ライフサイエンスコーパス: Desulfovibrio

1 may include sulfate-reducing species (e.g., Desulfovibrio).

2 ing to Acetobacterium, Sulfurospirillum, and Desulfovibrio.

3 may include sulfate reducing species such as Desulfovibrio.

4 m (a sulfur oxidizer and NO3(-) reducer) and Desulfovibrio (a SO4(2-) reducer) become dominant in Sta

5 Desulfovibrio africanus strain Walvis Bay is a Hg-methyl

6 Desulfovibrio africanus strain Walvis Bay is an anaerobi

7 Desulfovibrio alaskensis G20 (formerly Desulfovibrio des

8 ative transcriptional and mutant analyses of Desulfovibrio alaskensis strain G20 and Desulfovibrio vu

9 uating methanogenic environments, we studied Desulfovibrio alaskensis strain G20 grown in chemostats

10 eptor availability was evaluated by studying Desulfovibrio alaskensis strain G20 under varying respir

11 n the sulphate-reducing Deltaproteobacterium Desulfovibrio alaskensis.

12 ed dominance of Sulfurospirillum, Rhizobium, Desulfovibrio and four members of the Clostridiales fami

13 hydrogenotrophic methanogens and syntrophic Desulfovibrio and the decrease of aceticlastic methanoge

14 sed abundance of Clostridium, Lactobacillus, Desulfovibrio, and Methylobacterium and an increased ten

15 ell genomic amplicons from Desulfobulbus and Desulfovibrio (class Deltaproteobacteria) to better unde

16 ochromes c3 (Norway 4 and 9974) than for the Desulfovibrio (D.) gigas, D. vulgaris, and D. desulfuric

17 om the anaerobic sulfate-reducing bacterium, Desulfovibrio (D.) vulgaris (Hildenborough).

18 The steady state kinetics of a Desulfovibrio (D.) vulgaris superoxide reductase (SOR) t

19 In this context, the methylating SRB Desulfovibrio dechloracetivorans (strain BerOc1) was inc

20 dimers bind strongly to apo-flavodoxin from Desulfovibrio desulfuricans (30 degrees C, 20 mM Hepes,

21 of homodimeric desulfoferrodoxin (dfx) from Desulfovibrio desulfuricans (ATCC 27774).

22 Fe clusters in an Fe-S protein isolated from Desulfovibrio desulfuricans (ATCC 27774).

23 io vulgaris Hildenborough, but two copies in Desulfovibrio desulfuricans 27774, which can use nitrate

24 We show here that FMN binding to Desulfovibrio desulfuricans apo-flavodoxin is faster and

25 derstand this reaction, we analyzed a set of Desulfovibrio desulfuricans apoflavodoxin variants with

26 48-residue single-domain alpha/beta protein, Desulfovibrio desulfuricans apoflavodoxin.

27 O2 vary greatly; the [FeFe]-hydrogenase from Desulfovibrio desulfuricans ATCC 7757, an anaerobe, is i

28 One case of primary Desulfovibrio desulfuricans bacteremia in an immunocompe

29 ermal unfolding of the apo and holo forms of Desulfovibrio desulfuricans flavodoxin, which noncovalen

30 In this work, the ability of Desulfovibrio desulfuricans formate dehydrogenase (Dd FD

31 Desulfovibrio desulfuricans G20 grows and reduces 20 mM

32 on insertion mutant has been identified in a Desulfovibrio desulfuricans G20 mutant library that does

33 of the type I tetraheme cytochrome c(3) from Desulfovibrio desulfuricans G20 was determined to 1.5 An

34 Desulfovibrio alaskensis G20 (formerly Desulfovibrio desulfuricans G20) is a Gram-negative meso

35 n mutant library containing 5,760 mutants of Desulfovibrio desulfuricans G20.

36 in two strains: Desulfovibrio sp. BerOc1 and Desulfovibrio desulfuricans G200 (which exhibit differen

37 The sulfate reducing bacterium Desulfovibrio desulfuricans inhabits both the human gut

38 The [FeFe] hydrogenase from Desulfovibrio desulfuricans is exceptionally active and

39 nd hgcB, required for mercury methylation by Desulfovibrio desulfuricans ND132 and Geobacter sulfurre

40 he FeRB Geobacter sulfurreducens and the SRB Desulfovibrio desulfuricans ND132 as model organisms, we

41 n of stable-isotope enriched (201)HgCl(2) by Desulfovibrio desulfuricans ND132 in short-term washed c

42 xperiments with the Hg-methylating bacterium Desulfovibrio desulfuricans ND132 to elucidate the role

43 educens PCA and a sulfate-reducing bacterium Desulfovibrio desulfuricans ND132 under nonsulfidic cond

44 Using a model Hg-methylating bacterium, Desulfovibrio desulfuricans ND132, we evaluated Hg-DOM-s

45 ylate dissolved elemental Hg(0) as shown for Desulfovibrio desulfuricans ND132.

