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1 ic number of ATPs is consumed in degrading a ubiquitinated protein.
2 mpairment and an accumulation of nondegraded ubiquitinated protein.
3 ion, KO of ubqln also caused accumulation of ubiquitinated proteins.
4 ability to bind, deubiquitinate, and degrade ubiquitinated proteins.
5 ed p62-independent autophagic degradation of ubiquitinated proteins.
6 autophagic substrates such as p62, LC3II and ubiquitinated proteins.
7 me is a large protease complex that degrades ubiquitinated proteins.
8 n family, which regulates the degradation of ubiquitinated proteins.
9 ased Bax by 140% (P<0.05) and also increased ubiquitinated proteins.
10 tions can affect proteasome interaction with ubiquitinated proteins.
11 perone proteins, proteasomal components, and ubiquitinated proteins.
12 100 nM) and causes accumulation of cellular ubiquitinated proteins.
13 nhibitor AUY922 promoted the accumulation of ubiquitinated proteins.
14 ning paralleled by accumulation of insoluble ubiquitinated proteins.
15 ivity upon interacting with ubiquitin and/or ubiquitinated proteins.
16 criteria necessary for the interpretation of ubiquitinated proteins.
17 damage sites in part through recognition of ubiquitinated proteins.
18 ivity, but significant affinity for cellular ubiquitinated proteins.
19 hat WRNIP1 plays a role in the metabolism of ubiquitinated proteins.
20 stability, function, and/or localization of ubiquitinated proteins.
21 nd occurrence of inclusion bodies containing ubiquitinated proteins.
22 disease, exhibit inclusion bodies containing ubiquitinated proteins.
23 a marked decrease in association of VCP with ubiquitinated proteins.
24 th dynein and induces marked accumulation of ubiquitinated proteins.
25 -mediated degradation and an accumulation of ubiquitinated proteins.
26 lexes that selectively degrade intracellular ubiquitinated proteins.
27 ding of RHBDL4 to p97/VCP and Lys(63)-linked ubiquitinated proteins.
28 ysis and enhance proteasomal specificity for ubiquitinated proteins.
29 basal ATP consumption and degradation of non-ubiquitinated proteins.
30 led to exert protection or blunt the rise in ubiquitinated proteins.
31 ransport (ESCRT) [10-12], small GTPases, and ubiquitinated proteins.
32 target oligomers assembled from N-terminally ubiquitinated proteins.
33 of high molecular weight TDP-43 species and ubiquitinated proteins.
34 , accompanied by an increase of oxidized and ubiquitinated proteins.
35 western blotting quantities of endogenously ubiquitinated proteins.
36 mployed unanchored ubiquitin chains and mono-ubiquitinated proteins.
37 ondrial impairment led to down-regulation of ubiquitinated-proteins, 26S proteasome disassembly, and
38 fication and quantification of more than 400 ubiquitinated proteins, a fraction of which were found t
42 n Clcc1-deficient granule cells in vivo, and ubiquitinated proteins accumulate in these neurons befor
43 the nervous system, pathologic aggregates of ubiquitinated proteins accumulate only in specific neuro
45 including potentially toxic aggregate-prone ubiquitinated proteins, accumulate in Pompe myofibers an
46 that they exhibit reduced ability to degrade ubiquitinated proteins, accumulate short-lived GFPu, and
49 over, the overexpression of PARK2 diminished ubiquitinated proteins accumulation, improves its target
50 A proteomics strategy was used to identify ubiquitinated proteins after preconditioning ischemia.
53 uction in AlaRS editing efficacy resulted in ubiquitinated protein aggregates and mitochondrial defec
54 autophagy defects including accumulation of ubiquitinated protein aggregates and p62/SQSTM1, deficie
55 n and proteolytic sequestration of insoluble ubiquitinated protein aggregates associated with p62 and
56 eriments revealed accumulations of insoluble ubiquitinated protein aggregates associated with the ada
57 teasome, reduces both the size and number of ubiquitinated protein aggregates in aged flies, and incr
58 t pressure overload promotes accumulation of ubiquitinated protein aggregates in the left ventricle,
59 sis in cerebellum as well as accumulation of ubiquitinated protein aggregates without any deficiency
60 changes, including gliosis, accumulation of ubiquitinated protein aggregates, lipofuscinosis, and en
62 -weight alpha-synuclein, and the presence of ubiquitinated protein aggregates, recapitulating many of
63 R stress sensitivity and the accumulation of ubiquitinated protein aggregates, whose efficient degrad
66 ssion level is closely linked to the rate of ubiquitinated protein aggregation, which are themselves
68 efoldin increased the level of SDS-insoluble ubiquitinated protein and reduced cell viability in lact
77 ved from L110R MM-1alpha mice, the levels of ubiquitinated proteins and cytotoxicity were higher in L
78 ration was accompanied by an accumulation of ubiquitinated proteins and decreased xeroderma pigmentos
79 resistant parasites exhibit lower levels of ubiquitinated proteins and delayed onset of cell death,
81 receptor hRpn13, triggering accumulation of ubiquitinated proteins and endoplasmic reticulum stress-
82 correlate with an increased accumulation of ubiquitinated proteins and expression of CIN85/RukL in p
83 Our data suggest that recruitment of both ubiquitinated proteins and LC3-II by p62 directs ubiquit
84 es the selectivity of the 26S proteasome for ubiquitinated proteins and links their deubiquitination
85 ssue proteasome activity and accumulation of ubiquitinated proteins and natural proteasome substrates
86 ormal accumulations of amyloid-beta peptide, ubiquitinated proteins and other autophagic substrates w
88 f desmin filaments caused an accumulation of ubiquitinated proteins and rapid destruction of myofibri
89 easomal deubiquitinating enzyme that cleaves ubiquitinated proteins and releases ubiquitin chains.
