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1 and non-physiological barriers (for example, DNA adducts).
2 l II) stalled at a monofunctional pyriplatin-DNA adduct.
3 e is located to the 5' side of the cisplatin-DNA adduct.
4 oxyguanosine (N(2)-CEdG) as the major stable DNA adduct.
5 derstanding the human health consequences of DNA adducts.
6 nd repair, it is necessary to be able to map DNA adducts.
7 for the screening for both known and unknown DNA adducts.
8 in a manner distinct from that of cisplatin-DNA adducts.
9 e content, lipid peroxidation, and oxidative DNA adducts.
10 urther includes, among others, various bulky DNA adducts.
11 bles quantitative immunodetection of protein-DNA adducts.
12 by promoting accumulation of topoisomerase 1-DNA adducts.
13 of CP-TGGA compared to OX-TGGA and other Pt-DNA adducts.
14 dG residues in DNA to form aristolactam (AL)-DNA adducts.
15 toxicity vs. DNA of chemicals forming stable DNA adducts.
16 amino group of purine bases generating bulky DNA adducts.
17 ctive oxygen species and by the formation of DNA adducts.
18 UvrABC incisions of the bulky aminofluorene DNA adducts.
19 PC-RAD23B, failed to specifically bind to AL-DNA adducts.
20 sociated with the presence of detectable PAH-DNA adducts.
21 id reacts with DNA to form aristolactam (AL)-DNA adducts.
22 mainly responsible for removal of pyriplatin-DNA adducts.
23 ing algorithm can be used to detect putative DNA adducts.
24 ct to demonstrate the applicability to other DNA adducts.
25 dependent and sequence-specific formation of DNA adducts.
26 enal, which cause the formation of mutagenic DNA adducts.
27 n of persistent imidazole ring-opened AFB(1)-DNA adducts.
28 then can react with DNA to form carcinogenic DNA adducts.
29 ied DNA and, more frequently, when bypassing DNA adducts.
30 que DNA repair pathway that removes platinum-DNA adducts.
31 P450 enzymes in enzyme-DNA films to produce DNA adducts.
32 efficiency and also produce covalent pyrene-DNA adducts.
33 e of DNA-distorting damage such as cisplatin-DNA adducts.
34 tes to the accumulative pattern of cisplatin-DNA adducts.
35 e (N2-CEdG) is a major marker for AGE-linked DNA adducts.
36 o study the formation of endo- and exogenous DNA adducts.
37 , chromium stimulates the formation of B[a]P DNA adducts.
38 DNA-distorting lesions, including cisplatin-DNA adducts.
39 and can react with DNA in the films to form DNA adducts.
40 ull scan, was included for detecting unknown DNA adducts.
41 he development of technologies for detecting DNA adducts.
42 s influence the hPol eta-catalyzed bypass of DNA adducts.
43 revelation of the biological consequences of DNA adducts.
44 fter metabolic activation, with DNA to yield DNA adducts.
47 uniquely blocks excision repair of cisplatin-DNA adducts, 1,2-intrastrand cross-links, to potentiate
48 DNA templates modified with the carcinogenic DNA adducts, 2-aminofluoene (AF) or N-acetyl-2-aminofluo
49 cherichia coli AlkB dioxygenase of exocyclic DNA adducts 3,N(4)-ethenocytosine, 1,N(6)-ethenoadenine,
50 cts with DNA to form the aristolactam (AL-I)-DNA adduct 7-(deoxyadenosin-N(6)-yl) aristolactam I (dA-
51 to chemicals can result in the formation of DNA adducts, a molecular initiating event in genotoxin-i
52 , the mutagenic property of the primary AFB1-DNA adduct, AFB1-N7-Gua, in mammalian cells has not been
54 neo/neo) and Hus1(neo/Delta1) cells with the DNA adducting agent benzo(a)pyrene dihydrodriol epoxide
55 The preferential formation of AFB(1)-induced DNA adducts along the cII transgene was almost exclusive
57 The applications of mass spectrometry-based DNA adduct analysis for predicting the therapeutic outco
64 significantly reduces formation of aflatoxin-DNA adducts and decreases size and number of aflatoxin-i
66 (in a subset), and quantified benzo[a]pyrene-DNA adducts and genomic DNA methylation in cord blood DN
67 our research on the biological processing of DNA adducts and how this may impact the observed product
68 s corresponding to metabolites known to form DNA adducts and initiate lung cancer (2.35 A) or with tw
69 teins have been demonstrated to bind to CDDP-DNA adducts and initiate MMR protein-dependent cell deat
70 s involved in the recognition of these bulky DNA adducts and initiates the global genomic nucleotide
71 nly be formed through dissociation of duplex DNA adducts and not by direct interaction of PBDs with s
72 Proteins that discriminate between cisplatin-DNA adducts and oxaliplatin-DNA adducts are thought to b
73 escribe the first structure of levuglandinyl-DNA adducts and provide the tools with which to evaluate
74 eta is essential for processing AFB1-induced DNA adducts and that, in its absence, cells do not have
75 We mapped the formation of acrolein-induced DNA adducts and the kinetics of repair of the induced le