46 ic bacteria Geobacter sulfurreducens PCA and Desulfovibrio desulfuricans ND132.

47 Desulfovibrio desulfuricans strain ND132 is an anaerobic

48 ducted on biofilm and planktonic cultures of Desulfovibrio desulfuricans strains M8 and ND132.

49 Desulfovibrio desulfuricans was isolated from the blood

50 mpylobacter coli, Campylobacter upsaliensis, Desulfovibrio desulfuricans, Desulfovibrio gigas, and De

51 hylators included Desulfobulbus propionicus, Desulfovibrio desulfuricans, Desulfovibrio magneticus an

52 Recombinant versions of Desulfovibrio desulfuricans, Desulfovibrio vulgaris and

53 rcina barkeri and the delta-purple bacterium Desulfovibrio desulfuricans, respectively, while the 12-

54 he homologous protein desulfoferrodoxin from Desulfovibrio desulfuricans.

55 hat resembled the H(trans) state of DdH from Desulfovibrio desulfuricans.

56 ve not been identified to the species level, Desulfovibrio fairfieldensis and D. desulfuricans have b

57 mutants V74M L122A, V74M L122M, and V74M of Desulfovibrio fructosovorans [NiFe]-hydrogenase.

58 The heterodimeric [NiFe] hydrogenase from Desulfovibrio fructosovorans catalyzes the reversible ox

59 line of the -sensitive NiFe hydrogenase from Desulfovibrio fructosovorans.

60 The sulfate-reducing bacteria of the Desulfovibrio genus make three distinct modified tetrapy

61 SORs from Desulfovibrio gigas and Treponema pallidum showed simila

62 ional structures of the oxidised and reduced Desulfovibrio gigas cytochrome c(3) in solution were sol

63 parison of the [3Fe-4S]+ clusters in FdI and Desulfovibrio gigas ferredoxin II, refined at 1.7 A reso

64 nctions in the energy-yielding metabolism of Desulfovibrio gigas of the Bacteria domain.

65 d molybdoenzyme aldehyde oxidoreductase from Desulfovibrio gigas suggest that both enzymes utilize a

66 tallographically known aldehyde oxidase from Desulfovibrio gigas) and the higher pKa to substrate.

67 er upsaliensis, Desulfovibrio desulfuricans, Desulfovibrio gigas, and Desulfovibrio vulgaris, exhibit

68 s rubredoxins from Clostridium pasteurianum, Desulfovibrio gigas, Desulfovibrio vulgaris, and Pyrococ

69 ubredoxin:dioxygen oxidoreductase (ROO) from Desulfovibrio gigas.

70 e structure of a closely related enzyme from Desulfovibrio gigas.

71 ic adaptive flexibility that likely sustains Desulfovibrio in naturally fluctuating methanogenic envi

72 Eleven previous cases of Desulfovibrio infection are reviewed; most arose from a

73 Antimicrobial susceptibilities of 36 Desulfovibrio isolates are presented.

74 of shoulder hemiarthroplasty infection with Desulfovibrio legallii.

75 sted strains of Campylobacter, Desulfomonas, Desulfovibrio, Leptotrichia, Mobiluncus, Peptostreptococ

76 us propionicus, Desulfovibrio desulfuricans, Desulfovibrio magneticus and Geobacter sulfurreducens.

77 he process of magnetite biomineralization in Desulfovibrio magneticus sp. RS-1, the only reported spe

78 Desulfovibrio magneticus sp. strain RS-1 forms bullet-sh

79 A-phylotype related to the sulphate-reducing Desulfovibrio oxamicus DSM1925, whereas the ArrA sequenc

80 e set to better understand how the growth of Desulfovibrio piger is affected by, and affects the grow

81 vironmental factors that impact the niche of Desulfovibrio piger, the most common SRB in a surveyed c

82 M. smithii or the sulfate-reducing bacterium Desulfovibrio piger.

83 trite inhibited the dominating H2-scavenging Desulfovibrio population, and sustained the formation of

84 transformation of Hg species in two strains: Desulfovibrio sp. BerOc1 and Desulfovibrio desulfuricans

85 erium and an increase of Enterobacteriaceae, Desulfovibrio sp., and mainly Akkermansia muciniphila in

86 ple tests were useful for characterizing the Desulfovibrio species and differentiating them from othe

87 The four Desulfovibrio species could be distinguished from each o

88 2S and were desulfoviridin positive, and all Desulfovibrio species except D. piger were motile.

