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1 CDR formation appears as a fast redistribution of connex
2 CDR formation does not depend on membrane trafficking or
3 CDR formation may reflect lipid-phase separation events
4 CDR was determined from stereoscopic photographs by two
5 CDR was significantly higher in patients screened with D
6 CDRs predicted to bind the minimal FLAG peptide (Asp-Tyr
7 CDRs represent a unique type of structure that forms tra
8 CDRs were calculated.
9 hild), CDR 2+ ($11.20); the CDR 3+ ($13.00); CDR 2+, culture CDR negatives ($16.42); CDR 3+, culture
11 (3) clinical decision rule (CDR) score >/=2 (CDR 2+); (4) CDR score >/=3 (CDR 3+); (5) treating those
12 re we show that MYBL2, a gene within the 20q CDR, is expressed at sharply reduced levels in CD34+ cel
13 DR) score >/=2 (CDR 2+); (4) CDR score >/=3 (CDR 3+); (5) treating those with a CDR score >/=2 plus t
14 decision rule (CDR) score >/=2 (CDR 2+); (4) CDR score >/=3 (CDR 3+); (5) treating those with a CDR s
15 00); CDR 2+, culture CDR negatives ($16.42); CDR 3+, culture CDR negatives ($23.89); and culture all
16 f-score: 0.807) and chemicals (BioCreative 5 CDR corpus, NER f-score: 0.914, normalization f-score 0.
17 scanning reveal that the majority of the 52 CDR residues are utilized differently for the two antige
20 R, 9-24) observed in countries (N=48) with a CDR ranging from greater than 7.2% but less than or equa
21 ore >/=3 (CDR 3+); (5) treating those with a CDR score >/=2 plus those with CDR score <2 and positive
22 re CDR negatives); (6) treating those with a CDR score >/=3 plus those with CDR score <3 and positive
23 resulting CDR3-grafted HC was paired with a CDR-grafted light chain, displayed on the surface of HEK
25 omatic (CDR = 0.5), and 33 overtly affected (CDR > 0.5) autosomal dominant Alzheimer's disease mutati
26 tical mediators of specificity and affinity, CDRs may also be the primary drivers of biotherapeutic d
28 r that provides access to assignments of all CDR structures in the PDB to our classification system.
29 in the VL domain are likely to stabilize all CDR loops in the VH domain, and, when these residues are
30 e entropy loss of only the CDR3, but not all CDRs, correlated significantly with the kinetic and affi
31 6 points [95% CI, 0.32-0.80]; P < .001), and CDR-Sum of Boxes (mean difference, 0.23 points [95% CI,
32 39), FPR false-positive rate (P = .004), and CDR cancer detection rate (P < .001) of screening mammog
33 es in FPR false-positive rate (P = .011) and CDR cancer detection rate (P = .001) and a nonsignifican
35 ically rigidified, whereas the VL domain and CDR L2 loop become more flexible during affinity maturat
37 showed that both Valpha/Vbeta interface and CDR residues were important in maintaining binding to MA
38 r FPR false-positive rate , sensitivity, and CDR cancer detection rate at all annual interpretive vol
39 s in SMA clustered around the N-terminus and CDR loops experience considerable conformational exchang
40 inear relationship between RGC estimates and CDRs indicated that eyes with a large CDR would require
41 ulation of SHM in both framework regions and CDRs contributed to the clonal affinity and antigenicity
44 rived from rare precursors with long anionic CDR H3s that are often deleted in the B cell repertoire.