76 A1 are required for both the removal of Top2-DNA adducts and the subsequent resection of Top2-adducte
77 es between RC-DNA and cellular topoisomerase-DNA adducts and their known repair by tyrosyl-DNA-phosph
78 eptor (AR) ligand, is known to form covalent DNA adducts and to induce apoptosis potently in AR-posit
81 t process that leads to formation of the PBD-DNA adduct, and have allowed the preference of 3a for IC
83 pol delta L606K is impaired in the bypass of DNA adducts, and the homologous variant in mouse embryon
84 chniques for the quantitative measurement of DNA adducts, and the use of LC-MS along with molecular b
85 on mechanism by MXY, which leads to covalent-DNA adducts; and (iv) the redox properties of the adduct
90 rtain DNA primary or secondary structures or DNA adducts are known to cause transcriptional pausing a
93 research has revealed that pyrimidopurinone DNA adducts are subject to enzymatic oxidation in vitro
94 etween cisplatin-DNA adducts and oxaliplatin-DNA adducts are thought to be responsible for the differ
96 data support that N(2)-CEdG, a minor-groove DNA adduct arising from MG, is an important endogenous s
99 h form the same monofunctional-intercalative DNA adducts as the parent compounds, as demonstrated in
100 tabolites, estrogen conjugates, and estrogen-DNA adducts as well as exogenous steroid derivatives.
101 rmation rate measurements of major and minor DNA adducts as well as the metabolites themselves in <5
105 cation-dependent removal of Topo-isomerase I-DNA adducts at the step of strand cleavage, leading to s
107 Second, targeted detection of anticipated DNA adducts based on the reactivity of the DNA alkylatin
110 that Y-family DNA polymerases tolerate large DNA adducts, but a substantial decrease in catalytic eff
111 says have been used for the analysis of many DNA adducts, but problems are frequently encountered in
112 a efficiently replicates past a minor groove DNA adduct by positioning the adducted base in the syn c
113 oindels are 'scars' from the bypass of large DNA adducts by a translesional polymerase, e.g. the 'Tar
114 ecent studies have demonstrated that various DNA adducts can be detected in human tissues and fluids
122 N(2)-yl)-1-aminopyrene (dG(1,8)), one of the DNA adducts derived from 1-NP, can be bypassed by Sulfol
126 e used to simultaneously screen for multiple DNA adducts derived from different classes of carcinogen
127 NA adducts from archived tissue by measuring DNA adducts derived from four other classes of human car
128 ligned 10S (+)-trans-anti-B[a]P-N(2)-dG (G*) DNA adduct, derived from the environmental carcinogen be
130 he relative stability of single-stranded PBD/DNA adducts despite a complete loss of minor groove stru
131 igarette smoking increases oxidative damage, DNA adducts, DNA strand breaks, chromosomal aberrations,
133 of the toxic and mutagenic properties of the DNA adduct EA have been limited to in vitro experiments
134 ) and Csb(-/-) mice fail to remove cisplatin-DNA adducts efficiently in vitro; and unlike Xpc(-/-) mi
135 ication forks initially encountering a bulky DNA adduct exhibit a dual nature of stalling: a checkpoi
136 first quantitative analysis of DEB specific DNA adducts following low ppm and subppm exposure to BD.
138 s, NO-aspirin 2 inhibited [3H]benzo[a]pyrene-DNA adduct formation and DNA damage elicited by TCDD or
139 base for dichloromethane genotoxicity (i.e., DNA adduct formation and gene mutations in target tissue
141 xogenous FA causes only a modest increase in DNA adduct formation compared with the amount of adducts
143 ar uptake, aqueous reactivity, and extent of DNA adduct formation in the A2780 ovarian carcinoma cell
145 does not induce p53R2, suggesting that DNMT/DNA adduct formation is the molecular trigger for p53R2
146 Experimental evidence suggests that PAH-DNA adduct formation may preferentially target methylate
148 ytotoxicity, cDDP cellular accumulation, and DNA adduct formation was compared in the CLDN3- and CLDN
149 brane potential and terminating in oxidative DNA adduct formation, DNA strand breakage, and cell deat
151 abricated to measure reactive metabolite and DNA-adduct formation rates relevant to genotoxicity scre
153 may be the case with ethano-adenine (EA), a DNA adduct formed by an important anticancer drug, BCNU,
155 inobiphenyl (dG-C8-ABP), the predominant ABP-DNA adduct formed in bladder cells and tissues, was mark
156 s genome integrity by hydrolyzing 5'-tyrosyl DNA adducts formed by abortive topoisomerase II (Top2) c
158 ance by catalyzing the replicative bypass of DNA adducts formed by the widely used chemotherapeutic a
159 known nucleotide composition and analysis of DNA adducts formed from chemically diverse AAs in vitro.