89 to the 10-microg colistin disk separated the Desulfovibrio species from most of the other genera, whi

90 All Desulfovibrio species produced H2S and were desulfovirid

91 es implicated in syntrophic metabolism among Desulfovibrio species suggest considerable variation in

92 Genomic data from oral Desulfobulbus and Desulfovibrio species were compared to other available d

93 ntral role in the bioenergetic metabolism of Desulfovibrio spp.

94 ates the absence of a conserved gene core in Desulfovibrio that would determine the ability for a syn

95 uate the metabolic flexibility of syntrophic Desulfovibrio to adapt to naturally fluctuating methanog

96 The adaptation capability of Desulfovibrio to natural fluctuations in electron accept

97 r part and near the ectosymbiont 'Candidatus Desulfovibrio trichonymphae' in the anterior part of the

98 es (SS) were associated with enterobacteria, desulfovibrios, type E Clostridium perfringens, and Ente

99 roquinones for one-electron reduction in the Desulfovibrio vulgaris ( D. vulgaris) flavodoxin ( E sq/

100 ssed from a gene-fusion with flavodoxin from Desulfovibrio vulgaris (2C9/FLD).

101 e trinuclear center, bacterial ferritin from Desulfovibrio vulgaris (DvFtn) and its E130A variant was

102 used at the genetic level to flavodoxin from Desulfovibrio vulgaris (FLD) to create the chimeric CYP2

103 om the anaerobic sulfate-reducing bacterium, Desulfovibrio vulgaris (Hildenborough), has a hemerythri

104 on protein of unknown function isolated from Desulfovibrio vulgaris (Hildenborough).

105 The periplasmic hydrogenase of Desulfovibrio vulgaris (Hildenbourough) is an all Fe-con

106 -catalase oxidative stress defense system in Desulfovibrio vulgaris (strain Hildenborough).

107 in this work by examination of an engineered Desulfovibrio vulgaris 2Fe-SOR variant, C13S, in which o

108 ant versions of Desulfovibrio desulfuricans, Desulfovibrio vulgaris and Methanosarcina barkeri AhbA/B

109 cerevisiae to environmental microbes such as Desulfovibrio vulgaris and Shewanella oneidensis.

110 ndent pairings (cocultures) of the bacterium Desulfovibrio vulgaris and the archaeon Methanococcus ma

111 on and protein abundance data collected from Desulfovibrio vulgaris by DNA microarray and liquid chro

112 operties of the soluble C-terminal domain of Desulfovibrio vulgaris CcmE, dvCcmE'.

113 Cytochrome c-553 from Desulfovibrio vulgaris exhibits a highly exposed heme an

114 Two mutants of the Desulfovibrio vulgaris flavodoxin, T12H and N14H, were g

115 In the Desulfovibrio vulgaris flavodoxin, the elimination of th

116 nse regulators (RR) were identified from the Desulfovibrio vulgaris genome.

117 microarray and proteomic data collected from Desulfovibrio vulgaris grown under three different condi

118 lavodoxin from the sulfate-reducing bacteria Desulfovibrio vulgaris has been proposed, based on elect

119 s for two syntrophic cocultures, Dhc195 with Desulfovibrio vulgaris Hildenborough (-13.0 +/- 2.0 per

120 le, most abundant multi-protein complexes in Desulfovibrio vulgaris Hildenborough (DvH) that are larg

121 pecific transcripts, causing a population of Desulfovibrio vulgaris Hildenborough (DvH) to collapse a

122 Desulfovibrio vulgaris Hildenborough belongs to a class

123 desulfothioredoxin (Dtrx) from the anaerobe Desulfovibrio vulgaris Hildenborough has been identified

124 Desulfovibrio vulgaris Hildenborough is a model organism

125 of the anaerobic, sulfate-reducing organism Desulfovibrio vulgaris Hildenborough to low-oxygen expos

