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1 ne H3 within a 968-bp region 5' of the ABCB1 upstream promoter.
2 a transcriptional fusion between lacZ and an upstream promoter.
3 repeat and transcribed from an unmethylated upstream promoter.
4 ter activity can rescue loss of an essential upstream promoter.
5 depending on the property of the neighboring upstream promoter.
6 ere transcription originates from a separate upstream promoter.
7 epends strongly on the distal segment of its upstream promoter.
8 specific sequence within the distal tRNACAla upstream promoter.
9 roblasts, which transcribe the gene from the upstream promoter.
10 polycistronic pre-snoRNA transcript from an upstream promoter.
11 structs containing different portions of the upstream promoter.
12 arger p18(L) transcript is expressed from an upstream promoter.
13 analogous to a weak core linked to a strong upstream promoter.
14 polycistronic pre-snoRNA transcript from an upstream promoter.
15 ter was not occluded by transcripts from the upstream promoter.
16 s in operons are cotranscribed from a single upstream promoter.
17 er located between -5 and -6 kb in the hiNOS upstream promoter.
18 esting that P4 somehow communicates with the upstream promoters.
19 iation, (iii) readthrough transcription from upstream promoters.
21 romoter (B) is 10 times more active than the upstream promoter (A) in insulin-secreting cells (INS-1)
23 quence was transcribed after formation of an upstream promoter, although such cases were rare compare
24 predict transcriptional coupling between an upstream promoter and a promoter-less reporter gene carr
26 he Core Factor (CF) complex to recognize the upstream promoter and assemble into a Pre-Initiation Com
27 The alphaCTD-sigma(70) interaction spans the upstream promoter and core promoter, thereby linking rec
30 transcription of tco1(+) from an alternate, upstream promoter and inhibits expression of the normoxi
34 f mRNA transcription and p65/RelA binding to upstream promoters and appear to be due to altered forma
35 several kilobase-pair regions containing the upstream, promoter and/or coding regions of 25 genes.
36 is under the control of a previously unknown upstream promoter, and exon 12 are located approximately
37 LTF/ARE), the STAT3 binding site on the MT-I upstream promoter, and the glucocorticoid responsive ele
38 -the golli products, generated from the most upstream promoter, and the MBPs, produced from the two d
39 e prototype AAV2, AAV5 RNAs transcribed from upstream promoters at map units 7 (P7) and 19 (P19), whi
40 ity of the intron is higher than that of the upstream promoter by 12-fold in SK-N-MC cells and by 5.5
41 scription of hREN occurs from an alternative upstream promoter, causing translation to initiate withi
42 cetylation states of histones present on the upstream, promoter, coding or intronic regions of 88 tob
43 ance of D1A transcripts originating from the upstream promoter compared with those transcribed from t
44 ynthesis of 8 nt or 9 nt of RNA, whereas the upstream promoter contacts persists up to synthesis of 1
45 that has been implicated in RNA binding and upstream promoter contacts, support the hypothesis that,
46 t microRNA-302 (miR-302) is controlled by an upstream promoter containing Oct4-Sox2-Nanog-binding sit
47 lyses reveal that miR-21 is controlled by an upstream promoter containing Stat-3 binding site(s), whi
48 yses reveal that miR-10b is controlled by an upstream promoter containing the Twist binding site(s),
49 gion containing two tandem chicken ovalbumin upstream promoter (COUP) sites, which is also the cis-el
51 is achieved through the use of an alternate upstream promoter, designated Pro1, that is active only
52 operative binding of the cI repressor to the upstream promoter DNA did not preclude efficient diffusi
53 ure reveals that RNAP and BmrR recognize the upstream promoter DNA from opposite faces and induce fou
54 initiation RNAP remains associated with the upstream promoter DNA via sequence-specific interactions
55 , we examine effects of removal of alphaCTD, upstream promoter DNA, or both on the rate of open-compl
56 res contact between the Spx/RNAP complex and upstream promoter DNA, which allows Spx-induced engageme
58 ynthesis supported by templates bearing this upstream promoter domain but not by templates lacking it
60 g binding of an Sp1-containing complex to an upstream promoter element (TGFbeta responsive element or
