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1 situ hybridization methods for detecting the viral RNA.
2 des a valuable tool for live cell imaging of viral RNA.
3 ells, antibody treatment decreased levels of viral RNA.
4 sid protein (CA) lattice, which encloses the viral RNA.
5 processing the polyproteins translated from viral RNA.
6 1, for an elimination of more than 99.97% of viral RNA.
7 loss of cellular mRNAs and the emergence of viral RNA.
8 eavage efficiency against in vitro-expressed viral RNA.
9 ntigen and specific loss of cells expressing viral RNA.
10 atform that uses Cas13 to detect and destroy viral RNA.
11 increased intracellular cholesterol and DENV viral RNA.
12 are functionally redundant binding sites in viral RNA.
13 he degradation/exit rates for long and short viral RNA.
14 s liquid-liquid phase separation (LLPS) with viral RNA.
15 the establishment of IBs to the synthesis of viral RNA.
16 of immune evasion via m(6)A modification of viral RNAs.
17 the structural landscape of other well-known viral RNAs.
18 at MDA5 detects cellular RNAs in addition to viral RNAs.
19 5)C dysregulates the alternative splicing of viral RNAs.
20 (fM) range for synthetic targets as well as viral RNAs.
21 ovides a means for the specific packaging of viral RNAs.
24 says and newer assays for cells that produce viral RNA after activation(6) may underestimate the rese
25 lowing viral rebound, and we compare rebound viral RNA after ART discontinuation with near full-lengt
31 , antibody increased levels of intracellular viral RNA and changed the primary location of genomic RN
32 nd ribosome-binding protein 1 directly bound viral RNA and each acted at distinct stages in the life
33 izing immunity, as evidenced by detection of viral RNA and induction of anti-nucleoprotein antibodies
34 utrophils, and fetal myeloid cells contained viral RNA and infectious virus, suggesting they may be i
39 tween the dimeric 5'-leader of the unspliced viral RNA and the nucleocapsid (NC) domains of a small n
40 interactions are affected by the presence of viral RNA and the processivity of the polymerase, giving
42 signs and endpoints include weight loss and viral RNA and/or infectious virus in swabs and organs (e
43 age sites associated with all polyadenylated viral RNAs and demonstrate that low level read-through t
45 rize the roles of m(6)A on both cellular and viral RNAs and to describe future directions for uncover
46 bited improved clinical scores, lower plasma viral RNA, and improved markers of kidney function, live
47 ociates with the flavivirus replicase, binds viral RNA, and suppresses viral genome amplification.
49 ion and consequently impairing IN binding to viral RNA; and (iii) directly compromising IN-RNA intera
50 We have previously reported that hepatitis B viral RNAs are m(6)A-modified, displaying a dual functio
54 cterized how a novel IRES at the 5'-UTR of a viral RNA assembles a functional initiation complex via
56 1 (LARP1), two of the most strongly enriched viral RNA binders, restrict SARS-CoV-2 replication in in
58 bly identify capsid binding sites in genomic viral RNA by detecting crosslink-specific uridine to cyt
59 ibit RIG-I-transduced signaling activated by viral RNAs by occupying m(6)A-modified RNAs and inhibiti
60 ic; thus, once-infected neurons survive, and viral RNAs can be detected long after apparent viral con
61 on to its well-characterized function as the viral RNA-capping enzyme.IMPORTANCE Rotaviruses are sign
63 cribe the purification of the nsp1beta:PCBP2:viral RNA complex on a scale sufficient for structural a
66 ger antiviral protein (ZAP) binds regions of viral RNA containing CpGs and targets them for degradati
71 the coverage of the HTNV genome based on the viral RNA copy number, which is quantified by real-time
74 ngs as the major site of infection, although viral RNA could also be found in the eye, heart, and bra
76 RS-CoV-2 transmission hinges on antibody and viral RNA data that inform exposure and shedding, but ex
77 of the coterminous USA, with negative strand viral RNA demonstrating active replication in liver tiss
87 otably, we found that METTL3 interacted with viral RNA-dependent RNA polymerase 3D and induced enhanc
89 ets, most attention is focused on either the viral RNA-dependent RNA polymerase or the main viral pro
90 ources of mutations in virus-derived siRNAs: viral RNA-dependent RNA polymerases responsible for viru
94 , which is transcribed and replicated by the viral-RNA-dependent RNA polymerase (FluPol(A)) composed
97 mple heat and detergent method that extracts viral RNA directly off the particle, allowing a sample p
99 p1beta and PCBP2 both interact directly with viral RNA during formation of the complex to coordinate
100 nd a requirement for multiple Gag binding on viral RNA during HIV-1 genome encapsidation.IMPORTANCE H
101 to trigger the degradation of both host and viral RNA during the type VI CRISPR-Cas antiviral respon
102 es, HIV-2 packages two copies of full-length viral RNA during virus assembly and efficient genome enc
103 of the structures and mechanisms of diverse viral RNA elements that alter or regulate translation, t
104 ng its expression both at the mRNA level via viral RNA endonuclease PA-X and at the polypeptide level
106 mic and negative-sense replicative, template viral RNA; essential viral replication proteins; and cel
108 Metabolic labeling of newly synthesized viral RNA followed by quantitative electron microscopy (
112 eps in the viral life cycle, IBs protect new viral RNA from innate immune attack and contain specific
115 Donor and recipient HIV proviral DNA, and viral RNA from the viraemic timepoint were sequenced usi
116 g infection can improve our understanding of viral RNA functions and the host innate immune response.