45 demonstrated that functional human antibody CDR fusions can be efficiently engineered by grafting th
46 reviously performed a clustering of antibody CDR conformations and defined a systematic nomenclature
47 e results illustrate the utility of antibody CDR fusions as a general and effective strategy to gener
48 e results illustrate the utility of antibody CDR fusions as a general and versatile strategy for gene
49 sisting of quinine and reconfigured antibody CDR plays a critical role in recognition of its target e
50 onstrate that arginine mutations in antibody CDRs display context-dependent impacts on specificity an
51 ion involves binding of the drug to antibody CDRs, causing it to acquire specificity for a site on a
54 r specificity were also enriched in arginine CDR mutations, but these antibodies possessed significan
58 here we used single-codon libraries of both CDR and non-CDR residues to generate a deep mutational s
60 nts), Clinical Dementia Rating Sum of Boxes (CDR-Sum of Boxes; 0 [best] to 18 [worst] points), and Lo
61 imal geometric orientations, one achieved by CDR H3 ontogenies and the other achieved by VH-gene-rest
63 ctions were influenced most by the VHH CDR3 (CDR, complementarity-determining region) elements, with
64 ieved through mutations in the third H chain CDR (HCDR3) that conferred a markedly faster on-rate and
65 designed heavy and light or just heavy chain CDRs were synthesized and screened for peptide binding b
66 s recognition of the Fab HM14c10 light chain CDRs.IMPORTANCE A chimeric yellow fever-dengue live-atte
67 especially concerning for positively charged CDR mutations that are linked to antibody polyspecificit
68 west cost were treat all ($11.19 per child), CDR 2+ ($11.20); the CDR 3+ ($13.00); CDR 2+, culture CD
69 ased use of alleles that encode the critical CDR-H2 Phe54 (F-alleles) to make broadly neutralizing an
70 11.20); the CDR 3+ ($13.00); CDR 2+, culture CDR negatives ($16.42); CDR 3+, culture CDR negatives ($
71 re <2 and positive cultures (CDR 2+, culture CDR negatives); (6) treating those with a CDR score >/=3
74 ose with CDR score <2 and positive cultures (CDR 2+, culture CDR negatives); (6) treating those with
78 tions but also mutation pairs from different CDRs that synergistically improve both binding functions
79 n and Vm24-toxin were grafted into different CDRs of the humanized antibodies BVK and Synagis (Syn) u
82 teractions, and it is unclear to what extent CDRs can accumulate charged residues to increase antibod
85 e was 0.00 (2.60); for MMSE, 29.0 (1.2); for CDR-Sum of Boxes, 0.04 (0.14); and for Logical Memory De
87 trended toward significance, especially for CDRs, but cannot fully explain the observed changes in e
90 ction and antigen recognition where germline CDR loop structure has been modified by multiple glycine
91 CDR and noted possible evidence of glaucoma (CDR >/= 0.7 or the presence of a notch or disc hemorrhag
92 oral epigenetic alterations in hematopoietic CDRs points to sets of genes that are tightly regulated
94 we then generated a bi-functional Herceptin-CDR fusion protein in which both hEPO and hGCSF were gra
96 r if affinity mutations in the hypervariable CDRs generally impact antibody stability and to what ext
97 nd molecular dynamics simulations identified CDR residues that were predicted to be important in the
106 residues in variable domains, especially in CDRs (complementarity determining regions) of an antibod
108 howed lower cognitive performance, increased CDR-SOB, higher amyloid burden and worse clinical progre
109 sion DBT plus synthetic 2D imaging increases CDRs with recall rates comparable to those of FFDM.
110 false-positive (FP) recalls, and incremental CDR for each modality; these were compared using McNemar
111 : 13 tomosynthesis-detected BCs (incremental CDR, 4.0 per 1,000 screens; 95% CI, 1.8 to 6.2) versus 2
112 rsus 23 ultrasound-detected BCs (incremental CDR, 7.1 per 1,000 screens; 95% CI, 4.2 to 10.0), P = .0
116 yers through two hydrophobic residues in its CDR H3 (third heavy-chain complementarity-determining re
117 MHC surface, with the receptor utilizing its CDR loops in a cooperative fashion such that specificity
118 es and CDRs indicated that eyes with a large CDR would require loss of large RGC numbers for a small
120 ugh initial selection of B cells with a long CDR H3, and limited subsequent somatic hypermutation.
122 ows are unusual in having exceptionally long CDR H3 loops and few V regions, but the mechanism for cr
124 al and neonatal deaths if countries with low CDR increased their rates to a range of greater than 7.2
125 ing caesarean delivery in countries with low CDRs could avert as many as 163 513 maternal deaths and
127 his model assumes that if countries with low CDRs increased their rates of caesarean delivery to grea
131 found that the proline at position 41, a non-CDR residue in heavy chain variable regions (VH), is imp
132 d single-codon libraries of both CDR and non-CDR residues to generate a deep mutational scan of a hum
133 insertion of a full-length protein into non-CDR loops of antibodies provides a feasible approach to
134 sors (CDR score, >/=0.5) and nonprogressors (CDR score, 0) and between APOE epsilon4 carriers and non
135 chain 1 in contrast to the commonly observed CDR heavy chain 3, providing a unique perspective into a
136 omass, BEBCS may allow earlier deployment of CDR at lower carbon prices when long-term improvements i
138 ctor, Trio, play a role in the regulation of CDR dynamics, particularly by modulating their size.