61 DR1 transcription, and they do so through an upstream promoter element (the alternative p63/p73 eleme
62 A regulatory sequence with similarity to an upstream promoter element (UP) was identified upstream o
63 of the two upstream activating elements, the upstream promoter element (UPE) and the inverted CAAT bo
64 nsitive region, between a GAL80-specific far upstream promoter element and the more gene-proximal pro
66 e Elements, and octamer sequences, which are upstream promoter element motifs indicative of Class 3 R
67 vector containing the bb0729-cdr operon and upstream promoter element was used to complement the cdr
70 ds on the integrity of previously identified upstream promoter elements and on the presence of other
71 ription augments recent findings identifying upstream promoter elements and provides further insights
72 IL-4 induced binding of CREB and AP-1 to the upstream promoter elements and resulted in increased CR2
73 00 and CBP in promoting interactions between upstream promoter elements and the basal transcription a
75 studies show that the SUP gene has discrete upstream promoter elements required for expression in st
76 cular and functional studies of the LDH/C 5' upstream promoter elements were undertaken to elucidate
77 pe 2 (HIV-2) gene expression is regulated by upstream promoter elements, including the peri-Ets (pets
80 ispensable for enhanced NER in both the MFA2 upstream promoter, except in the TATA box region, and fo
81 of nuclear orphan receptor chicken ovalbumin upstream promoter-factor II (COUP-TFII, or Nr2f2) persis
85 ent with this hypothesis, apolipoprotein A-1 upstream promoter fragments active in normal and c-Jun e
87 gn with a vector encoding tat but lacking an upstream promoter in a cell line in which drug resistanc
88 decrease in transcriptional activity of the upstream promoter in two D1A-expressing neuroblastoma ce
90 lysis and primer extension indicate that the upstream promoter is 'TATA-less' with multiple transcrip
98 sociated with radiographic response, and the upstream promoter of angiogenesis, hypoxia, determined s
99 epressor that constrains autoimmunity, as an upstream promoter of GATA3 expression that is critical f
101 ly associated domain that also contained the upstream promoter of LINC00632, permitting ectopic conta
102 at transcripts originating from the putative upstream promoter of MDR-1 are in fact aberrant transcri
103 identified a complex between TFIIIB and the upstream promoter of silkworm tRNA Ala genes that is det
108 be generated by alternative splicing from an upstream promoter or by multiple transcriptional start s
113 constructs, we found that Ca2+ inhibited the upstream promoter P1 but activated the downstream promot
115 cleotide polymorphism (SNPs) in an alternate upstream promoter (P2) of HNF4A that were associated wit
116 n expression, whereas transcription from the upstream promoter (P2) was activated only weakly by the
118 r PR1-2 was dependent on the activity of the upstream promoter PR1-1, which activated PR1-2 via trans
120 E1 gene is transcribed by two promoters: the upstream promoter produces erythroid band 3, whereas the
121 romoters control utrophin expression and the upstream promoter (promoter A) is synaptically regulated
122 tional analysis of deletion mutations of the upstream promoter (promoter III) identified an IFN-gamma
124 be initiated from two distinct promoters: an upstream promoter (PU), upstream of exon 1, and a downst
125 was sufficient for weak transcription of the upstream promoter (Pv) by Esigma(A), transcription which
126 st, ca. 50% of the A-AAV RNAs generated from upstream promoters read through (pA)p, as seen for AAV2.
127 show that transcriptional activation at the upstream promoter reduces transcription from the downstr
128 fied a specific double E-box sequence in the upstream promoter region (-2.0 to -2.6 kb) that is respo
130 e indicates that under those conditions, the upstream promoter region acts as a silencer of the downs
131 Mediator coactivators bind first to the far upstream promoter region and subsequently to a promoter
133 stance has been attributed to changes in the upstream promoter region has been cloned and was not suf
135 3' NF-kappaB consensus element in the COX-2 upstream promoter region in human vascular endothelial c
139 ETA2 antisera showed that BETA2 occupies the upstream promoter region of the endogenous betaGK gene i
142 erized the structural organization of the 5' upstream promoter region of the human NET (hNET) gene.