117 ) protein forms a conical lattice around the viral RNA genome and the associated viral enzymes and pr
118 on involves the reverse transcription of the viral RNA genome into DNA, which is subsequently integra
119 tep of HIV-1 reverse transcription, in which viral RNA genome is converted into double-stranded DNA,
121 lement) in the 3' untranslated region of the viral RNA genome that allows the virus to usurp a host t
122 rus polymerase, the molecule that copies the viral RNA genome, hijacks cellular proteins to support i
123 ex represents a replication platform for the viral RNA genome, in which one of the FluPol molecules a
126 The primary interactions between incoming viral RNA genomes and host proteins are crucial to infec
127 ies have identified specific sites along the viral RNA genomic template in which reverse transcriptas
128 a drug which reduces the replication rate of viral RNA greatly decreases the total tissue damage and
129 postulated, and using sensitive techniques, viral RNA has been detected in multiple organs in the bo
135 recluding the formation of IN complexes with viral RNA; (ii) adversely affecting functional IN multim
136 ntestinal tract, as revealed by detection of viral RNA in fecal swabs, with sequence analysis documen
137 tive PCR (RT-qPCR) confirmed the presence of viral RNA in formalin-fixed tissues from the wild salmon
141 ion real-time RT-PCR assays for detection of viral RNA in stool specimens and compared performance.
142 receptors (RLRs) are RNA sensors that detect viral RNA in the cytosol and induce an IFN-I response.
144 culation, the real-world studies that detect viral RNA in the environment report very low levels, and
146 hat iciHHV-6 results in the transcription of viral RNA in the human placenta and predisposes the moth
149 gastrointestinal symptoms and high levels of viral RNA in the stool suggest active severe acute respi
152 rvived fixation and allowed visualization of viral RNAs in differentiated neurons and mouse brain, as
154 ting protein expression; producing noncoding viral RNAs (including microRNAs) to suppress lytic gene
156 ibosomal frameshifting during translation of viral RNA, indicating that mechanical forces may play a
157 g dendritic cells in response to a synthetic viral RNA induces barrier damage, causing susceptibility
158 vian influenza A viruses (FluPolA) replicate viral RNA inefficiently in human cells because of specie
159 anscriptase (RT) catalyzes the conversion of viral RNA into DNA, initiating the chain of events leadi
163 ed Internal Ribosomal Entry Sites (IRES), in viral RNAs is a widespread strategy for the exploitation
165 Upon infection with similar virus doses, viral RNA load and IFN expression were substantially hig
169 f the KoRV genome and the proviral (DNA) and viral (RNA) loads of 71 northern and 97 southern koalas.
171 o avoid detection by innate immunity and (2) viral RNA m(6)A can serve as a target to attenuate HMPV
173 racterizing the interactions that SARS-CoV-2 viral RNAs make with host cell proteins during infection
174 infectious disease, the abundant presence of viral RNAs may play an immunomodulatory role in the deve
177 lly deleted viral RNAs (vRNAs) known as mini viral RNAs (mvRNAs) and defective interfering RNAs (DI R
178 Our results provide a mechanism to clear the viral RNA of ribosomes in order to promote efficient rep
179 gle-stranded RNA viruses.IMPORTANCE Uncapped viral RNAs often rely on their 5' leader sequences to in
180 ound that polyamine depletion did not impact viral RNA or protein accumulation, despite significant d
181 eal-time reverse transcription PCR to detect viral RNA or rapid diagnostic tests based on immunoassay
182 of Zika, chikungunya, or dengue infection by viral RNA or specific IgM antibodies in serum or CSF.
