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2 hemic injury in vivo The minimal syntaxin 1A-binding sequence of Kv2.1 C terminus (C1aB) was first id
5 neurotransmitter release by virtue of Ca(2+)-binding to their two C2 domains, but their mechanisms of
8 at regulated expression of cytosolic poly(A)-binding protein 1 (PABPC1) modulates protein synthetic c
10 ied the YEATS domain as a novel acetyllysine-binding module; however, the functional importance of YE
12 ndroitin sulfate-containing, hyaluronic acid-binding proteoglycan present in the extracellular matrix
13 second-pulsed laser to bleach a nucleic acid-binding dye causing dose-dependent apoptosis of individu
14 r ICAM-1 is negatively regulated by an actin-binding adaptor protein, i.e., CD2AP, to allow a balance
15 ontaining a proline-rich domain and an actin-binding Wiskott-Aldrich syndrome protein homology 2 (WH2
16 mods have alternating tropomyosin- and actin-binding sites (TMBS1, ABS1, TMBS2, ABS2), Lmods lack TMB
17 9-amino-acid protein containing five F-actin-binding sites and two G-actin-binding sites, and interac
18 g five F-actin-binding sites and two G-actin-binding sites, and interacts with wheat (Triticum aestiv
19 beta-III-spectrin, and likely similar actin-binding proteins, interact with actin, and how this mech
20 16 of protein 4.1R encodes a spectrin/actin-binding peptide critical for erythrocyte membrane stabil
21 ia type 5 (SCA5) L253P mutation in the actin-binding domain (ABD) of beta-III-spectrin causes high-af
26 (18)F-florbetapir (Amyvid) is an amyloid-binding PET ligand with a half-life suitable for clinica
27 residue Val-136, which lines the anesthetic-binding cavity, its flanking residues (132 to 140), and
30 d Hex nanocarrier exhibited similar antibody-binding behavior, but delivered more antibodies to their
33 nitial prediction of human leukocyte antigen-binding peptides by in silico algorithms, but the predic
36 three of the GW/WG repeats in its Argonaute-binding domain: motif-1, motif-2, and the hook motif.
37 se seeded by the aggregation of specific ASO-binding proteins such as FUS/TLS (FUS) and PSF/SFPQ (PSF
38 B4 (MDR3) is an adenosine triphosphate (ATP)-binding cassette (ABC) transporter expressed at the cana
39 protein complex LptB2FG is unique among ATP-binding cassette transporters because it extracts lipopo
42 Multidrug resistance (MDR) mediated by ATP-binding cassette (ABC) transport proteins remains a majo
45 nteractions with purified P-gp and other ATP-binding cassette transporters that transport amphipathic
50 splayed increased expression of S100 calcium-binding A4 (S100A4), a protein linked to cancer cell pro
51 se, myosin light chain, sarcoplasmic calcium-binding protein, and hemocyanin are the most relevant.
55 n start sites (TSS), and the number of CCCTC-binding factor (CTCF)-cohesin complexes between the inte
56 ecruiting a complex containing Cla4, a Cdc42-binding effector, Bem1, a scaffold, and Cdc24, a Cdc42 G
63 so includes the light-harvesting chlorophyll-binding proteins of photosystems I and II, the early-lig
64 ntify two, to our knowledge, new cholesterol-binding sites on the A2A adenosine receptor, a G-protein
65 unclear whether PFO* and related cholesterol-binding proteins bind uniformly to the plasma membrane o
66 ring a cavity resembling that of the choline-binding protein ChoX, as revealed by crystal and density
67 us, our work identifies a critical chromatin-binding DNA damage response factor, ZMYM3, which modulat
70 ical peptide that reconstitutes the collagen-binding domain for integrins GFOGER reverted the assembl
72 re repeats can initiate at subtelomeric CTCF-binding sites to generate telomere repeat-encoding RNA (
74 ared concentrations of 25(OH)D and vitamin D-binding protein (VDBP) in AA and EA women and investigat
75 ng of the temperature dependence of the DBMP-binding energy and emission intensity shows that the DBM
78 In this paper, we present iDNAProt-ES, a DNA-binding protein prediction method that utilizes both seq
79 seq and 4sU-RNA-seq to identify aberrant DNA-binding events genome wide and ectopic transcriptional c
81 RARbeta ligand-binding domain (LBD) and DNA-binding domain (DBD) are physically connected to foster
82 omplexa-specific proteins containing AP2 DNA-binding domains (ApiAP2s) was identified in malaria para
83 like factor-1 (KLF1) leads to degenerate DNA-binding specificity in vivo, resulting in ectopic transc
84 the X-ray crystal structure of an EBNA1 DNA-binding domain (DBD) and discovered a novel hexameric ri
86 es or heterozygous males with an ERalpha DNA-binding domain mutation knocked in (WT/KI) to produce WT
88 nalysis of enriched transcription factor DNA-binding sites in the promoters of differentially express
90 ation in the characteristic caliper-like DNA-binding conformation and the second monomer exhibiting d
93 nism by which competitive recruitment of DNA-binding nuclear receptors/transcription factors in trans
94 cAMP responsive element binding protein DNA-binding activity prevented the proliferative effects of
95 and a beta-hairpin within this putative DNA-binding cleft that are essential for catalytic activity.
