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1 Apaf-1 also was found to colocalize with huntingtin-cont
2 Apaf-1 and ATP were required to initiate apoptosis upon
3 Apaf-1 and X-linked inhibitor of apoptosis protein (Xiap
4 Apaf-1 binds to and hydrolyses ATP/dATP and their analog
5 Apaf-1 contains a dATP as a cofactor.
6 Apaf-1 deficiency may constitute a significant mode of r
7 Apaf-1 DNA methylation was demonstrated in acute myeloid
8 Apaf-1 exists in normal cells as an autoinhibited monome
9 Apaf-1 facilitates the proteolytic activation of procasp
10 Apaf-1 is also expressed in all neuroblastoma tumor cell
11 Apaf-1 localizes exclusively in the cytosol and, upon ap
12 Apaf-1 oligomerizes to produce approximately 1.4-MDa and
13 Apaf-1 plays an essential role in apoptosis.
14 Apaf-1 protein content in the soleus of TR animals was l
15 Apaf-1 protein deficiency occurs in human leukaemic blas
16 Apaf-1 protein expression did not correlate with Apaf-1
17 Apaf-1, which interacts with cytochrome c and activates
18 Apaf-1-mediated activation of caspase-9 and caspase-3 wa
19 Apaf-1-negative melanomas are invariably chemoresistant
20 The apoptotic protease-activating factor 1 (Apaf-1) controls caspase activation downstream of mitoch
21 The apoptotic protease-activating factor 1 (Apaf-1) controls the onset of many known forms of intrin
22 the apoptotic protease-activating factor 1 (Apaf-1)-dependent apoptotic pathway in human NSCLC cells
23 rial apoptotic protease-activating factor 1 (Apaf-1)-dependent pathway for apoptosis (as type II cell
24 n of apoptotic protease activating factor-1 (Apaf-1) is a key step in the mitochondrial-signaling pat
25 e to apoptotic protease activating factor-1 (Apaf-1) knockout mice, we have investigated the possibil
26 n of apoptotic protease-activating factor-1 (Apaf-1) protein and reduction of X-chromosome-linked inh
27 e c, apoptosis protease-activating factor-1 (Apaf-1), and caspase-9, or a caspase-independent mechani
28 bind apoptotic protease activating factor-1 (Apaf-1), which in turn binds caspase-9 both activating t
32 (apoptosis) and on survival pathways (Bcl-2, Apaf-1, AKT, NF-kappaB) involved in multidrug resistance
40 ses are under positive control via the CED-4/Apaf-1/Dark adaptors and negative control via IAPs (inhi
41 inhibition or genetic deletion of caspase-9, Apaf-1, or caspase-3/7 causes dying cells to secrete IFN
44 function mutation in ced-4, which encodes an Apaf-1 homolog that promotes programmed cell death by ac
47 eal arch mesenchyme leads to apoptosis in an Apaf-1-dependent fashion and that, while loss of aortic
48 down the expression of c-Myc, caspase-2, and Apaf-1, an activating component in the apoptosome, in tw
50 been suggested for caspase-8, caspase-9 and Apaf-1 in controlling tumor development and their sensit
53 ntly lower (P < 0.01), and levels of Bax and Apaf-1 were elevated (P < 0.02) in ER carcinomas versus
56 of postmitotic neurons in which caspases and Apaf-1 are present and functional because quantitatively
57 revious studies have shown that caspases and Apaf-1 are required for the normal programmed cell death
58 type 1 apoptotic pathway (i.e., caspases and Apaf-1) are perturbed in vivo, developing postmitotic ne
60 lation between Apaf-1 protein expression and Apaf-1 mRNA levels after the demethylation treatment.
62 nerated mouse embryos lacking both HAND2 and Apaf-1, a central downstream mediator of mitochondrial d
64 nes such as caspase 3, caspase 7, PARP1, and Apaf-1 and activates their expression after DNA damage.
