ライフサイエンスコーパス: DNA fingerprint

1 s restriction fragment length polymorphisms (DNA fingerprints).

2 bacteria matched the monkey input strain in DNA fingerprint.

3 ut bacterial vaginosis, none shared the same DNA fingerprint.

4 tuberculosis isolates with identical IS6110 DNA fingerprints.

5 he 3 patient-workers' isolates had different DNA fingerprints.

6 parated on analytical agarose gels to create DNA fingerprints.

7 seven M. tuberculosis isolates had matching DNA fingerprints.

8 s, the method provided a set of reproducible DNA fingerprints.

9 ncrease or decrease in the band intensity of DNA fingerprints.

10 ical technique utilized in the production of DNA fingerprints.

11 overed during periodic videogastroscopy were DNA fingerprinted.

12 repeats used for over 20 years in humans for DNA fingerprinting.

13 sis isolates from the study period underwent DNA fingerprinting.

14 their pigs at birth were analyzed by genomic DNA fingerprinting.

15 s of Mycobacterium avium could be matched by DNA fingerprinting.

16 or observations attributed to reinfection by DNA fingerprinting.

17 and pulsed-field gel electrophoresis (PFGE) DNA fingerprinting.

18 epetitive-sequence polymerase chain reaction DNA fingerprinting.

19 DNA fingerprint analysis confirmed that once established

20 DNA fingerprint analysis of bacterial communities based

21 DNA fingerprint analysis revealed the presence of at lea

22 Genomic DNA fingerprint analysis was performed on 39 Staphylococ

23 is had sufficient overlap to be confirmed by DNA fingerprint analysis.

24 membranes used previously in routine IS6110 DNA fingerprint analysis.

25 Zygosity was confirmed by DNA fingerprint analysis.

26 ) is amenable to automatic computer-assisted DNA fingerprint analysis.

27 DNA fingerprinting analysis of serial sputum cultures fr

28 25%) of 104 clustered patients shared both a DNA fingerprint and strong antecedent epidemiologic link

29 Genotypic analysis was done by IS6110 DNA fingerprinting and a novel strain-specific polymeras

30 IS6110 DNA fingerprinting and automated DNA sequencing of a reg

31 ability in the colonic mucosa as measured by DNA fingerprinting and fluorescent in situ hybridization

32 identified by randomly amplified polymorphic DNA fingerprinting and gene sequencing: one group from s

33 cin (Gm phenotype), all of which had similar DNA fingerprints and all of which were collected during

34 e of their usefulness as genomic markers and DNA fingerprints and more recently as their role in huma

35 in GelBuddy has been successfully applied to DNA fingerprinting applications, such as AFLP.

36 premise that tuberculosis cases that share a DNA fingerprint are epidemiologically related while case

37 from healthy white South Africans were also DNA fingerprinted as controls.

38 able repetitive-sequence-based PCR (rep-PCR) DNA fingerprinting assay adapted to an automated format,

39 We investigated whether quantitative DNA fingerprinting, based on allele imbalance (AI) or lo

40 The 64 cases with clustered DNA fingerprints but without epidemiologic links shared

41 agment length polymorphism analysis and were DNA fingerprinted by random amplification of polymorphic

42 Genomic DNA fingerprinting by pulsed-field gel electrophoresis r

43 DNA fingerprinting by pulsed-field gel electrophoresis s

44 In this study, we assessed whether DNA fingerprinting by repetitive element sequence-based

45 Unbiased DNA fingerprinting by the arbitrarily primed PCR allows

46 S. mutans were examined based on chromosomal DNA fingerprints (CDF), a hypervariable region (HVR) of

47 Supplementary analyses were done using DNA fingerprinting, cloning, and sequencing.

48 4%) of the remaining 168 isolates were in 15 DNA fingerprinting clusters, which ranged in size from 2

49 L. crispatus CTV-05 had a unique DNA fingerprint compared to all other lactobacilli.

50 Paired DNA fingerprint data were available for 130 (64%) of 203

51 and are unlikely to affect findings based on DNA fingerprinting data.

52 Together with DNA fingerprints derived from AFLP markers, we evaluated

53 ins inferred to be clonally related based on DNA fingerprinting) detected, one, lineage C, dominated

54 acterium tuberculosis by generating distinct DNA fingerprints directly from primary cultures.