160 re exceptionally bulky, structurally diverse DNA adducts formed in cells upon exposure to endogenous
161 the efficacy of our method for retrieval of DNA adducts from archived tissue by measuring DNA adduct
164 ite the chemically different nature of their DNA adducts, further supporting a role for monofunctiona
165 is the most common method for biomonitoring DNA adducts, generally targeting single exposures and me
166 However, the genomic pattern of cisplatin-DNA adducts has remained unknown owing to the lack of a
167 However, no exogenous formaldehyde-induced DNA adducts have been detected in animals after inhalati
170 rcinogens derived from cooked meats, such as DNA adducts, have not been identified in human samples t
171 t increase in the 4-oxo-2(E)-nonenal-derived DNA-adduct, heptanone-etheno-2'-deoxyguanosine (Hepsilon
172 , the chemical constitution of the retrieved DNA adducts hint at a direct link with an increase in NO
175 It can be used to detect topoisomerase 1-DNA adducts in as little as 60 ng of DNA, corresponding
178 s and accurate measurements of the levels of DNA adducts in cellular and tissue DNA constitute the fi
179 Studies showed that levels of ethylated DNA adducts in certain tissues and urine are higher in s
181 that a broad spectrum of combustion-related DNA adducts in cord blood was associated with attention
184 s of binding of PARP-1 to different platinum-DNA adducts in greater detail, biotinylated DNA probes c
185 ts the interpretation that formation of AFB1-DNA adducts in hepatocytes seeds a population of mutatio
186 ed RADAR assay can detect Top1-DNA and Top2a-DNA adducts in human cells, and gyrase-DNA adducts in Es
188 antification of glyoxal-derived cross-linked DNA adducts in human leukocyte DNA and their association
193 ns between a DNA polymerase and carcinogenic DNA adducts in real-time by single-molecule fluorescence
195 this neuropathy correlates with formation of DNA adducts in sensory neurons, growing evidence suggest
197 cally inhibits repair of the major cisplatin-DNA adducts in TGCT cells by using the human TGCT excisi
198 chemicals, by simultaneously detecting their DNA adducts in the genome; some of which may induce canc
201 we identified dA-aristolactam (AL) and dG-AL DNA adducts in the renal cortex of patients with EN but
203 od crops (e.g., broccoli and cabbage), forms DNA adducts in vitro and is mutagenic to bacterial and m
205 n was associated with increased formation of DNA adducts, increased apoptosis, and intracellular sign
206 To identify the mechanisms by which bulky DNA adducts induce damage signaling, we developed an in
208 e genome for 8-oxoguanine, a major mutagenic DNA adduct induced by reactive oxygen species, and catal
209 loped to investigate anticipated and unknown DNA adducts induced by DNA alkylating agents in biologic
210 s mismatched nucleotides but also recognizes DNA adducts induced by DNA-damaging agents, and triggers
211 cted to be a powerful tool for screening for DNA adducts induced by endogenous or exogenous exposures
212 ed the processing of topoisomerase II (Top2)-DNA adducts induced by treatment with the chemotherapeut
215 ), which covalently bind to DNA to form drug-DNA adducts, is linked to their recognition by repair pr
217 net accumulation of platinum (Pt) and the Pt-DNA adduct levels were reduced in CLDN3KD and CLDN4KD ce
218 ould significantly advance studies regarding DNA adduct levels, which are extremely difficult to dete
220 of the deoxyribose (dR) from the protonated DNA adducts ([M + H - 116]+) in the MS/MS scan mode trig
221 and quantification of both known and unknown DNA adducts, mass spectrometry (MS) is deemed to be the
223 to retrospectively analyze FFPE tissues for DNA adducts may provide clues to the origin of human can
225 ss spectrometry to quantify the formaldehyde-DNA adduct N(6)-hydroxymethyldeoxyadenosine (N(6)-HOMe-d
226 dA in a DNA duplex, the prototype arylamine-DNA adduct [N-(2'-deoxyguanosin-yl)-7-fluoro-2-aminofluo
229 ly higher concentrations of the NOC-specific DNA adduct O(6)-carboxy-methylguanine when pork underwen
238 S) was employed to simultaneously screen for DNA adducts of environmental, dietary, and endogenous ge