90 tion was associated with the accumulation of ubiquitinated proteins and reversible opacification of t
91 nd SW480 cell lines leads to accumulation of ubiquitinated proteins and several proteasome target pro
92 which resulted in ER stress, accumulation of ubiquitinated proteins and subsequent ER dilation, contr
93 hows that IBMPFD mutant expression increases ubiquitinated proteins and susceptibility to proteasome
94 d histone deacetylase 6 recognize aggregated ubiquitinated proteins and target them for autophagy in
97 ytic activity of the 20S proteasome, because ubiquitinated proteins and the peptidase activities of 2
98 ccumulated abnormally, and co-localized with ubiquitinated proteins and the prelysosomal markers HRS
99 ncer cells, resulting in the accumulation of ubiquitinated proteins and the proteasome target protein
100 overexpression determines an accumulation of ubiquitinated proteins and this event requires the N-ter
101 sitive) cells results in the accumulation of ubiquitinated proteins and three natural proteasome subs
102 and in vivo by WA results in accumulation of ubiquitinated proteins and three proteasome target prote
103 c stress conditions allows cells to react to ubiquitinated proteins and to assemble nuclear, liquid c
104 R23B, were found to bind specifically to K48-ubiquitinated proteins and to stimulate proteasome bindi
105 n-binding domains, thereby bringing together ubiquitinated proteins and ubiquitin receptors to execut
108 DsRed marker protein, (2) a higher level of ubiquitinated proteins, and (3) coordinated induced expr
109 ance of glycoconjugates, alpha-synuclein and ubiquitinated proteins, and abrogation of inflammatory r
111 e main non-lysosomal degradative pathway for ubiquitinated proteins, and autophagy, a lysosome-mediat
112 ia increased their connectivity, accumulated ubiquitinated proteins, and decreased their respiration.
113 gulation of iron metabolism, accumulation of ubiquitinated proteins, and incorporation of elements of
114 (DUBs) proteolytically cleave ubiquitin from ubiquitinated proteins, and inhibition of DUBs that resc
116 of cullins and noncullin proteins, increased ubiquitinated proteins, and stabilized a surrogate subst
117 ulated reactive oxygen species (ROS) damage, ubiquitinated proteins, and the multi-functional adapter
118 oteins, including amyloid-beta (Abeta), tau, ubiquitinated-proteins, apolipoprotein E, and alpha-synu
122 udies have shown that unfolded and misfolded ubiquitinated proteins are degraded not only by proteaso
124 Intrasarcoplasmic amyloidosis and increased ubiquitinated proteins are observed in human failing hea
127 otein (GFAP), small heat shock proteins, and ubiquitinated proteins are termed Rosenthal fibers and c
130 activity, which preceded the accumulation of ubiquitinated proteins as detergent/salt-insoluble aggre
131 s, a scaffold protein that co-localizes with ubiquitinated protein at the 30 days post irradiation ti
136 proteasome activities and cellular levels of ubiquitinated proteins by activating protein kinase G (P
137 disorders associated with the aggregation of ubiquitinated proteins by impairing 26 S proteasome acti
138 the FIP200 CTR slows the phase separation of ubiquitinated proteins by p62 in a reconstituted system.