55 DNA fingerprinting establishes the genetic relatedness o

56 Identification of bacterial strains by DNA fingerprinting facilitates epidemiologic studies and

57 e 301 patients with completed interviews and DNA fingerprints fell into 20 different clusters of 2 to

58 n of (IS6110) can be harnessed to generate a DNA fingerprint for each strain, by digesting the genome

59 The study findings do not support the use of DNA fingerprinting for nosocomial tuberculosis surveilla

60 DNA fingerprints for 27 production lots of L. crispatus

61 oach for the computational identification of DNA fingerprints for design of microarray-based pathogen

62 We employed TOFI to identify in silico DNA fingerprints for several bacteria and plasmid sequen

63 and analysis of approximately 150 in silico DNA fingerprints for Yersinia pestis and 250 fingerprint

64 Fosmid paired-end sequences and DNA fingerprints from a query genome are compared to a r

65 IS6110 DNA fingerprints from initial and subsequent episodes of

66 Rep-PCR also generated DNA fingerprints from M. intracellulare (n = 8) and MAC(

67 ogy developed for optical mapping to acquire DNA fingerprints from single genomes for the purpose of

68 the diversity of Mycobacterium tuberculosis DNA fingerprints from three geographically separate stat

69 a constant enzyme buffer, and the intrinsic DNA fingerprints, from which amplicons may be quantitati

70 Only 20 (24%) of 84 cases with clustered DNA fingerprints had epidemiologic evidence of recent co

71 DNA fingerprinting helps determine loci of TB transmissi

72 have unlocked new opportunities to identify 'DNA fingerprints', i.e. oligonucleotide sequences that u

73 Prospective surveillance and DNA fingerprinting identified the cluster, enabling heal

74 F with this approach, the finding of altered DNA fingerprints in these microscopic lesions suggests t

75 Importantly, DNA fingerprinting indicates that the human iPS cells we

76 identifying victims in a mass disaster using DNA fingerprints involves a scale of computation that re

77 the molecular epidemiology of tuberculosis, DNA fingerprinting is used to estimate the fraction of i

78 rep-PCR DNA fingerprinting is useful for strain typing and for e

79 sequencing and repetitive element PCR-based DNA fingerprinting, it was found that H. aurati represen

80 e used as controls to create a rep-PCR-based DNA fingerprint library with the DiversiLab software.

81 tion at vegetative incompatibility (vic) and DNA fingerprinting loci.

82 4 culture-positive inmates had isolates with DNA fingerprints matching those of other inmates.

83 The use of DNA fingerprinting may be useful in subsequent epidemiol

84 In a pilot study of nine women, this DNA fingerprinting method distinguished CTV-05 from othe

85 North and South America and used a ribosomal DNA-fingerprinting method to compare bacterial community

86 e detection of mRNA expression, and numerous DNA fingerprinting methods have also proved valuable, be

87 ng two polymerase chain reaction (PCR)-based DNA fingerprinting methods, arbitrarily primed PCR and i

88 idlands from 2001-05 (n=20) were assessed by DNA fingerprinting (MIRU-VNTR and spoligotyping), with a

89 ude qualitative detection, sub-species-level DNA fingerprinting, molecular resistance testing and gen

90 horesis and ethidium bromide staining of the DNA fingerprints obtained were compared.

91 IS711-based DNA fingerprinting of 23 isolates from marine mammals sh

92 The DNA fingerprinting of all M. tuberculosis isolates from

93 DNA fingerprinting of Mycobacterium tuberculosis is used

94 of relapse and reinfection, distinguished by DNA fingerprinting of Mycobacterium tuberculosis strains

95 plays during tumor development, we compared DNA fingerprints of 44 aberrant crypt foci (ACF; the ear

96 e for varying information content derived by DNA fingerprints of contrasting pattern complexity.

97 based PCR (rep-PCR) is useful for generating DNA fingerprints of diverse bacterial and fungal species

98 DNA fingerprints of Mycobacterium tuberculosis are produ

99 s are illustrated by an analysis of standard DNA fingerprints of Mycobacterium tuberculosis in San Fr

100 A comparison was made between DNA fingerprints of Mycobacterium tuberculosis produced

101 with positive cultures) were identified; the DNA fingerprints of the 13 isolates available for testin

102 Pulsed-field gel electrophoresis (DNA fingerprinting) of group A streptococcal isolates ob

103 r epidemiological Mycobacterium tuberculosis DNA fingerprint-outbreak database.

104 rent clinical laboratories revealed that the DNA fingerprint pattern of each case isolate was indisti

105 matched an MDR-TB patient-worker isolate by DNA fingerprint pattern.

106 The rate of DNA fingerprint-pattern evolution is not linear, and rat

107 The DNA fingerprint patterns derived from the SINE probes ar

108 Among 21 S. aureus genomic DNA fingerprint patterns identified, five clonotypes wer

109 terspersed nuclear elements (SINEs) detected DNA fingerprint patterns in 14 species of salmonid fishe

110 DNA fingerprint patterns of Mycobacterium tuberculosis s

111 Comparison of the DNA fingerprint patterns with those in international dat

112 Compared with strains having unique genomic DNA fingerprint patterns, the S. aureus clonotypes occur

113 e analysis to the 275 isolates with distinct DNA fingerprint patterns, we observed the same associati

114 r, recent analyses of the URA5 sequences and DNA fingerprinting patterns suggest significant genetic

115 as defined by insertion sequence (IS) IS6110 DNA fingerprinting, polymorphic GC-rich repetitive seque

116 es, and Southern blot hybridization with the DNA fingerprinting probe Ca3 combined with computer-assi

117 cted for DNA fingerprinting with the complex DNA fingerprinting probe Ca3.