183 cal and biochemical methods, we identify the viral RNA-packaging motif of a segmented dsRNA virus for
184 enhanced by dsRNAs, including the influenza viral RNA panhandle duplex and HIV-1-1 ribosomal framesh
187 e in vitro and in cell-based assays that the viral RNA polymerase, NS5, inhibits translation of the v
188 appears to regulate its accessibility to the viral RNA polymerase, thus placing constraints on codon
191 lacking E1B55K or E4orf6 display defects in viral RNA processing and protein production, but previou
192 f RALY and hnRNP-C relieves a restriction on viral RNA processing and reveal an unexpected role for n
194 ydrolysis may contribute to the reduction in viral RNA production characteristic of the flavivirus re
196 a critical innate immune sensor of not only viral RNA products but also endogenous nucleic acid liga
199 ral RNase L activity, through a mechanism of viral RNA protection that is not mimicked during infecti
200 llowing facile insertion of Favipiravir into viral RNA, provoking C-to-U and G-to-A transitions in th
202 y, we show that RIG-I-like receptors (RLRs), viral RNA receptors with helicase domains, interact with
203 (METTL3 and METTL14) leads to an increase in viral RNA recognition by retinoic acid-inducible gene I
205 ertants (L420V and L420I) restored efficient viral RNA recombination, confirming that ribavirin-induc
206 , the mechanism underlying IL-1beta-mediated viral RNA reduction remains incompletely understood.
209 protein of SARS-CoV, which is essential for viral RNA replication and packaging into new virions.
212 d endosomal neutralization not only prevents viral RNA replication but also affects the maturation of
213 IKV nsP2 not only has enzymatic functions in viral RNA replication but also is a critical inhibitor o
218 We confirm that both bRSV and human RSV viral RNA replication takes place in these inclusion bod
226 IAV genome consists of eight single-stranded viral RNA segments contained in separate viral ribonucle
228 een found to regulate host responses such as viral RNA sensing, cytokine responses, and immune cell f
233 9, A/H3N2 or influenza B virus had prolonged viral RNA shedding (+/-1-2 days) compared with older chi
236 by determining the area under the curve for viral RNA shedding using logistic regression and Kaplan-
237 down of RALY and hnRNP-C increased levels of viral RNA splicing, protein abundance and progeny produc
239 tructural protein 2A (NS2A protein) recruits viral RNA, structural proteins, and protease to the site
240 e proteins within vRNPs, characterization of viral RNA structure using conventional structural method
242 al tools are emphasized for the detection of viral RNAs, surface antigens, whole viral particles, ant
243 learly establish DMVs as the central hub for viral RNA synthesis and a potential drug target in CoV i
244 tion, these substitutions result in aberrant viral RNA synthesis and correlate with patient outcome.
245 ctively, we establish a spatial link between viral RNA synthesis and diverse host factors of unpreced
246 scopy (EM) autoradiography revealed abundant viral RNA synthesis associated with DMVs in cells infect
247 ditionally, due to the error-prone nature of viral RNA synthesis in an individual patient, the EBOV g
251 virus RNA synthesis, specific activities of viral RNA synthesis were correlated with the genomic RNA
252 viral polymerase VP1 mediates all stages of viral RNA synthesis, and it requires the core shell prot
253 this interaction is a positive regulator of viral RNA synthesis, and that the interfaces mediating i
260 ins of SINV that have genomic and subgenomic viral RNAs tagged with the Broccoli RNA aptamer that bin
261 nt viral polymerase reinitiation on the same viral RNA template (deletion DI species) or the nascent
262 aves the 5'-polyuridines from negative-sense viral RNA, termed PUN RNA, which is the product of polyA
264 e are helical nucleocapsids (NCs), formed by viral RNAs that are encapsidated by the nucleoprotein (N
266 as well as replication of the virus genome (viral RNA) through a complementary RNA intermediate.
269 fluenza A virus (IAV) is responsible for the viral RNA transcription and replication in the nucleus,
270 hosphoprotein, an essential component of the viral RNA transcription/replication machine and a compon
272 at DAP5 is required for the initial round of viral RNA translation by sustaining a basal level of CVB
275 ost sensitive test involves the detection of viral RNA using RT-qPCR (quantitative reverse transcript
276 internal ribosome entry sites (IRESs) in the viral RNAs, using different sets of host translation ini
277 portion of surface samples contaminated with viral RNA varied by item sampled and by clinical area.
278 (gRNA) from the bulk of cellular and spliced viral RNAs via its nucleocapsid (NC) domain and drives g
279 small interfering RNAs (siRNAs) derived from viral RNA (virus-derived siRNAs) through gene silencing.
282 influenza A virus (IAV) from negative-sense viral RNA (vRNA) requires the generation of positive-sen
283 f nucleoprotein (N), phosphoprotein (P), and viral RNA (vRNA), indicating that these structures are c
289 Compared to observations from other regions, viral RNA was detected more frequently in feces (80%) an
295 tween host RNA-binding proteins and incoming viral RNA, we show that EMC is required at or prior to v
296 r, deleted or full-length and mixed forms of viral RNA were capable of directing translation and prod
297 d in a greater than 10,000-fold reduction in viral RNA, which could be rescued by ectopic expression
298 id, premembrane, and envelope), packaging of viral RNA with C protein into nucleocapsid, and budding
299 obust, can consistently detect two copies of viral RNA, with a limit of detection of a single copy an