139 compared the turnover dynamics of endogenous ubiquitinated proteins by proteasomes and autophagy by a
142 deubiquitination and allows for selection of ubiquitinated proteins capable of being unfolded and eff
144 normal storage of carbohydrates, lipids, and ubiquitinated proteins, combined with marked accumulatio
146 ion is accompanied by a decrease of the poly-ubiquitinated protein content and co-immunoprecipitates
147 HDAC6 mutants, we show that HDAC6 binding to ubiquitinated proteins controls the duration of HSF1 act
148 revealed that this protein is essential for ubiquitinated protein degradation and for parasite survi
150 tinated proteins in the knock-out cells, but ubiquitinated protein degradation was decreased during s
151 ome, a cylindrical organelle that recognizes ubiquitinated proteins, degrades the proteins, and recyc
153 rison with normal tissues by accumulation of ubiquitinated proteins despite elevated proteasome level
155 ing in accumulation of oxidative lesions and ubiquitinated proteins during heat stress in CWD clams.
156 Usp14 are much more active in degrading non-ubiquitinated proteins (e.g. Sic1) than WT particles.
157 on-gamma: (1) that immunoproteasomes degrade ubiquitinated proteins faster than the constitutive prot
158 tein catabolism could induce accumulation of ubiquitinated proteins followed by significant cell stre
159 nizing the Lys--Gly-Gly (diGly) remnant from ubiquitinated proteins following trypsinolysis have prov
164 entify 374 diglycine-modified lysines on 236 ubiquitinated proteins from HEK293 cells, including 80 p
170 tion of the proteasome's capacity to degrade ubiquitinated proteins has received little attention, al
172 wn role in mediating the degradation of poly-ubiquitinated proteins, HDAC6 selectively interacted wit
174 f TUNEL staining and lack of accumulation of ubiquitinated protein in vacuoles of motor and sensory n
175 ation scheme for the isolation of a specific ubiquitinated protein in which affinity moieties are fus
180 evalence of receptors such as agglutinin and ubiquitinated proteins in ciliary ectosomes suggests tha
181 ce and promoted the degradation of insoluble ubiquitinated proteins in CryAB(R120G) cardiomyocytes bu
183 strate accumulation of P56S VAPB protein and ubiquitinated proteins in cytoplasmic inclusions, select
184 oteasome inhibition and accumulation of poly-ubiquitinated proteins in diffuse large B-cell lymphoma
185 esistant' schizophrenia had higher levels of ubiquitinated proteins in erythrocytes compared to those
186 Furthermore, a proteomics screen comparing ubiquitinated proteins in hearts from Parkin(-/-) and Pa
187 enlargement, and cytoplasmic accumulation of ubiquitinated proteins in HeLa cells and wild-type mouse
188 veloped an approach for the visualization of ubiquitinated proteins in living cells designated ubiqui
189 with this view, NAC abolished an increase in ubiquitinated proteins in MG132-treated astrocytes.
191 utophagy inhibition (96 h) failed to elevate ubiquitinated proteins in rat cortical neurons, although
193 formation of p62/SQTM1 aggregates containing ubiquitinated proteins in structures known as aggresome-
195 ere we show that tau increased the levels of ubiquitinated proteins in the brain and triggered activa
197 ditions there was no effect on the levels of ubiquitinated proteins in the knock-out cells, but ubiqu
198 e and protein level approaches to enrich for ubiquitinated proteins in the presence and absence of HR
199 om HCT116 cells to cause increased levels of ubiquitinated proteins in whole-cell extract and at prot
200 profiling both the entire yeast proteome and ubiquitinated proteins in wild-type and ubiquitin K11R m
201 e observed the corresponding accumulation of ubiquitinated-proteins in NSCLC cell lines and tissues a
202 uitinated proteins and LC3-II by p62 directs ubiquitinated proteins, including I-kappaBalpha, to the
203 abnormal ubiquitination and accumulation of ubiquitinated proteins, including TDP-43 and a SCF(Cycli
204 P-43) accumulation is the major component of ubiquitinated protein inclusions found in patients with
206 in 43 (TDP-43) is the principal component of ubiquitinated protein inclusions present in nervous tiss
207 hibition, the cellular content of K48-linked ubiquitinated proteins increased without any change in p
208 ytes exhibit higher than wild-type levels of ubiquitinated proteins, increased levels of protein oxid
209 rtezomib and SP1017 augments accumulation of ubiquitinated proteins, increases markers of proteotoxic
210 monstrate reduced levels of proteasome-bound ubiquitinated proteins, indicating that the loss of hRpn
211 es growth retardation and an accumulation of ubiquitinated proteins, indicative of a cellular stress
213 t that this early and persistent increase in ubiquitinated proteins induced by IBMPFD mutations in p9
214 penetrates cells, it causes accumulation of ubiquitinated proteins, inhibits human 20S proteasomes,
217 respect to endosomal movement and sorting of ubiquitinated proteins into lysosomes, its function in m
219 or K63-ubiquitin chains determine whether a ubiquitinated protein is targeted for proteasomal degrad
220 ubiquitin, indicating that incorporation of ubiquitinated proteins is a later event in the disease p
223 of trafficking machinery components to bind ubiquitinated proteins is known to have a function in ca
225 Here, using shotgun proteomics, we map the ubiquitinated protein landscape during embryonic stem ce
226 atment with a proteasome inhibitor increases ubiquitinated protein levels and shortens the life span
227 The proteasome inhibitor epoxomicin raised ubiquitinated protein levels at least 3-fold higher than
229 ed production of reactive oxygen species and ubiquitinated protein levels, while the de-ubiquitinatio
235 protein inclusions and high-molecular-weight ubiquitinated proteins, markers of UPS dysfunction.