96 rated that Hop1 is a structure-selective DNA-binding protein exhibiting high affinity for the Hollida
97 lex, incorporating the sequence-specific DNA-binding protein Cep3 together with regulatory subunits C
99 ize the cell-to-cell transmission of TAR DNA-binding protein and alpha-synuclein, involved in amyotro
100 been well studied for over a decade, the DNA-binding activities and the biological functions of these
101 a (RXRalpha), and phosphorylation of the DNA-binding domain (DBD) at Thr-38 in CAR regulates this con
104 d knockin mice with a mutation in the TR DNA-binding domain that abrogates binding to DNA and leads t
105 er-inducing interferon-beta (TRIF) and Z-DNA-binding protein 1 (ZBP1)/DNA-dependent activator of IFN-
106 /2 [LIM domain only 1 or 2]:LDB1 [LIM domain-binding protein 1]) and dynamic recruitment of conserved
108 three 3'CITEs enhance translation: the eIF4E-binding Panicum mosaic virus-like translational enhancer
109 WT mice, including sterol regulatory element-binding protein 1c target gene fatty-acid synthase (3.0-
111 show that the carbohydrate response element-binding protein (ChREBP) coordinates an adaptive respons
112 is a direct target of cAMP response element-binding protein (CREB) that is activated by beta-adrener
113 e --> cAMP --> PKA --> cAMP response element-binding protein pathway mediating cell survival and the
115 ifically, in the presence of ethylene, ENAP1-binding regions are more accessible upon the interaction
117 n vivo Furthermore, live-cell imaging of end-binding protein 3 tagged with EGFP (EB3-GFP) in primary
119 Finally, analysis of transcription factor-binding site motifs of differentially dysregulated genes
121 nto a hexameric coiled-coil bundle and an Fc-binding Protein A fragment, we generated the Hex nanocar
123 .3-fold increase after 1 h for the high FcRn-binding albumin variant compared with wild-type albumin.
