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1 ASF also induced weaker type-C self-association of galec
2 ASF and FET glycocoproteins were unambiguously detectabl
3 ASF participation was associated with significant increa
4 ASF/SF2 activates exon 3 inclusion, but SC35, acting thr
5 ASF/SF2 bound to a discrete region containing a purine-r
6 ASF/SF2 is an SR protein splicing factor that participat
7 ASF/SF2 modification is not altered when the inhibitor p
8 ASF/SF2 thus plays an important role in viral RNA expres
9 ASF/SF2, a member of the serine-arginine (SR) protein fa
10 ASF/SF2, a splicing factor known to prevent RLF, and GTP
13 ddition, the assay format for the galectin-3/ASF pair could be easily applied in screening for glycan
16 we demonstrate that the SR proteins 9G8 and ASF/SF2 exhibit higher affinity for TAP/NXF1 when hypoph
19 t two SR protein splicing factors, SRp20 and ASF/SF2, associate with interphase chromatin, are releas
20 Although domain swaps between SRrp86 and ASF/SF2 showed that the RRMs primarily determined splici
22 ncers and their binding proteins (U2AF65 and ASF/SF2) that had critical roles in splicing AR pre-mRNA
24 itor of binding when a single ligand such as ASF is used will be as effective when used in studies wi
25 inities to multivalent glycoproteins such as ASF, independent of the quaternary structures of the gal
26 sequestering repeat-binding proteins such as ASF/SF2 and hnRNPA1, suggesting a toxic RNA pathogenesis
27 lalpha1-3GalNAc (TF-AuNP), (2) asialofetuin (ASF) containing both LacNAc (Galbeta1-4GlcNAc) and TF-an
28 ermining the IC(50) values for asialofetuin (ASF) and for bovine serum albumin derivatized with an av
29 -3 with the model glycoprotein asialofetuin (ASF), using a fluorescence anisotropy assay to measure t
31 ity in the ITC binding data of asialofetuin (ASF), a glycoprotein that possesses nine LacNAc epitopes
32 several regions were indicated for baseline ASF, only 4q31.22-q32.2 and 11p15.4-p11.2 replicated the
33 y, we show a significant correlation between ASF/SF2 and CD3zeta protein levels in T cells from syste
34 nly weak and equivalent interactions between ASF/SF2 and other SR proteins with the 5' ends of SMN1 a
35 s, whereas biotinylated asialofetuin (biotin-ASF), a galectin-3 nanomolar binding partner, was bound
41 ore and after a single season of competitive ASF participation in 6 consecutive groups of first-year
42 e there are no vaccines available to control ASF after an outbreak, obtaining an understanding of the
46 ' splice site for BPV-1 RNA splicing in DT40-ASF cells, a genetically engineered chicken B-cell line
48 netically modified chicken B-cell line, DT40-ASF, we now show that ASF/SF2 inactivation results in a
49 ript, and deletion of this region eliminated ASF/SF2-mediated regulation of transcript stability.
50 epleted cells compared with cells expressing ASF/SF2, indicating a negative role for the SR protein.
55 ned at the C terminus of the splicing factor ASF/SF2 (ASF-CTD) and an RS domain deletion mutant prote
57 We identify the essential splicing factor ASF/SF2 as a key component of the program, regulating a
59 dependent on the SR protein splicing factor ASF/SF2 or to the creation of an exonic splicing silence
62 ceral fat (AVF), abdominal subcutaneous fat (ASF), and abdominal total fat (ATF) were measured using
65 immunization.IMPORTANCE African swine fever (ASF) is endemic in Africa, parts of the Trans Caucasus,
72 hen inoculated with altered Schaedler flora (ASF), a defined consortium of 8 bacteria with minimal ur
73 foods, GF cookies using alfalfa seed flour (ASF), at different substitution levels to common rice fl
74 ession patterns in the apical surface fluid (ASF) from aberrantly differentiated squamous metaplastic
76 trategy, we monitored the progress curve for ASF/SF2 phosphorylation in the absence and presence of a
77 is a macrophage-tropic virus responsible for ASF, a transboundary disease that threatens swine produc
78 en implicated in two independent studies for ASF; further research is warranted to identify the genes
81 hicken B-cell line that expresses only human ASF/SF2 controlled by a tetracycline-repressible promote
82 genes are functional homologues of the human ASF/SF2 alternative splicing factor and they indicate a
83 a strong structural similarity to the human ASF/SF2 splicing factor and to the Arabidopsis atSRp34/p
86 ture of selective phosphate incorporation in ASF/SF2, region-specific phosphorylation in the RS domai
88 have recently shown that a docking motif in ASF/SF2 specifically interacts with a groove in SRPK1, a
90 Two N-terminal RNA recognition motifs in ASF/SF2 control access to the RS domain and guide the di
91 The relative increase in PP after PPVL in ASF and specific pathogen-free mice was not significantl
92 specific mapping of phosphorylation sites in ASF/SF2 as a function of the protein phosphatase PP1.