65 bcl), a mitochondria-associated protein, and Apaf-1 (dark), which links mitochondrial signaling with
67 thologues of the apoptosome components, Ark (Apaf-1) and Dronc (caspase-9), are also required for the
68 oned a novel rat gene product, designated as Apaf-1-interacting protein (AIP), which functions as a d
70 Structural comparison with autoinhibited Apaf-1 revealed how dATP binding triggers a set of confo
73 promoting the formation of a complex between Apaf-1 and caspase-9 in a caspase-activating structure k
77 ons that inactivate the interactions between Apaf-1 CARD and the prodomain of caspase-9 also abolishe
78 protein expression of Bcl-2, Bax, Bim, Bid, Apaf-1, and caspase-9 in activated CD4(+) T cells--compo
79 we show that the NB-ARC (nucleotide-binding, Apaf-1, R-proteins, and CED-4) domain of the Rx1 NLR of
81 ere we show that apocytochrome c still binds Apaf-1 and that it can block holo-dependent caspase acti
83 mitochondrial apoptotic pathway mediated by Apaf-1 is an integral part of ER stress-induced apoptosi
85 ions support a model in which recruitment by Apaf-1 creates high local concentrations of caspase 9 to
86 ivated in the mitochondria in a cytochrome c/Apaf-1-dependent manner, or activated caspase-9 and -3 m
88 e demonstrate that tango7, not the canonical Apaf-1-adaptor dark, regulates dronc activity at the cor
89 irst, in addition to a typical CARD-carrying Apaf-1 homologue, sea urchins have at least two novel Ap
90 erein MAPK signalling promotes Rsk-catalysed Apaf-1 phosphorylation and consequent binding of 14-3-3v
91 AP-ATPases (animal apoptosis regulators CED4/Apaf-1, plant disease resistance proteins, and bacterial
94 ptional suppression of apoptosome components Apaf-1 and procaspase-9, and limiting caspase-9 activity
95 ptosome is a multiprotein complex comprising Apaf-1, cytochrome c, and caspase-9 that functions to ac
99 HD brain, suggesting a common role for Dark/Apaf-1 in polyglutamine pathogenesis in invertebrates, m
100 In the presence of cytochrome c and dATP, Apaf-1 assembles into an oligomeric apoptosome, which is
102 stal structure of an ADP-bound, WD40-deleted Apaf-1, which reveals the molecular mechanism by which A
106 sembly of a heptameric complex in which each Apaf-1 subunit is bound noncovalently to a procaspase-9
107 transcriptomics databases indicated elevated Apaf-1 expression in several hematologic malignancies, i
108 in the cell death-associated genes encoding Apaf-1, caspase-3, and caspase-9, which suggests that ph
110 Bcr-Abl prevented interaction of endogenous Apaf-1 with the recombinant prodomain of caspase 9, it d
113 ion of apoptotic protease-activating factor (Apaf-1) expression that in turn induced activation of nu
114 e-9 by apoptotic protease-activating factor (Apaf-1) in an oligomeric complex known as the apoptosome
118 itochondria following heat shock, functional Apaf-1.caspase-9 apoptosome complexes were not formed, a
120 In contrast to HAND2-/- embryos, HAND2-/-Apaf-1-/- embryos at E10.5-11.0 had well-developed phary
121 nalysis through pharyngeal arches of HAND2-/-Apaf-1-/- embryos revealed decreased apoptosis and the e
123 tivity to cytochrome c is attributed to high Apaf-1 levels in the tumor tissue compared with low Apaf
126 accharomyces cerevisiae overexpressing human Apaf-1 and procaspase-9, critical components of the apop
129 uced Apaf-1 levels and that this decrease in Apaf-1 is directly linked to the tight regulation of cas
133 d via its small subunit to the NOD domain in Apaf-1, resulting in the formation of a heterodimer that
134 also accompanied with a marked reduction in Apaf-1, resulting in a significant decrease in apoptosom
136 oreover, the N-terminal CARD in the inactive Apaf-1 monomer is not shielded from other proteins by be
138 y, we find that E2F1 is sufficient to induce Apaf-1 expression in developing but not mature neurons.
139 This differential capacity of E2F1 to induce Apaf-1 transcription is because of the association of th
142 tivation in native lysates and also inhibits Apaf-1 oligomerization into an apoptosome complex in a p
145 on of endogenous caspase 9 with the isolated Apaf-1 caspase recruitment domain (CARD) or Apaf-1 lacki
148 ome using a crystal structure of full length Apaf-1 and a single particle, electron density map at ~9
151 we show that metastatic melanomas often lose Apaf-1, a cell-death effector that acts with cytochrome
153 ed neuronal apoptosis was reduced with lower Apaf-1 expression, and little NF-kappaB activation was f
154 vation was found in the neurons with mutated Apaf-1 or a deletion of TNFRI compared with the cells fr
157 mologue, sea urchins have at least two novel Apaf-1-like proteins that are each linked to a death dom
164 cytochrome c releases the autoinhibition of Apaf-1 through specific interactions with the WD40 repea
166 uilibrium and kinetic folding of the CARD of Apaf-1 (apoptotic protease activating factor 1), which c
170 ressing Bcl-2/Bcl-x(L) or stably depleted of Apaf-1 were completely resistant to heat-induced apoptos
171 ressing Bcl-2/Bcl-x(L) or stably depleted of Apaf-1 were equally resistant to apoptosis induced by th
176 eptibility associated with downregulation of Apaf-1 expression as a function of developmental age was
