ライフサイエンスコーパス: Actinobacteria

1 Mycobacterium tuberculosis (Mtb) and related actinobacteria.

2 genes analogous to those observed in related actinobacteria.

3 for the selective inhibition of archaea and actinobacteria.

4 GH51 in the genomes of eleven members of the actinobacteria.

5 Streptomyces, a related group of filamentous Actinobacteria.

6 hed for the related thiol (mycothiol) in the Actinobacteria.

7 HemQ from Bacillus subtilis and a number of Actinobacteria.

8 e closely related to elements found in other actinobacteria.

9 t role in the antibiotic resistance in other actinobacteria.

10 ranscription factor conserved in Proteo- and Actinobacteria.

11 on and modulating cell shape in pleiomorphic actinobacteria.

12 thermophilic soil bacterium that belongs to Actinobacteria.

13 eubacterial topoisomerases found largely in Actinobacteria.

14 pecies of proteobacteria, cyanobacteria, and actinobacteria.

15 y different numbers of homologous operons in Actinobacteria.

16 es have been predicted in proteobacteria and actinobacteria.

17 communities dominated by Proteobacteria and Actinobacteria.

18 onds to disulfide stress in the cytoplasm of Actinobacteria.

19 r of steroid responsiveness, correlated with Actinobacteria.

20 ry, along with higher relative abundances of Actinobacteria.

21 utes sequences and reducing the abundance of Actinobacteria.

22 n folding pathway may be a common feature in Actinobacteria.

23 d by Streptomyces coelicolor A3(2) and other actinobacteria.

24 cofactor found in methanogens and in various actinobacteria.

25 inated by Proteobacteria, Bacteroidetes, and Actinobacteria.

26 cholesterol and bile acids, respectively, in actinobacteria.

27 ine steric gates, in many taxa of the phylum Actinobacteria.

28 RbpA plays a key role in the sigma cycle in actinobacteria.

29 ntrast, Firmicutes (47% vs 63%, P = .17) and Actinobacteria (10% vs 14%, P = .36) were found more fre

30 99% +/- 0.29), Firmicutes (11.45% +/- 0.51), Actinobacteria (10.21% +/- 0.37) and Cyanobacteria (1.96

31 ed by their ecological roles in nature, make Actinobacteria a promising group for the bioenergy indus

32 In the actinobacteria, a class of muralytic enzymes - the 'resu

33 ces coelicolor is the model organism for the actinobacteria, a group of high-GC Gram-positive bacteri

34 ere we show that in Streptomyces, a genus of Actinobacteria abundant in soil and symbiotic niches, th

35 n the gut (gamma-Proteobacteria, Bacilli and Actinobacteria), all of which are predicted to participa

36 s subgroup, MtrB, is widely conserved in the actinobacteria, along with its presumed cognate response

37 nated by a core microbiome of taxa including Actinobacteria, Alpha-, Beta-, and Gammaproteobacteria,

38 t in a wide diversity of bacteria, including Actinobacteria, alpha-,beta-, and gamma-proteobacteria,

39 derate asthma were significantly enriched in Actinobacteria, although the largest differences observe

40 roidetes, and had relatively lower levels of Actinobacteria and Acidobacteria compared with bulk soil

41 re related to Cyanobacteria, Proteobacteria, Actinobacteria and Bacteriodetes previously identified i

42 esentatives of other mycolic acid containing actinobacteria and can thus be equated with the rank of

43 clades related to Bacteroidetes, Firmicutes, Actinobacteria and Chloroflexi were ubiquitously found i

44 onded positively to AMF, while taxa from the Actinobacteria and Comamonadaceae responded negatively t

45 sed growth form include hyphal tip growth in actinobacteria and filamentous fungi and pollen tube dev

46 Herein, we show that the Actinobacteria and Firmicutes (high-GC and low-GC Gram-p

47 proteobacteria, and Gram-positive bacteria (actinobacteria and firmicutes).

48 hich were highly abundant in Proteobacteria, Actinobacteria and Firmicutes, respectively.

49 tional orthologs of Rv2179c are prevalent in actinobacteria and found in bacteria as phylogenetically

50 fects were prominent in Acidobacteria, while Actinobacteria and Gammaroteobacteria communities were a

51 ta provide novel insight on cell division in actinobacteria and highlights a new class of potential d

52 yldiaminopimelate aminotransferase in tested actinobacteria and in the beta-proteobacterium Nitrosomo

53 pathway, MutS-MutL are absent in almost all Actinobacteria and many Archaea.