144 ilatory genes, bind to adjacent sites in the upstream promoter region of the nitrate reductase gene,
145 morphic pentanucleotide repeat within the 5' upstream promoter region of the NOS2A gene in samples of
149 B p65 binding to two NF-kappaB motifs in the upstream promoter region of VCAM-1 was blocked by LY2940
150 he two-tandem NF-kappaB binding sites in the upstream promoter region significantly reduced the lucif
151 ysis mapped the alphaCTD binding site to the upstream promoter region that includes the LexA binding
154 4 TA dinucleotide repeat insertion in the 5'-upstream promoter region, a third has a 17-bp deletion n
155 poral control of mga expression requires its upstream promoter region, and the subsequent growth phas
156 nhanced association of FoxO3a with the Bnip3 upstream promoter region, increased levels of Bnip3 tran
157 specific recognition elements located in the upstream promoter region, we examined the activity of tr
163 responsive element (TRE) existing in the 5'-upstream promoter regions (5'-UPR) of the genes respondi
164 and a Cas9 nuclease mutant directed to bind upstream promoter regions can achieve programmable trans
165 we report the structures of the genomic and upstream promoter regions of a mouse and human Mix-like
167 ranscription factor binding site analysis on upstream promoter regions of genes that are enriched in
168 ssor activator protein 1) relocalizes to the upstream promoter regions of hundreds of new target gene
169 sed to identify over-represented TFBS in the upstream promoter regions of ischemia-induced genes comp
170 we report that DNA fragments containing the upstream promoter regions of the porin genes (ompF and o
171 rs for BORIS, and these proteins bind to the upstream promoter regions of two well-characterized proc
173 ind strong enrichment for these sequences in upstream promoter regions, as well as weaker but signifi
178 ated secondary H3 Lys 9 acetylation peaks on upstream promoters (regulated secondary upstream peaks [
179 ll transcription of the distal genes from an upstream promoter required RfaH and the 5' cls-acting op
181 plasmids with various sizes of truncated 5' upstream promoter sequence (UPS) of the alphaI(I) collag
182 e was identified by this analysis within the upstream promoter sequence between the two Sp1 sites pro
183 ows that RNAP-bound Spx contacts a conserved upstream promoter sequence element when bound to RNAP.
186 nal start site of hNEIL1 was mapped, and the upstream promoter sequence was characterized via lucifer
192 gene that affects transcript regulation, the upstream promoter sequences of soybean SMT2 genes were c
193 fection was largely independent of these and upstream promoter sequences, and expression of viral imm
195 thylated guanosine caps at their 5' ends and upstream promoters similar to those of telomerase RNA.
196 occurs when the act of transcription from an upstream promoter suppresses utilization of a co-oriente
197 transcription using RNA transcribed from an upstream promoter, termed read-in RNA transcripts, resul
198 polymerase III (Pol III) and has an external upstream promoter that consists of a TATA sequence recog
199 s (Tcrb) D segments, Dbeta1 is flanked by an upstream promoter that directs its transcription and rec
201 omoter but maintained expression from P1, an upstream promoter that is not contained within the IGF2
203 ays were used to show that chicken ovalbumin upstream promoter transcription factor (COUP-TF) binds s
204 ct with all members of the chicken ovalbumin upstream promoter transcription factor (COUP-TF) subfami
206 that the nuclear receptor, chicken ovalbumin upstream promoter transcription factor (COUP-TF), repres
207 he orphan nuclear receptor chicken ovalbumin upstream promoter transcription factor (COUP-TF)-I inter
209 Previous studies using chicken ovalbumin upstream promoter transcription factor (COUP-TF)-interac
211 g the COL7A1 promoter from chicken ovalbumin upstream promoter transcription factor (COUP-TF)-mediate
213 nuclear hormone receptor [chicken ovalbumin upstream promoter transcription factor (COUP-TF)/erbA-re
214 other receptors, including chicken ovalbumin upstream promoter transcription factor 1 (COUP-TF1), hum
215 cyte nuclear factor [HNF]4/chicken ovalbumin upstream promoter transcription factor 1 and HNF3beta) a
216 ed through the function of chicken ovalbumin upstream promoter transcription factor 2 (COUP-TFII) at
217 The constitutive repressor chicken ovalbumin upstream promoter transcription factor competitively bin
218 he orphan nuclear receptor chicken ovalbumin upstream promoter transcription factor I (COUP-TFI) play
219 nuclear factor 4 (HNF-4), chicken ovalbumin upstream promoter transcription factor I (COUP-TFI), apo
222 in A1 regulatory protein-1/chicken ovalbumin upstream promoter transcription factor II (ARP-1/COUP-TF
223 e nuclear hormone receptor chicken ovalbumin upstream promoter transcription factor II (COUP-TFII) in
224 he orphan nuclear receptor chicken ovalbumin upstream promoter transcription factor II (COUP-TFII) in
226 y through up-regulation of chicken ovalbumin upstream promoter transcription factor II (COUP-TFII).