118 microevolutionary changes identified by the DNA fingerprinting probe Cg6 and does not involve tandem

119 Molecular fingerprinting with Ca3, a complex DNA fingerprinting probe specific for C. albicans, and C

120 pecific for C. albicans, and Cd25, a complex DNA fingerprinting probe specific for C. dubliniensis, p

121 A complex 15-kb DNA fingerprinting probe, Cp3-13, was therefore isolated

122 rable for some applications than traditional DNA fingerprinting probes that detect tandemly repeated

123 re cloned and analyzed for their efficacy as DNA fingerprinting probes.

124 for antibiotic susceptibility, O:H serotype, DNA fingerprinting, pulsed-field gel electrophoretic pat

125 Short tandem repeats for DNA fingerprinting represents an efficient and reproduci

126 DNA fingerprints resolved 617 different genotypes among

127 DNA fingerprinting results confirm that the NIKS cells o

128 Microsatellite DNA fingerprinting revealed that a male's relative sperm

129 is, mapping studies, human identity testing (DNA fingerprinting), sequence homology and population st

130 m var. Copenhagen strains) but that had AFLP DNA fingerprints similar or identical to those of strain

131 polymorphism (AFLP) analysis, which revealed DNA fingerprint similarities that correlated with both r

132 We provide a quantifiable definition of a DNA fingerprint stated both from a computational as well

133 l were resistant to 7 drugs and had matching DNA fingerprints (strain W1).

134 h a setting, we performed a population-based DNA fingerprinting study among TB patients in Botswana.

135 identified by computer-assisted analysis of DNA fingerprints submitted during 1996 and 1997 by diffe

136 e patients had indistinguishable profiles by DNA fingerprinting, suggesting common-source exposure.

137 There was a common pattern of DNA fingerprinting, suggesting that the isolates belonge

138 Therefore, we applied a novel DNA fingerprinting technique based on polymerase chain r

139 n site PCR (IRS-PCR) is a recently described DNA fingerprinting technique based on selective amplific

140 The use of a supplemental DNA fingerprinting technique decreased clustering and im

141 Here we describe results from a DNA fingerprinting technique that overcomes this problem

142 fragment polymorphism (AFLP) is a PCR-based DNA fingerprinting technique.

143 c microbes works by genotyping isolates with DNA fingerprinting techniques and then using these genot

144 opulation from an undisturbed site, and (iv) DNA fingerprinting techniques can be exploited to unders

145 rms at least comparably to other established DNA fingerprinting techniques.

146 We present the use of short tandem repeat DNA "fingerprinting" technology as a method of early, de

147 It also produces a DNA fingerprint that is distinctive to the flanking sequ

148 We used multilocus minisatellite DNA fingerprinting to examine the local genetic structur

149 study of sufficient size and duration using DNA fingerprinting to investigate tuberculosis relapse a

150 We used DNA fingerprinting to test the assumption that tuberculo

151 the value of MLST relative to those of other DNA fingerprinting tools for discriminating among strain

152 modification of PCR that generates a genomic DNA fingerprint using a single, arbitrarily chosen prime

153 ycobacterium tuberculosis isolates underwent DNA fingerprinting using IS6110 restriction fragment len

154 within the species that had been selected by DNA fingerprinting using probes linked to mating type.

155 e mutation model to describe the dynamics of DNA fingerprint variation in Mycobacterium tuberculosis.

156 DNA fingerprint was significantly associated with region

157 DNA fingerprinting was performed on Mycobacterium tuberc

158 The efficacy of Cp3-13 for DNA fingerprinting was verified by a comparison of its c

159 andem repeats for each specimen and a unique DNA "fingerprint" was obtained from each.

160 DNA fingerprints were available for both members of thes

161 Paired DNA fingerprints were available in 39 of 65 recurrences:

162 rep-PCR-based DNA fingerprints were reproducible and were consistent f

163 Nuclear RFLPs and DNA fingerprints were used to make indirect and direct m

164 DNA fingerprinting with a digoxigenin-labeled C. albican

165 f clinical E. coli mastitis were compared by DNA fingerprinting with enterobacterial repetitive inter

166 Candida albicans isolates were selected for DNA fingerprinting with the complex DNA fingerprinting p

167 Computer-assisted DNA fingerprinting with the complex probe Ca3 has been u

168 urrent infections was assessed by sequential DNA fingerprinting with the following three probes: the

169 We performed DNA fingerprinting with the IS6110 insertion sequence of

170 DNA fingerprinting with the IS6110 technique was not a s

171 DNA fingerprints with >5 bands were considered clustered

172 tical or differed by at most one band, while DNA fingerprints with < or =5 bands were considered clus

173 Bacillus strains and quantitatively compare DNA fingerprints with the known taxonomy of the genus.