93 vels were increased approximately sixfold in ASF/SF2-depleted cells compared with cells expressing AS
94 rescued viral RNA expression and splicing in ASF/SF2-depleted cells is mediated through the phosphati
95 reover, in a murine model of hepatic injury, ASF transplantation was associated with decreased morbid
98 ough the observed K(a) values for binding of ASF to the galectins and two truncated forms are only 50
99 n flanking sequences induce conformations of ASF/SF2 that increase the lifetime of phosphates in the
100 thway and reveal the central contribution of ASF/SF2-regulated CaMKIIdelta alternative splicing to fu
104 es a specific region within the RS domain of ASF/SF2 by using a fully processive catalytic mechanism,
106 n the N-terminal portion of the RS domain of ASF/SF2 while Clk/Sty was able to transfer phosphate to
108 he N-terminal half of the basic RS domain of ASF/SF2, which is destined to be phosphorylated, is boun
110 topes shows that the first LacNAc epitope of ASF binds with approximately 6000-fold higher affinity t
117 Strikingly, siRNA-mediated knockdown of ASF/SF2 caused retention of HP1 proteins on mitotic chro
120 se results suggest that the docking motif of ASF/SF2 is a key regulatory element for sequential phosp
122 s docking motif restricts phosphorylation of ASF/SF2 by SRPK1 to the N-terminal part of the RS domain
127 een implicated in mRNA export, prevention of ASF/SF2 from shuttling had little impact on mRNA export.
128 ults support a model by which recruitment of ASF/SF2 to nascent transcripts by RNA polymerase II prev
130 further show that Clk/Sty causes release of ASF/SF2 from speckles by phosphorylating the C-terminal
131 of the galectins for the first epitope(s) of ASF are in the nanomolar range, with a gradient of decre
136 Here, we identify the RNA-binding protein ASF/SF2 as a critical, allele-specific, disease-relevant
140 ne-serine (RS)-rich domain of the SR protein ASF/SF2 is phosphorylated by SR protein kinases (SRPKs)
141 ion of the RS domain (RS1) of the SR protein ASF/SF2, a modification that promotes nuclear entry of t
144 ide evidence that a prototypical SR protein, ASF/SF2, is unexpectedly required for maintenance of gen
145 a heart-specific knockout of one SR protein, ASF/SF2, produces cardiomyopathy and misregulation of sp
147 The mammalian serine-arginine (SR) protein, ASF/SF2, contains multiple contiguous RS dipeptides at t
148 his, SELEX-binding sites for the SR proteins ASF/SF2, 9G8, and SRp20 were able to stimulate polyadeny
149 translational turnover of splicing regulator ASF/SF2, which directly binds and regulates these target
153 e C terminus of the splicing factor ASF/SF2 (ASF-CTD) and an RS domain deletion mutant protein (ASFDe
157 mRNA in unstimulated cells, whereas the SF2 (ASF)-mRNA interaction was much lower after stimulation w
162 serine/arginine-rich splicing factor 1) (SF2/ASF, splicing factor 2/alternative splicing factor), an
163 ings identify for the first time that an SF2/ASF binding site also can serve as a 3' ss in a transcri
164 usly attributed either to the loss of an SF2/ASF-dependent exonic splicing enhancer or to the creatio
166 ified as hnRNP A1, hnRNP H, hnRNP F, and SF2/ASF by site-specific cross-linking and immunoprecipitati
167 kidney cells demonstrated that SRp20 and SF2/ASF increase exon inclusion but that CUG-BP1 causes exon
168 ch (SR) proteins SC35, SRp40, SRp55, and SF2/ASF involved in alternative RNA splicing were predicted
170 ice sites, and tethering of hnRNP A1 and SF2/ASF proteins between competing splice sites mimicked the
171 nd that the relative ratios of SRp20 and SF2/ASF to CUG-BP1 in different cells determine the degree o
173 which are recognized by SC35, SRp55, and SF2/ASF) or GGTTGTTGAGG (nucleotides 27-37 from the 5' end,
175 HPV16 infection upregulates hnRNP A1 and SF2/ASF, both key factors in alternative splicing regulation
177 he basis of their functional antagonism; SF2/ASF enhances U1 snRNP binding at all 5'SSs, the rise in
178 trate that hnRNP A/B proteins antagonize SF2/ASF-dependent ESE activity and promote exon 7 skipping b
180 (SR) protein SRSF1 (previously known as SF2/ASF) is a splicing regulator that also activates transla
181 s mediated by direct interaction between SF2/ASF and the primary miR-7 transcript to facilitate Drosh
183 the mTOR pathway in cells transformed by SF2/ASF and found that this splicing factor activates the mT
190 lates IL-2 production and that decreased SF2/ASF expression in SLE T cells contributes to deficient I
191 g RNA-mediated suppression of endogenous SF2/ASF and Tra2beta significantly reduces exon 10 splicing.