124 n in cell culture media corresponded to FcRn-binding affinity, with a approximately 3.3-fold increase
126 onstrate that amino acid substitutions in Fn-binding repeat-9 can significantly affect bond strength
129 2 coactivated the transcription factors GATA-binding protein 4 (GATA-4) and hypoxia-inducible factor
131 with other amino acid residues in the GERAMT-binding site for proper chaperone-dependent regulation o
132 eceptor (NMDAR) is controlled by a glutamate-binding site and a distinct, independently regulated, co
134 rs investigations into the biology of glycan-binding proteins, which in turn complicates the biomedic
139 post-translational prenylation of small GTP-binding proteins such as Rho and Rac, and their downstre
140 site shows structural similarity to the GTP-binding site of MoaA, suggesting that the viperin substr
141 nitrite reductase gene (aniA), the factor H-binding protein gene (fHbp), and the capsule biosyntheti
143 aled that specific modifications in the heme-binding (R374W and R448C) or substrate-binding (W116C) s
144 e than one modification, cluster in the heme-binding site, supporting a hierarchy of vulnerable amino
145 get protease kallikrein 7 (KLK7) are heparin-binding proteins, and inhibition of KLK7 by vaspin is ac
146 s study, we identified and characterized IgE-binding proteins from the mosquito species Aedes aegypti
148 hermore, we report that calcium and integrin-binding protein 2 binds to the components of the hair ce
149 sitive competition ELISA to measure integrin-binding of RGD-peptides in high-throughput without using
150 ic homeostasis suggest that the RGD integrin-binding domain of IGFBP-1 may be a promising candidate f
153 he length of the linker between the two iron-binding catecholamide units was increased from four carb
155 uctural studies of the beta1AR define ligand-binding sites in the transmembrane helices and effector
156 ucts lacking the entire extracellular ligand-binding domain of the receptor while retaining the trans
157 display near-identical extracellular ligand-binding regions but have intracellular sequences with op
158 AXS) experiments using isolated GluA2 ligand-binding domain (GluA2-LBD) are consistent with binding o
160 he crystal structure of the PPARgamma ligand-binding domain (LBD) in complex with VSP-51, which revea
164 positive allosteric modulators of the ligand-binding domain of (S)-2-amino-3-(3-hydroxy-5-methylisoxa
168 action of the TRIP13 AAA-ATPase and the Mad2-binding protein p31(comet) Now we have isolated from ext
169 d effects of full-length PTEN but a membrane-binding defective mutant of the C2 domain abrogated thes
170 n may affect the positioning of the membrane-binding functions of the F2 subdomain and the integrin-b
171 ilization requires the conserved microtubule-binding Ska complex, which enriches at attachment sites
172 bits the NLS and the neighboring microtubule-binding domain, and RhoA-GTP binding may relieve this in
174 that She1 directly contacts the microtubule-binding domain of dynein, and that their interaction is
176 o identify canonical and non-canonical miRNA-binding sites from peaks identified by Ago2 Cross-Linked
179 MYBPC3, encoding cMyBP-C (cardiac myosin-binding protein C), is the most frequently mutated HCM g
184 containing 1 (NLRP1), NLRP3, and nucleotide-binding oligomerization domain (NOD)-like receptor C4 (N
185 e demonstrate that both TNF-R and nucleotide-binding oligomerization domain stimulation promote ATG16
186 that TRIP8b binds the HCN cyclic nucleotide-binding domain through a 37-residue domain and the HCN C
187 able docking and undocking of its nucleotide-binding domain (NBD) and substrate-binding domain (SBD).
188 's disease susceptibility protein nucleotide-binding oligomerization domain-containing 2 (NOD2); howe
190 hus, the NTRs affect the specific nucleotide-binding properties of MYO1C isoforms, adding to their ki
191 s, recent evidence indicates that nucleotide-binding oligomerization domains (NODs) can also recogniz
192 el predicted that a region in the nucleotide-binding domain (NBD) of DnaK interacted with a region in
195 on to dentilisin, most notably, oligopeptide-binding proteins (OBPs) and the beta-barrel of BamA.
197 que as well as conserved elements in the PAR-binding pocket that can serve as hotspots for the develo
199 ch in a manner similar to other acidic patch-binding proteins such as herpesvirus latency-associated
201 induces transcriptional coactivator with PDZ-binding motif (TAZ) expression, which is required for os
203 ed that HLA-C*06:02 possesses a deep peptide-binding groove comprising two electronegative B- and E-p
207 n STN1 engenders a selective defect in POLA2-binding and PP stimulation, indicating that these activi
208 sPs and PtdInsPs interact with the polyanion-binding site located on an inner chamber wall of the enz
209 nding and increased CTCF binding in promoter-binding assays, and risk allele carriage diminished tran
211 und -260 and -230 mV, respectively, in the Q-binding site, respectively, suggesting that release of t