54 conserved in bacteria belonging to the phyla Actinobacteria and Nitrospira.

55 of spatial and temporal dynamics for SAR11, Actinobacteria and OCS116 in the North Atlantic by demon

56 cuss what is known about this pathway in the actinobacteria and offer insights into why an essential

57 phil recovery post-HCT, the presence of oral Actinobacteria and oral Firmicutes in stool was positive

58 lecular exchanges between termite-associated actinobacteria and pathogenic fungi, we uncovered a rema

59 Mycothiol (MSH) is the major thiol in Actinobacteria and plays a role analogous to that of glu

60 trait is widespread among soil bacteria with Actinobacteria and Proteobacteria, specifically Betaprot

61 dies, particularly in relative abundances of Actinobacteria and Proteobacteria.

62 I)(2)-NrdF, prototypical of the enzymes from actinobacteria and proteobacteria.

63 es from the phyla Bacteroidetes, Firmicutes, Actinobacteria and Proteobacteria.

64 ances in the phyla Fusobacteria, Firmicutes, Actinobacteria and Proteobacteria.

65 ty communities that are markedly enriched in Actinobacteria and specific families from other phyla, n

66 .e. fungi, Gram-positive bacteria (including actinobacteria) and Gram-negative bacteria] in temperate

67 se, 52 also lack homologs in closely related actinobacteria, and are termed "Frankia-specific." The g

68 ction is conserved in members of Firmicutes, Actinobacteria, and Deinococcus-Thermus, but not in Prot

69 for targeted protein degradation in archaea, Actinobacteria, and eukaryotes.

70 s, an overall increase in Proteobacteria and Actinobacteria, and reduced richness.

71 e revealed that at least some members of the Actinobacteria (another phylum of Gram-positive bacteria

72 sing Proteobacteria ( approximately 50%) and Actinobacteria ( approximately 30%), with lower abundanc

73 The actinomycetes, although not all the Actinobacteria, are easy to isolate from the marine envi

74 ria (beta-proteobateria), Bacteroidetes, and Actinobacteria as the main taxa despite the cyanobacteri

75 omologous ACAD gene pairs are found in other Actinobacteria, as well as Proteobacteria.

76 Actinobacteria, Bacilli, and many Gammaproteobacteria ta

77 assigned to the Proteobacteria, Firmicutes, Actinobacteria, Bacteroidetes, and Fusobacteria phyla.

78 n was more diverse, with lineages from OP11, Actinobacteria, Bacteroidetes, and Proteobacteria found

79 D includes 619 taxa in 13 phyla, as follows: Actinobacteria, Bacteroidetes, Chlamydiae, Chloroflexi,

80 microbiome was dominated by Proteobacteria, Actinobacteria, Bacteroidetes, Chloroflexi and many uncl

81 genomic analysis showed that Proteobacteria, Actinobacteria, Bacteroidetes, Cyanobacteria, and Firmic

82 y of a diverse group of taxa affiliated with Actinobacteria, Bacteroidetes, Firmicutes and Proteobact

83 tified, with most sequences belonging to the Actinobacteria, Bacteroidetes, Firmicutes and Proteobact

84 ree mice, using cultured commensals from the Actinobacteria, Bacteroidetes, Firmicutes, and Proteobac

85 This study focused on actinobacteria because they are keystone species in terr

86 oteobacteria, Bacteroidetes, Firmicutes, and Actinobacteria being most abundant.

87 a 3'-->5' exonuclease highly conserved among Actinobacteria, Beta-, Delta- and Gammaproteobacteria-as

88 pport the monophyly of the cyanobacteria and actinobacteria but not the proteobacteria, lending suppo

89 insights in the evolution of cell shapes in Actinobacteria, but also lead to medical interventions t

90 us to eukaryotic ubiquitination, proteins in actinobacteria can be post-translationally modified in a

91 fied in the phyla Firmicutes, Thermotogales, Actinobacteria, Chloroflexi, Deinococcus-Thermus, and Pr

92 onging to the Roseobacter, OCS116 and marine Actinobacteria clades were enriched in the eddy core and

93 asmatales and M. thermoautotrophicus, and in Actinobacteria compared to Halobacteriales.