194 lar concentration of the splicing factor SF2/ASF augments the efficiency of NMD and ultimately shifts
195 ous work showed that the splicing factor SF2/ASF binds to this FP region and stimulates splicing of i
198 ng factor 2/alternative splicing factor (SF2/ASF) enhances the expression of CD3zeta chain by limitin
199 ng factor 2/alternative splicing factor (SF2/ASF) expression in differentiated mouse erythroleukemia
200 ng factor 2/alternative splicing factor (SF2/ASF) to be important in the expression of CD3zeta chain.
202 e that the antagonistic splicing factors SF2/ASF and hnRNPA1 act as potent regulators of G alpha(s) i
204 Here, we show that splicing factors SF2/ASF, Tra2beta, and a 50-kDa nuclear protein bind in vitr
206 r results uncover an additional role for SF2/ASF and indicate that the efficiency of the pioneer roun
208 PI3K/Akt signaling and is essential for SF2/ASF-mediated transformation, as inhibition of mTOR by ra
211 ed TAP binding correlates with increased SF2/ASF binding, but not increased REF/Aly or Y14 binding.
212 iR-7) can form a negative feedback loop: SF2/ASF promotes miR-7 maturation, and mature miR-7 in turn
213 e-site mutations were smaller, had lower SF2/ASF motif scores, a decreased availability of decoy spli
216 sitive charge regulate the activities of SF2/ASF and emphasizes the significance of localization cont
217 ggest that tissue-specific expression of SF2/ASF and hnRNPA1 governs the expression of alternative is
218 control the subcellular localization of SF2/ASF and that both the positive charge and the methylatio
219 s show that the C-terminal RS domains of SF2/ASF and Tra2beta are required for normal exon 10 splicin
220 These results underscore a function of SF2/ASF in pri-miRNA processing and highlight the potential
222 activity is mediated by interactions of SF2/ASF with both mTOR and the phosphatase PP2A, two key reg
224 ore importantly, we reveal a function of SF2/ASF, independent of T-cell receptor/CD3 signaling, where
227 ncorporates information from both of our SF2/ASF-specific matrices and that accurately predicts the e
233 ESEs responsive to the human SR proteins SF2/ASF, SC35, SRp40 and SRp55, and to predict whether exoni
236 e well-known exonic splicing regulators, SF2/ASF and hnRNP A1, to the splicing of an exon primarily c
237 trix, along with our previously reported SF2/ASF score matrix, was used to search the sequences of tw
239 of two prototypical SR proteins, SRSF1 (SF2/ASF) and SRSF2 (SC35), using splicing-sensitive arrays a
240 A-processing: the splicing factor SRSF1 (SF2/ASF), the RNA helicase p68 (DDX5), and the heterogeneous
242 Cross-linking experiments show that SF2/ASF and hnRNP A1 compete to bind pre-mRNA, and we conclu
249 ecular Cell, Michlewski et al. show that SF2/ASF, a splicing factor, stimulates translation initiatio
251 hen the 3' splice site is weak, both the SF2/ASF RS domain and U2AF(35) are required for splicing.
255 These findings suggest the model whereby SF2/ASF functions as an adaptor protein to recruit the signa
256 esults suggest that clinical tumors with SF2/ASF up-regulation could be especially sensitive to mTOR
257 er translation initiation complexes with SF2/ASF, translationally active ribosomes, and the translati
259 preferentially interact with itself, SRp20, ASF/SF2, SRp55, and, to a slightly lesser extent, SC35.
260 he 2.9 A crystal structure of the core SRPK1:ASF/SF2 complex reveals that the N-terminal half of the
261 evated levels of RNA-binding proteins SRSF1 (ASF/SF2), SRSF9 (SRp30c), and HuR that are known to regu
263 ex with its heterologous mammalian substrate ASF/SF2 and processively phosphorylates the same sites a
264 rylation on a specific SR protein substrate, ASF/SF2, is modulated by autophosphorylation but also th
265 rine/arginine-rich (SR) protein superfamily (ASF/SF2 and SC35) act antagonistically to regulate exon
269 cken B-cell line, DT40-ASF, we now show that ASF/SF2 inactivation results in a G2-phase cell cycle ar
271 report demonstrates for the first time that ASF/SF2 is required under physiological conditions for t
273 he p32 protein, previously identified as the ASF/SF2 splicing factor-associated protein, copurified w
276 ntains 10 Psis and 6 are concentrated in the ASF helix (3 of the ASF Psis are conserved among eukaryo
277 etic depletion analysis that the Psis in the ASF helix and adjoining helices are not crucial for cell
278 analysis revealed 174 unique proteins in the ASF of squamous NHTBE cells compared with normal mucocil
281 factor and they indicate a diversity of the ASF/SF2-like alternative splicing factors in monocot pla
287 doexon of a sequence selected for binding to ASF/SF2 or its replacement with beta-globin exon 2 only
289 training, promising results were limited to ASF and ATF primarily on 7q36.2 (including NOS3) in blac
290 lectin-3 mutant (R186S) that bound poorly to ASF but required much higher concentration ( approximate
292 -mRNA substrate in the presence of Tra2beta, ASF/SF2 and SRp40, whereas hnRNP A1 specifically inhibit
293 onic splicing enhancers, each containing two ASF/SF2 (alternative splicing factor/splicing factor 2)
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