215 ed on the apex of the molecule; the receptor-binding mode might be different from that of retroviruse
216 ted in multiple key residues in the receptor-binding motif (RBM) of RBD and demonstrated their strong
218 Nonetheless, the evolution of the receptor-binding site and the stem region on HA is severely const
222 rkers of dedifferentiation, cellular retinol-binding protein 1, and matrix metalloproteinase 2, compa
224 ke translational enhancer (PTE) and ribosome-binding 3' T-shaped structure (TSS) have been found in v
225 uses of different genera, while the ribosome-binding kl-TSS that provides a long-distance interaction
226 n synapses by perturbing the function of RIM-binding proteins (RBPs) as central active-zone scaffoldi
228 ed to HeLa cells, RBDmap uncovered 1,174 RNA-binding sites in 529 proteins, many of which were previo
230 The Human antigen R protein (HuR) is an RNA-binding protein that recognizes U/AU-rich elements in di
231 nslation machinery and interacts with an RNA-binding protein, FMRP, to promote synapse formation; and
236 This removal is controlled in part by RNA-binding proteins that regulate alternative splicing deci
237 Neuronal protein 3.1 (P311), a conserved RNA-binding protein, represents the first documented protein
238 2 h of hypoxic exposure might deactivate RNA-binding protein BRF1, hence resulting in the selective d
239 r topoisomerases, contains a distinctive RNA-binding domain; and deletion of this domain diminishes t
241 Characterizing the binding behaviors of RNA-binding proteins (RBPs) is important for understanding t
243 Liquid-liquid phase separation (LLPS) of RNA-binding proteins plays an important role in the formatio
246 d RNA via oligo(dT), it will not provide RNA-binding information on proteins interacting exclusively
249 have enriched binding motifs for several RNA-binding proteins, which implies extensive translational
250 tion of the RNA-silencing factor HIV TAR-RNA-binding protein (TRBP) promotes binding and stabilizatio
251 try, we further uncovered binding of the RNA-binding protein HuR to the -44 region, where it acts as
254 , we identify that PrimPol possesses two RPA-binding motifs and ascertained the key residues required
256 gulation of recombinant recognition sequence-binding protein at the Jkappa site (RBP-J) protein, a po
257 s designed based on the sonic hedgehog (Shh)-binding loop of hedgehog-interacting protein (HHIP) and
258 ulted from substitution T401A in the 2nd SIA-binding site, indicating that substrate binding via this
259 ll-specific deletion of recombination signal-binding protein for immunoglobulin Jkappa region (RBPJka
263 neered with adhesive and morphogenetic solid-binding peptides is a promising route for synthesizing h
264 me-wide double-strand breaks enriched at Ssb-binding regions and CpG islands, together with the accum
268 ontains four domains (I-IV), and a substrate-binding domain immediately precedes the catalytic domain
270 the nucleotide-binding domain and substrate-binding domain) in response to adenine nucleotides and s
271 ctivity is repressed by a flanking substrate-binding leucine-rich repeat (LRR) domain when substrate
272 heme-binding (R374W and R448C) or substrate-binding (W116C) site of 11beta-hydroxylase, or alteratio
274 insertion of reporter molecules and surface-binding agents in specific locations, which have been re
275 poly(carboxylbetaine) (pCB) and four surface-binding l-3,4-dihydroxyphenylalanine (DOPA) groups, pCB-
277 ealed that ciA-C2 partially occupies the SV2-binding site on HCA1, causing direct interference of HCA
278 of the interaction between ICP34.5 and TANK-binding kinase 1 (TBK1), an activator of IFN responses.
279 e describe a platform for identifying target-binding cystine-dense peptides using mammalian surface d
281 TBK1 under certain conditions through a TBK1-binding domain (TBD), there was no direct impact of the
283 ce, we show that TERF1 evolved as a telomere-binding protein in the common stem lineage of marsupial
284 al interactions between Blm and two telomere-binding proteins, which may thus recruit or regulate Blm
285 s contain multiple transcription factor (TF)-binding sites and integrate the effects of each TF to co
286 represent the first analysis of OCRs and TF-binding sites in distinct populations of postmortem huma
287 conjunction with its N-terminal thioredoxin-binding domain, along with a central regulatory region t
291 TOGs have distinct architectures and tubulin-binding properties that underlie each family's ability t
292 was induced in wild-type (WT) and ubiquitin-binding deficient ABIN1[D485N] mice, and renal pathophys
293 lated regions (UTRs) of MICA, MICB, and UL16-binding protein 2 were shown to be regulated by RBPs and
294 both VEGFR2 and NRP1, including the VEGF164-binding site of NRP1 and the NRP1 cytoplasmic domain (NC
299 at the enzyme represents a new class of zinc-binding flavin-dependent halogenases and provides new in
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