236 HC class I presentation, they do not degrade ubiquitinated proteins more efficiently than constitutiv
237 ions in Drosophila caused an accumulation of ubiquitinated proteins, neurodegeneration, larval-crawli
239 berrant membrane structures, accumulation of ubiquitinated proteins on membranes, and axon degenerati
241 e we describe UbiCRest, in which substrates (ubiquitinated proteins or polyubiquitin chains) are trea
242 tin to substrates, recognizing or processing ubiquitinated proteins, or constituting or regulating th
243 rected to the LDs via SQSTM1, which bound to ubiquitinated proteins, possibly including perilipin 1,
244 mplex components and have elevated levels of ubiquitinated proteins prior to manifestation of cardiom
245 Ubiquitin remnant profiling of the multi-ubiquitinated proteins proliferating cell nuclear antige
246 V), mutant profilin1 aggregation, abnormally ubiquitinated proteins, reduced choline acetyltransferas
247 inant protein species in the inclusions, and ubiquitinated proteins represent only a minor component;
248 e, suggesting that the increase in levels of ubiquitinated proteins resulting from avicin G treatment
249 s with CB-5083 leads to accumulation of poly-ubiquitinated proteins, retention of endoplasmic reticul
250 nated substrate protein(s) possibly allowing ubiquitinated protein(s) to be degraded by the proteosom
252 control cells and treated with PKA degraded ubiquitinated proteins, small peptides, and ATP more rap
255 ry, including Ub(G76V)-GFP, a representative ubiquitinated protein substrate that is accumulated in t
259 e that is responsible for the degradation of ubiquitinated protein targets in all eukaryotic cells.
262 or expanded ataxin-3 binds a broad range of ubiquitinated proteins that accumulate when the proteaso
264 ss, which is characterized by the buildup of ubiquitinated proteins that cannot be degraded properly.
265 oquine (CQ) led to a massive accumulation of ubiquitinated proteins that correlated with increased ce
266 one resulted in an accumulation of puncta of ubiquitinated proteins that was further enhanced by the
268 he Rad23 family of proteins is known to bind ubiquitinated proteins through its two ubiquitin-associa
269 gnificant efforts have been made to identify ubiquitinated proteins through proteomics studies, but t
270 nactive ataxin-3 (normal or expanded) causes ubiquitinated proteins to accumulate in cells, even in t
274 a new strategy for the chemical synthesis of ubiquitinated proteins to generate a set of well-defined
275 quitin-like domain and is thought to deliver ubiquitinated proteins to proteasomes for degradation.
276 id assay, we analyzed the initial binding of ubiquitinated proteins to purified 26S particles as an i
277 al protein and a signaling hub that shuttles ubiquitinated proteins to the lysosome during autophagy.
278 te ubiquitin recognition and the delivery of ubiquitinated proteins to the proteasome by autoinhibiti
279 a variety of cellular processes by targeting ubiquitinated proteins to the proteasome for degradation
281 e the delivery of hydrophobic and aggregated ubiquitinated proteins to the proteasome for degradation
282 ains, and may participate in the delivery of ubiquitinated proteins to the proteasome through docking
284 ned Hspa1B (heat shock protein 1B hsp70) and ubiquitinated proteins, trapped other cytoskeletal prote
285 tant is altered in interaction with SUG1 and ubiquitinated proteins, triggering constitutive caspase-
286 tic inhibition of autophagy fails to elevate ubiquitinated proteins unless the proteasome is affected
287 th their associated components, also contain ubiquitinated proteins, vimentin, heat-shock protein 72,
290 In wild-type mice, an elevated level of ubiquitinated proteins was observed during muscle reload
291 in both ventilated groups, and the amount of ubiquitinated proteins was significantly and similarly e
292 actories that were regularly associated with ubiquitinated proteins, we conclude that reovirus factor
298 sulted in the dual accumulation of viral and ubiquitinated proteins, which led to enhanced ER stress,
300 reduced PSMD12 levels and an accumulation of ubiquitinated proteins without any impairment of proteas