239 ve nano-LC-Orbitrap MS (n) method to measure DNA adducts of several carcinogens originating from well
240 an hepatocytes treated with 4-ABP, and three DNA adducts of the cooked-meat carcinogen 2-amino-3,8-di
242 results indicate that structurally different DNA adducts of these platinum complexes exhibit a differ
244 ll DNA from tobacco smokers was screened for DNA adducts of various classes of carcinogens in tobacco
245 cular epidemiologic studies, measurements of DNA adducts often are precluded by the unavailability of
246 Cells defective in repairing (6-4) Py:Py DNA adducts or processing DNA crosslinks are extremely s
247 dihydro-2'-deoxyguanosine (oxoG) is a common DNA adduct produced by the oxidation of DNA by reactive
248 major mutagenic, carcinogenic and cytotoxic DNA adduct produced by various endogenous and exogenous
249 ne (N(2),3-epsilonG) is one of the exocyclic DNA adducts produced by endogenous processes (e.g. lipid
250 reactive oxygen species or recognize damaged DNA adducts promote infection, suggesting that H. pylori
251 To our knowledge, this is the most sensitive DNA adduct quantitation method yet reported, exceeding t
255 , and that Gli1 strongly influences platinum-DNA adduct repair, and cellular sensitivity to cisplatin
257 s tested and optimized using a mixture of 18 DNA adducts representing a range of biologically relevan
261 g pregnancy as well as by the measurement of DNA adducts specific to benzo[a]pyrene (BaP), a represen
262 t with nucleobases to give carboxymethylated DNA adducts such as N3-carboxymethylthymidine (N3-CMdT)
263 he main pathway used for the repair of bulky DNA adducts such as those caused by UV light exposure an
264 lein reacts with DNA bases forming exocyclic DNA adducts, such as gamma-hydroxy-1,N(2)-propano-2'-deo
265 esterase I (Tdp1) catalyzes the repair of 3'-DNA adducts, such as the 3'-phosphotyrosyl linkage of DN
266 mokers in levels of a leukocyte formaldehyde-DNA adduct, suggesting a potentially important and previ
268 thylguanine (O(6)-MeG) is a highly mutagenic DNA adduct that forms in human genomic DNA upon reaction
272 h a stable A.T base pair to create alkylated DNA adducts that can be removed by alkyladenine DNA glyc
274 NA polymerases are unable to synthesize past DNA adducts that result from diverse chemicals, reactive
275 This method is based on the RADAR assay for DNA adducts that we previously developed, but incorporat
276 to create vectors containing a site-specific DNA adduct, the mutagenic potential was determined in pr
278 : a nucleophilic His (His(nuc)) that attacks DNA adducts to form a covalent 3'-phosphohistidyl interm
279 the polycyclic aromatic hydrocarbon-derived DNA adducts (+)-trans-anti-B[a]P-N(6)-dA, which is subje
281 he DNA adductome; the levels of 22 different DNA adduct types significantly increased upon the consum
282 to occluded DNA ends by removing Ku or other DNA adducts via an Mre11-dependent nucleolytic reaction.
283 ase D superfamily that hydrolyzes 3'-phospho-DNA adducts via two conserved catalytic histidines-one a
285 ial nucleotide opposite an O(6)-alkylguanine DNA adduct was verified using a novel 2',3'-dideoxy deri
286 o studies demonstrating the formation of MMC-DNA adducts, we chose to investigate alternative nucleic
287 d3-related (ATR) is also stimulated by bulky DNA adducts, we conclude that a common biochemical mecha
292 chemicals to DNA results in the formation of DNA adducts which are reflective of exposure of the huma
293 multaneous mass spectrometric analyses of 16 DNA adducts, which can be easily extended by adducts for
294 lymerases discriminate between CP- and OX-GG DNA adducts, which could partly account for differences
295 l cellular defense system against carcinogen-DNA adducts, which, if not repaired, can initiate cancer
297 method, we measured the levels of the three DNA adducts with the use of 10 mug of DNA isolated from
298 binding protein domain HMGB1a binds to CP-GG DNA adducts with up to 53-fold greater affinity than to
299 ts for the possible interactions of platinum DNA adducts with zinc finger proteins, the complexes [Pt
300 ective, we focus on the analysis of multiple DNA adducts within a sample with the emphasis on untarge
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