140 g and solubility to residues at the edges of CDRs, and provide guidelines for designing other grafted
141 t restrict the conformational flexibility of CDRs and enhance the kinetics and affinity of immunoglob
143 8852 binds through a coordinated movement of CDRs to a highly conserved epitope encompassing a hydrop
144 l a novel role for RhoG in the regulation of CDRs and the cellular processes associated with their fo
146 M2A rescued the effect of ASAP1 knockdown on CDRs but ASAP1 did not rescue NM2A knockdown defect in C
150 t a similar strategy can be applied to other CDRs and show that a CDRH2-peptide fusion binds CXCR4 wi
151 The CFI scores between clinical progressors (CDR score, >/=0.5) and nonprogressors (CDR score, 0) and
152 n applied to a benchmark set of high-quality CDR H3 loops, the average minimum root mean square devia
155 per 1000 screens, or cancer detection rate (CDR), 5.1 (95% CI: 5.0, 5.2); sensitivity, 86.9% (95% CI
157 mography recall rate, cancer detection rate (CDR), and positive predictive values (PPVs) for digital
158 ome measures included cancer detection rate (CDR), number of false-positive (FP) recalls, and increme
159 edition and included cancer detection rate (CDR), positive predictive value of biopsy recommendation
160 to a country-level caesarean delivery rate (CDRs) of roughly 19.0%, cesarean delivery rates and mate
164 stigated using the Clinical Dementia Rating (CDR) and the Informant Questionnaire on Cognitive Declin
165 ognitively normal (Clinical Dementia Rating [CDR] of 0) middle-aged research volunteers (n = 169) enr
166 ively normal (CN) (Clinical Dementia Rating [CDR] score, 0) or had AD dementia (CDR score, >0) were i
168 48 participants with initial cup-disc ratio (CDR) of 0.6 or greater and 423 images of 360 eyes of 180
169 In the POAG group, optic cup-to-disc ratio (CDR) was positively correlated with deep white matter hy
174 vy chain complementarity-determining region (CDR) 3 grafting combined with somatic hypermutation in v
175 fine the complementarity determining region (CDR) 3alpha and CDR3beta regions of individual T-cell re
177 de novo complementarity determining region (CDR) design to engineer targeted antibody-antigen intera
180 ng loop (complementarity-determining region (CDR) H3) characteristic of this category of antibodies.
184 ns using complementarity-determining region (CDR) loops that are either germ line-encoded (CDR1 and C
185 ning all complementarity-determining region (CDR) loops, as well as sulfatide recognition separately
188 of the two complementary determining region (CDR) methionine residues had little or no impact on anti
190 ltralong complementarity-determining region (CDR), we have developed a versatile approach for generat
192 B4 using complementarity-determining region (CDR)-restricted mutagenesis and tailored selection and s
194 tations in complementary determining region (CDR)1 and CDR2 coincided with a combination of overlappi
195 in third complementarity-determining region (CDR-H3) antibodies in the antigen-experienced repertoire
196 in third complementarity-determining region (CDR-L3) amino acid sequences and/or Vkappa,lambda-Jkappa
200 ms) formation of connexin-depleted regions (CDRs) inside GJ plaques between cells exposed to AB5 tox
201 entify 32,662 chromatin determinant regions (CDRs), genomic regions with different epigenetic charact
203 l three complementarity-determining regions (CDRs) and also within framework 3, and thus, VH-B1a and
204 in the complementarity-determining regions (CDRs) are especially important because they can impair t
205 n their complementarity-determining regions (CDRs) during affinity maturation to enhance electrostati
206 lobulin complementarity-determining regions (CDRs) from the crystal structures of 34 low-affinity T-c
208 of the complementarity determining regions (CDRs) of antibodies is critically important for antibody
209 y short complementarity determining regions (CDRs) of high diversity adjacent to framework regions sh
210 y-chain complementarity determining regions (CDRs) of single-chain antibody (scAb) fragments is demon
212 nges in complementarity-determining regions (CDRs) of the TCR seen in comparison of unliganded and bo
213 to the complementarity-determining regions (CDRs) of these antibodies and define in crystal structur
215 vity of complementarity-determining regions (CDRs) via Sap9-produced large proteolytic peptides (3.4
216 n their complementarity-determining regions (CDRs) without compromising thermodynamic stability is cr
217 in the complementarity determining regions (CDRs), can result in the production of an antibody with
218 of the complementarity determining regions (CDRs), which are most significant for functional selecti
219 tacting complementarity-determining regions (CDRs), with CDR1 and CDR2 encoded by the V segment and C