94 acquired via horizontal transfer from marine Actinobacteria, conferring an adaptive advantage that mi

95 anisms and symbionts of herbivorous animals, Actinobacteria contribute to the global carbon cycle thr

96 s increased sharply, whereas Proteobacteria, Actinobacteria, Cyanobacteria and Acidobacteria decrease

97 d abundance in Verrocomicrobia but decreased Actinobacteria, Cyanobacteria, and Firmicutes as well as

98 obacteria, delta-Proteobacteria, Clostridia, Actinobacteria, Deinococcus-Thermus species and DNAs fro

99 g molecular techniques and metagenomics, and actinobacteria emerge as an often significant, sometimes

100 ioneuston) in these systems were depleted in Actinobacteria, enriched in either Betaproteobacteria or

101 ain HTCC2649 is a novel marine member of the Actinobacteria, family Intrasporangiaceae, and is closel

102 scovered sequences unique to clades, such as Actinobacteria, Firmicutes and gamma-Proteobacteria, and

103 nly occurred in the phyla of Proteobacteria, Actinobacteria, Firmicutes, and Cyanobacteria in bacteri

104 Three phyla (Actinobacteria, Firmicutes, and Proteobacteria) accounte

105 The main phyla in all samples were Actinobacteria, Firmicutes, and Proteobacteria.

106 istributed among species within the phyla of Actinobacteria, Firmicutes, and Proteobacteria.

107 Among the actinobacteria four Micrococcus species produced MSH, bu

108 the non-legume Parasponia (Cannabaceae), and actinobacteria Frankia, which are able to interact with

109 bacteria, alphabetagamma-Proteobacteria, and Actinobacteria (Frankia) and provide strong support for

110 bacterial phyla: Firmicutes, Proteobacteria, Actinobacteria, Fusobacterium, and Bacteroidetes, with t

111 Actinobacteria generate a large number of structurally d

112 In conclusion, intestinal Actinobacteria generate BH4.

113 NDPUMA in a systematic investigation of 7635 Actinobacteria genomes, suggesting that NRP chemical div

114 Cholesterol catabolism by actinobacteria has been extensively studied.

115 ividual phages infecting hosts in the phylum Actinobacteria have been sequenced and grouped into Clus

116 qlH lack a classical RecQ, though many other Actinobacteria have both RqlH and RecQ.

117 Small molecules produced by Actinobacteria have played a prominent role in both drug

118 narchaeota, but lower for Proteobacteria and Actinobacteria in highly contaminated samples.

119 the development of communities dominated by Actinobacteria including members of the genera Mycobacte

120 fferent phyla, being especially prevalent in Actinobacteria (including M. tuberculosis) and Proteobac

121 fferent phyla, being especially prevalent in Actinobacteria (including M. tuberculosis).

122 in the majority of bacterial species outside Actinobacteria, including Escherichia coli.

123 e holoenzyme and stimulates transcription in actinobacteria, including Streptomyces coelicolor and My

124 The ancient phylum Actinobacteria is composed of phylogenetically and physi

125 The culturability of several actinobacteria is controlled by resuscitation-promoting

126 rganisms is a monotopic membrane protein, in actinobacteria, it is a polytopic protein with three tra

127 nd in KEGG, from plants, fungi, metazoa, and actinobacteria; KEGG contains pathways not found in Meta

128 tage than that found in the genomes of other actinobacteria, legume endosymbionts, and plant pathogen

129 the DnaK sequences from Halobacteriales and Actinobacteria likely reflects common biases in their am

130 In contrast to most other actinobacteria, M. luteus encodes only one resuscitation

131 dates, and confirmation of indigenous marine actinobacteria, make exciting discoveries even more like

132 rature, and propose that LTA biosynthesis in Actinobacteria might be fundamentally different to that

133 tion experiments showed that three different Actinobacteria (Mycobacterium smegmatis, Streptomyces li

134 hed near the genic termini of the pathogenic Actinobacteria, Mycobacterium tuberculosis.