227 he orphan nuclear receptor chicken ovalbumin upstream promoter transcription factor II (COUP-TFII, al
228 ression, by competing with chicken ovalbumin upstream promoter transcription factor II for the DR1 si
229 embryos lacking Coup-tfII (chicken ovalbumin upstream promoter transcription factor II) in the Wolffi
230 promoters are occupied by chicken ovalbumin upstream promoter transcription factor II, and transcrip
232 and implicate ERRalpha and chicken ovalbumin upstream promoter transcription factor in the control of
233 nly when the orphan receptor chick ovalbumin upstream promoter transcription factor was expressed, or
234 or neurons by the COUP-TF (chicken ovalbumin upstream promoter transcription factor) homolog, UNC-55.
235 ranscription factor CTIP2 (chicken ovalbumin upstream promoter transcription factor-interacting prote
237 n ortholog of the vertebrate chick ovalbumin upstream promoter transcription factors (COUP-TFI and II
238 orphan nuclear receptors, chicken ovalbumin upstream promoter transcription factors I and II, were i
240 e orphan nuclear receptors chicken ovalbumin upstream promoter-transcription factor (COUP-TF) 2 and C
241 ression of orphan receptor chicken ovalbumin upstream promoter-transcription factor (COUP-TF) plays a
242 he orphan nuclear receptor chicken ovalbumin upstream promoter-transcription factor (COUP-TF) repress
245 upregulated mRNAs included chicken ovalbumin upstream promoter-transcription factor (COUP-TF1), retin
246 mone receptor superfamily, chicken ovalbumin upstream promoter-transcription factor 1 (COUP-TFI), pla
249 ion factors, including the chicken ovalbumin upstream promoter-transcription factor COUP-TF, pregnane
250 squito Seven-up (AaSvp), a chicken ovalbumin upstream promoter-transcription factor homologue, is inv
252 neage, relies on COUP-TFI (chicken ovalbumin upstream promoter-transcription factor I), a patterning
254 Here, we have identified chicken ovalbumin upstream promoter-transcription factor II (COUP-TFII) hy
255 ntially important role for Chicken Ovalbumin Upstream Promoter-Transcription Factor II (COUP-TFII) in
257 ment was identified in the chicken ovalbumin upstream promoter-transcription factor II (COUP-TFII) pr
258 show that inactivation of chicken ovalbumin upstream promoter-transcription factor II (COUP-TFII), a
259 Here, we show that the chicken ovalbumin upstream promoter-transcription factor II (COUP-TFII), a
260 n orphan nuclear receptor, chicken ovalbumin upstream promoter-transcription factor II (COUP-TFII).
261 he orphan nuclear receptor chicken ovalbumin upstream promoter-transcription factor II (COUP-TFII; Nr
262 nuclear factor 4alpha, the chicken ovalbumin upstream promoter-transcription factor II, and the perox
264 activating protein-2, and chicken ovalbumin upstream promoter-transcription factor transcription fac
265 mma isoforms as well as to chicken ovalbumin upstream promoter-transcription factor, a member of the
266 the transcription factor, chicken ovalbumin upstream promoter-transcription factor, and two coactiva
267 nd responsiveness, such as chicken ovalbumin upstream promoter-transcription factor, may modulate the
270 h is a distant member of the chick ovalbumin upstream promoter-transcription factors of the orphan nu
271 h U1 snRNP favors productive elongation from upstream promoters, triggering downstream promoter activ
272 lin promoter, with or without its associated upstream promoter (UP) element, we demonstrate that UP e
273 ve 3'-splice site choice is coordinated with upstream promoter use across a long 5'-intron such that
274 r, at low levels in most tissues; and P1, an upstream promoter used extensively in liver and kidney.
276 changes the chromatin structure of the ABCB1 upstream promoter via acetylation of histone H3 initiati
277 approximately 150-base pair region 5' to the upstream promoter was identified that, when stimulated w
278 When transfected into RAW macrophages, the upstream promoter was induced 7-fold by 22(R)-hydroxycho
279 luciferase reporter assay revealed that the upstream promoter was used 2-10-fold less frequently tha
280 start sites into downstream gene bodies and upstream promoters was observed specifically in neuronal
281 ltransferase (CAT) activities directed by 5' upstream promoter were detected preferentially in perfor
283 r to AAV5, >99% of B-AAV RNAs generated from upstream promoters were polyadenylated at (pA)p and henc
284 ing that it cannot be driven by a single far-upstream promoter, which suggests that promoters could b
286 gnition of UP-elements and activators in the upstream promoter with recognition of the -35 element in
287 the MYC proto-oncogene initiates in the near upstream promoter, within which lies the nuclease hypers
288 that a strong core promoter linked to a weak upstream promoter would be functionally analogous to a w