to a few plant species, genera,

245 obally distributed in the world's oceans and taxonomically restricted to a handful of bacterial gener

246 ve energy coupled to methane production, was taxonomically restricted to a metabolically specialized

247 TaFROG is taxonomically restricted to the grass subfamily Pooideae

248 n: past analyses are either over 25 y old or taxonomically restricted.

249 Finally, we taxonomically resurrect a species from extinction, Gould

250 Although the innovations arose in taxonomically rich biotas, only 9% are associated with s

251 ed the sequences of four of the most broadly taxonomically sampled proteins available to create a rou

252 Taxonomically, SARS-CoV-2 was shown to be a Betacoronavi

253 Bacterial communities were taxonomically sensitive in the inundated areas and funct

254 anism, Kocuria rhizophila, from which it was taxonomically separated relatively recently.

255 ting of species that are morphologically and taxonomically similar and may therefore be likely to eng

256 Animal architects are widespread taxonomically, spanning invertebrates (Figure 1) and ver

257 nal transmission of microbes advances from a taxonomically specialized phenomenon to a universal one

258 Because they are broadly distributed taxonomically, species specific, and stable to genetic m

259 , but production of the known cyanotoxins is taxonomically sporadic.

260 The taxonomically spotty presence of this 'sarpin' domain an

261 Healthy plants host diverse but taxonomically structured communities of microorganisms,

262 Among spiders, taxonomically the most diversified group of terrestrial

263 And yet, its classic purview is restricted taxonomically to the subset of organisms with heteromorp

264 otrichum spp. are economically important but taxonomically un-resolved.

265 l genomes of DNA viruses, 96.7% of which are taxonomically unassigned.

266 970 species-level genome bins, 4,992 of them taxonomically unidentified at the species level.

267 A taxonomically unique bacterial strain, Acinetobacter sp.

268 more, large-bodied, broadly distributed, and taxonomically unique species receive more scientific and

269 tribution in nature is rare and scattered in taxonomically unrelated plants.

270 dy additional latrunculin analogues from two taxonomically unrelated sponges, Cacospongia mycofijiens

271 ilable data are, however, geographically and taxonomically unrepresentative; most data are from North

272 s, and their ticks, efforts to classify them taxonomically using conventional serological and electro

273 the late Pliocene was associated with major, taxonomically variable, shifts in Caribbean biotic compo

274 us, it provides one of the clearest and most taxonomically varied views of Proterozoic life yet repor

275 Here we collate taxonomically verified checklists to present a list of s

276 wn about Amazonian plant diversity, but this taxonomically verified dataset provides a valid starting

277 r study shows that incorporating large-scale taxonomically verified distribution datasets and mega-ph

278 Applying a taxonomically verified novel genomic dataset of Malpighi

279 (2017) Amazon plant diversity revealed by a taxonomically verified species list.

280 Species not included in the taxonomically-vetted checklist but verified by taxonomis

281 only 6,727 tree species belong to the first taxonomically-vetted checklist published for the region

282 This taxonomically widespread adaptation helps plants avoid t

283 ining ejaculate performance with male age is taxonomically widespread and has broad fitness consequen

284 Plasticity in the decision to disperse is taxonomically widespread and I provide examples for inse

285 in migration - an ecologically important and taxonomically widespread behavior---to gain insight into

286 Seasonal migration is a taxonomically widespread behaviour that integrates acros

287 where parents eat their own offspring, is a taxonomically widespread behaviour with a multitude of p

288 Iridescence is a striking and taxonomically widespread form of animal coloration [1],

289 Conspecific sperm precedence (CSP) is a taxonomically widespread form of reproductive isolation,

290 However, the most taxonomically widespread form of self-incompatibility, t

291 Chicken repeat 1 (CR1) is a taxonomically widespread non-LTR retrotransposon.

292 e, providing an adaptive explanation for its taxonomically widespread occurrence.

293 erature-size rule" (TSR), is one of the most taxonomically widespread patterns in biology.

294 ions and genomic collections representing 10 taxonomically widespread species.

295 esting that episodic-like memory may be more taxonomically widespread than previously assumed.

296 While lateralized mating behaviors are taxonomically widespread, among mammals they are only kn

297 Tool use, though rare, is taxonomically widespread, but morphological adaptations

298 Although social learning capabilities are taxonomically widespread, demonstrating that freely inte

299 Despite being taxonomically widespread, these routing behaviours remai

300 the superkingdom and phylum of DNA sequences taxonomically without the need for a known representativ