223 heavy chain complementarity domain regions (CDRs) of HM14c10, while fewer interactions are observed
225 ertainty, antibody-antigen docking resamples CDR loop conformations and can use multiple models to re
226 18 months using the Cognitive Drug Research (CDR) and Cambridge Neuropsychological Test Automated Bat
227 weeks 30-38 post-infection with a 35-residue CDR H3, and neutralized the virus that superinfected thi
230 e (culture all); (3) clinical decision rule (CDR) score >/=2 (CDR 2+); (4) CDR score >/=3 (CDR 3+); (
232 individuals (Clinical Dementia Rating scale [CDR] global scores of 0, above cutoff on the modified Mi
235 improved by taking into account simultaneous CDR loops conformation and VH/VL orientation optimisatio
237 throughout the framework and in four of six CDRs in one design and atomic accuracy in the entire Fv
238 key immune host species, binary substitution CDR cassettes were inserted into preferred human framewo
239 ymptomatic (CDR = 0), 25 mildly symptomatic (CDR = 0.5), and 33 overtly affected (CDR > 0.5) autosoma
241 anel on Climate Change scenarios assume that CDR within the energy sector would be delivered using bi
246 all ($11.19 per child), CDR 2+ ($11.20); the CDR 3+ ($13.00); CDR 2+, culture CDR negatives ($16.42);
248 b showed that deamidation of the drug at the CDR leads to a loss of recognition by the antibodies use
249 on all three monoclonal antibodies to be the CDR H3 loop of the Fab region, and show that they all ha
250 and, when these residues are not buried, the CDR loops in the VL domain are also likely to be stabili
252 disc photograph were 1.6% (3 of 180) in the CDR less than 0.6 group and 31.4% (172 of 548) in the CD
255 gA 5I2 is the predominant involvement of the CDR light chain 1 in contrast to the commonly observed C
258 a systematic nomenclature consisting of the CDR, length and an integer starting from the largest to
259 his work demonstrates the versatility of the CDR-fusion strategy for generating functional human anti
261 lay an essential role beyond scaffolding the CDR loops and their unusual contribution to potency and
263 , HDX-MS and SPR analysis confirmed that the CDR regions of VHH6 interact simultaneously with IL-6 an
264 of culturing all children compared with the CDR 2+ strategy costs more than $125 000/quality-adjuste
266 stulated to establish weak contacts with the CDR-H3 loop of the antibody, which are believed to be cr
267 y specific chemical modifications within the CDR, hydrogen-deuterium exchange mass spectrometry (HDX
268 the frameworks is to human germlines and the CDRs to the germlines of mice or other species sources.
269 the most common degradation pathways in the CDRs of a mAb and identified correlations between chemic
273 ion, some of the overlapping hotspots in the CDRs were at sites in which replacement mutations could
278 ions in the most hydrophobic portions of the CDRs, whereas the less specific antibodies contained arg
285 toire displayed unique features in the third CDR of Ig H chains with minor alterations along the immu
287 h antigen-binding sites built from the three CDR loops and, also, nonconventional libraries with anti
289 rine antibody, we modified MMGZ01 Fv through CDR grafting and the reconstructed antibody (H3L2) maint
290 -SEE IgEs as conventional antibodies through CDRs or simultaneously as conventional antibodies and as
291 antibodies and as "superantibodies" through CDRs and framework regions to SEEs in SEE-anti-SEE IgE-F
294 ng as antigens in the conventional manner to CDRs and as superantigens to framework regions of anti-S
295 receptor (IL-6R) by using side chains of two CDR residues filling the site I cavities of IL-6, thus m
296 es (3.4 kDa on average) containing up to two CDRs per peptide; (iii) reduced artifact introduction du
298 an antibody repertoire composed of ultralong CDR H3s that fold into a diversity of minidomains genera
300 tionship between estimated RGCs and vertical CDR was best represented using a third degree polynomial
302 ive selection of somatic mutations in the VH CDR and altered VH CDR3 physicochemical properties.
303 le in the cellular functions associated with CDR formation, including macropinocytosis, receptor inte
304 y Rac1 has been consistently associated with CDR formation, whereas the role of other GTPases in this
305 3 and 2012, respectively, for countries with CDR 7.2% or less (N=45) with available data from the Wor
306 -protein interaction, hotspots grafting with CDR loop swapping is an attractive route to the rational
307 those with a CDR score >/=2 plus those with CDR score <2 and positive cultures (CDR 2+, culture CDR
308 those with a CDR score >/=3 plus those with CDR score <3 and positive cultures (CDR 3+, culture CDR
309 rcentiles observed for countries (N=48) with CDRs ranging from greater than 7.2% but less than or equ
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