177 ults suggest that differential expression of Apaf-1 and caspase-3 genes may underlie regulation of ap
179 Our results suggest that the expression of Apaf-1 may be predictive of the response to proteasome i
181 m is not adequate to describe the folding of Apaf-1 CARD at either pH, suggesting the presence of int
182 raising the possibility that the function of Apaf-1 is not only to oligomerize procaspase-9 but also
187 V-light was increased; involved induction of Apaf-1, activation of caspase-3, and was dependent on p5
190 e-dependent increase in the protein level of Apaf-1 in wild-type, Bax-/-, and Bak-/- MEFs but not in
192 that it is crucial to evaluate the levels of Apaf-1 and XIAP proteins in patient samples before using
195 r the caspase inhibitor zVAD-fmk nor loss of Apaf-1 affected the efflux of cytochrome c, Smac/Diablo
198 ls, is assembled by rapid oligomerization of Apaf-1 and followed by a slower process of procaspase-9
205 formed a stable association with oligomeric Apaf-1 in a approximately 1.4-2.0 mDa pre-apoptosome com
207 to detect early-stages of apoptosis based on Apaf-1 oligomerization and apoptosome formation using th
208 ogether to accelerate nucleotide exchange on Apaf-1 and prevent inactive Apaf-1/cytochrome c aggregat
211 xpression of endogenous c-Myc, caspase-2, or Apaf-1 is reduced 80-90%, cisplatin (or etoposide)-induc
219 tified and a number of these, including p53, Apaf-1, and members of the inhibitor of apoptosis protei
221 se-3 activation pathway using purified ProT, Apaf-1, procaspase-9, procaspase-3, Hsp70, cytochrome c,
223 comprises 16 molecules of the Dark protein (Apaf-1 ortholog), reveals molecular determinants that su
224 regard to the apoptosis signaling proteins, Apaf-1 and Nod1, which share domain arrangements similar
227 on of this pathway with purified recombinant Apaf-1, procaspase-9, procaspase-3, and cytochrome c fro
228 osome reconstitution system with recombinant Apaf-1 and cytochrome c, K(+) also inhibits caspase acti
229 yocytes, like neurons, have markedly reduced Apaf-1 levels and that this decrease in Apaf-1 is direct
230 c factors related to the apoptosis regulator Apaf-1 and a class of plant disease resistance proteins.
232 fter DNA damage, mature neurons resynthesize Apaf-1 through the cell cycle-related E2F1 pathway and r
236 itochondria during cytotoxic stress and that Apaf-1 is only required following cytochrome c release t
237 enhanced in this complex, demonstrating that Apaf-1 CARD allosterically up-regulates caspase-9 activi
238 f Molecular Cell, Zermati et al. report that Apaf-1 is essential for the DNA damage-induced intra-S p
239 reverse transcription-PCR analysis show that Apaf-1 mRNA is aberrantly processed, resulting in greatl
240 tial mixing stopped-flow studies showed that Apaf-1 CARD folds and unfolds rapidly and suggest a fold
247 or unprocessed caspase-9 initially binds the Apaf-1 apoptosome in cytochrome c/dATP-activated lysates
249 the initiator caspase-9 is activated by the Apaf-1 apoptosome and must remain bound to retain signif
251 me activity, retains the ability to form the Apaf-1 oligomer; however, there is a diminished amount o
256 nd apoptosis, and suggest that levels of the Apaf-1 and XIAP proteins, but not mitochondrial depolari
258 ription is because of the association of the Apaf-1 promoter with active chromatin in developing neur
260 ults suggest that molecular targeting of the Apaf-1-caspase-9 signaling pathway may be a feasible neu
265 y consists of some 25 members related to the Apaf-1/Ced-4 family of apoptosis regulators and certain
267 wever, after transient transfection with the Apaf-1 gene, K/Bax cells were sensitized to etoposide-in
271 mode of apoptotic regulation exerted through Apaf-1 phosphorylation by the 90-kDa ribosomal S6 kinase
272 h requires concurrent positive input through Apaf-1-like proteins together with disruption of IAP-cas
274 n healthy and chronic periodontitis tissues (Apaf-1, 19.2-fold; caspase-9, 14.5-fold; caspase-3, 6.8-
276 l types promoted 14-3-3varepsilon binding to Apaf-1 and rendered the cells insensitive to cytochrome
278 of cytochrome c (CytC), dATP or ATP binds to Apaf-1 and triggers heptamerization of Apaf-1 leading to
279 m mitochondria to cytosol, where it binds to Apaf-1 to form a procaspase-9-activating heptameric prot
281 heat shock enhanced the binding of HSP70 to Apaf-1, which is likely to interfere in stress-mediated
283 some inhibitor, Hsp90beta, bound strongly to Apaf-1, preventing cytochrome c-induced Apaf-1 oligomeri
286 ich reveals the molecular mechanism by which Apaf-1 exists in an inactive state before ATP binding.
287 itotic neuronal populations in mice in which Apaf-1 has been genetically deleted and find that they e
288 of Bax or by coexpression of caspase 9 with Apaf-1, and preincubation of cytosolic extracts with ILP
291 e that oxidant-activated JNK associates with Apaf-1 and cytochrome c in a catalytically inactive comp
298 nding prevents cytochrome c interaction with Apaf-1, blocking Apaf-1 oligomerization and caspase acti
300 elease of cytochrome c, which interacts with Apaf-1 to trigger caspase activation and apoptosis.
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