135 western and eastern regions of the gyre, and Actinobacteria, OCS116 and members of the Roseobacter li

136 ty structure varies across the gyre and that Actinobacteria, OCS116, and members of the Roseobacter c

137 We identified shifts in SAR11, Actinobacteria, OCS116, SAR86, SAR116 and members of the

138 eriaceae; ammonium enriched for oligotrophic Actinobacteria OM1 and Gammaproteobacteria KI89A clades

139 er Symbiobacterium thermophilum belongs with Actinobacteria or Firmicutes.

140 Actinobacteria OTUs showed particularly strong correlati

141 ad more sequences in Firmicutes and fewer in Actinobacteria phyla and more sequences in the genera Ba

142 tolerant organisms of the Proteobacteria and Actinobacteria phyla associated with rectal mucosa, comp

143 followed by Firmicutes, Proteobacteria, and Actinobacteria phyla.

144 oups/species belonging to Proteobacteria and Actinobacteria phyla; however, similar to abiotic foulan

145 am negative Proteobacteria and gram positive Actinobacteria phyla; the bacterial genera that showed t

146 TPS-2-producing bacteria as belonging to the Actinobacteria phylum.

147 mbers of six phyla, Firmicutes, Bacteroides, Actinobacteria, Proteobacteria, Fusobacteria, and TM7, w

148 Here we provide evidence that, in Actinobacteria, pupylation plays a crucial role in this

149 However, examination of Firmicutes and Actinobacteria reveals that PspA orthologs associate wit

150 etes rhodopsins were the most abundant while Actinobacteria rhodopsins, or actinorhodopsins, were com

151 s one of the smallest genomes of free-living actinobacteria sequenced to date, comprising a single ci

152 Streptomyces and Mycobacterium of the phylum Actinobacteria show no sign of similarity.

153 verification successfully identified several actinobacteria species which were not previously known t

154 Actinobacteria spp. exhibited trends with treatment.

155 etermine the more flexible rod-like shape in actinobacteria such as Mycobacterium species are unknown

156 us with Thermotoga, and Halobacteriales with Actinobacteria, suggesting that the three archaeal types

157 ly of the cyanobacteria, proteobacteria, and actinobacteria, supporting vertical descent.

158 ases of Mycobacterium, a genus of the phylum Actinobacteria that includes the human pathogen Mycobact

159 compounds, primarily from cyanobacteria and actinobacteria, that illustrate the tremendous potential

160 cteroidetes, Firmicutes, Proteobacteria, and Actinobacteria, the four most common phyla of gut bacter

161 Among Actinobacteria, the four-gene module occurred only in tu

162 rase present in Mycobacteriaceae and related Actinobacteria, this subfamily of type IA topoisomerase

163 t that land plant TAL genes are derived from Actinobacteria through an ancient horizontal gene transf

164 pression of an eight-gene operon encoding an actinobacteria-type H2-uptake [NiFe]-hydrogenase.

165 Our results reveal the structure of an Actinobacteria-unique insert of the RNAP beta' subunit.

166 In contrast, aerobic actinobacteria utilize systems comprised of independentl

167 10 major subclades within the Flavobacteria, Actinobacteria, Verrucomicrobia and Proteobacteria (incl

168 r sequences found in organisms of the phylum Actinobacteria was investigated.

169 In addition, Firmicutes and Actinobacteria were also the abundant phyla in the given

170 Heterotrophic Proteobacteria and Actinobacteria were isolated from Lake Matano, Indonesia

171 s belonging to Firmicutes, Bacteroidetes and Actinobacteria were present in the copepod guts througho

172 Recently, these actinobacteria were shown to harbor self-resistance prop

173 Compared to CTRLs, in NAFLD patients Actinobacteria were significantly increased and Bacteroi

174 ortunistic pathogens from the Firmicutes and Actinobacteria, which exhibit a Gram-positive type of ce

175 cases of Mycobacteria, a genus of the phylum Actinobacteria, which includes the human pathogen Mycoba

176 for lipid aminoacylation, conserved in many Actinobacteria, which results in formation of Ala-PG and

177 This enzyme is a large monomer in actinobacteria, while it is constituted of two subunits

178 Spearman's analysis negatively correlated Actinobacteria with cecal cholesterol, intestinal and pl

179 nalysis of nucleic acid sequences placed the actinobacteria within the proteobacteria, supporting lat

180 Some analyses place the cyanobacteria and actinobacteria within the proteobacteria, which suggests