126 The response of exponentially growing Desulfovibrio vulgaris Hildenborough to pH 10 stress was

127 The ability of Desulfovibrio vulgaris Hildenborough to reduce, and ther

128 ctivation of modA and modBC genes by TunR in Desulfovibrio vulgaris Hildenborough was confirmed in vi

129 istribution in central metabolic pathways of Desulfovibrio vulgaris Hildenborough was examined using

130 For the sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough, 347 of the 3634 ge

131 5' RNA sequencing to identify transcripts in Desulfovibrio vulgaris Hildenborough, a model sulfate-re

132 Desulfovibrio vulgaris Hildenborough, a sulfate-reducing

133 gene in the model sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough, but two copies in

134 Sulfate-reducing microbes, such as Desulfovibrio vulgaris Hildenborough, cause "souring" of

135 nalysis of a model sulfate-reducing microbe, Desulfovibrio vulgaris Hildenborough, suggested the use

136 In the model sulfate-reducing microbe Desulfovibrio vulgaris Hildenborough, the gene DVU_0916

137 a biomass hydrolysate of the soil bacterium Desulfovibrio vulgaris Hildenborough.

138 In this work, we studied FlxABCD of Desulfovibrio vulgaris Hildenborough.

139 ion of cationic metabolites in the bacterium Desulfovibrio vulgaris Hildenborough.

140 2+) complex with the [NiFe]-hydrogenase from Desulfovibrio vulgaris immobilized on a functionalized e

141 owth of the model sulfate-reducing bacterium Desulfovibrio vulgaris in the absence of sulfate or a sy

142 Flavodoxin from Desulfovibrio vulgaris is a low molecular weight (15 000

143 Cytochrome c(553) (cyt c(553)) from Desulfovibrio vulgaris is a small helical heme protein t

144 e (57)Fe-labelled fully reduced Ni-R form of Desulfovibrio vulgaris Miyazaki F [NiFe]-hydrogenase.

145 Antibodies raised against Desulfovibrio vulgaris Rbr reacted with both native and

146 Phascolopsis gouldii hemerythrin (Pg-Hr) and Desulfovibrio vulgaris rubrerythrin (Dv-Rr), have been e

147 mixed-valent (Fe(2+),Fe(3+)) diiron site of Desulfovibrio vulgaris rubrerythrin (Rbr(mv)) were deter

148 The X-ray crystal structure of recombinant Desulfovibrio vulgaris rubrerythrin (Rbr) that was subje

149 asurement on a similar protein isolated from Desulfovibrio vulgaris showed that the protein contains

150 s of Desulfovibrio alaskensis strain G20 and Desulfovibrio vulgaris strain Hildenborough growing synt

151 The capacity of Desulfovibrio vulgaris to reduce U(VI) was studied previ

152 Stopped-flow mixing of the Desulfovibrio vulgaris two-iron superoxide reductase (2F

153 tion, the properties of a beta-class CA from Desulfovibrio vulgaris were dramatically enhanced.

154 re present in the sulfate-reducing bacterium Desulfovibrio vulgaris, although it grows only poorly on

155 Most of these operons were also conserved in Desulfovibrio vulgaris, an additional metal reducing org

156 ostridium pasteurianum, Desulfovibrio gigas, Desulfovibrio vulgaris, and Pyrococcus furiosus.

157 br(red) from the sulfate reducing bacterium, Desulfovibrio vulgaris, as well as its azide adduct (Rbr

158 brio desulfuricans, Desulfovibrio gigas, and Desulfovibrio vulgaris, exhibited significantly relaxed

159 rmations using two genomes from each domain: Desulfovibrio vulgaris, Pseudomonas aeruginosa, Archaeog

160 rom the anaerobic sulfate-reducing bacterium Desulfovibrio vulgaris.

161 el for flavin binding to the flavodoxin from Desulfovibrio vulgaris.

162 MN) and riboflavin to the apoflavodoxin from Desulfovibrio vulgaris.

163 s on recombinant two-iron SOR (2Fe-SOR) from Desulfovibrio vulgaris.

164 lavodoxins from Clostridium beijerinckii and Desulfovibrio vulgaris.

165 scriptomic and proteomic data collected from Desulfovibrio vulgaris.

166 nctional urea transporter from the bacterium Desulfovibrio vulgaris.

167 inical isolates representing four species of Desulfovibrio were characterized using 16S rRNA gene seq

168 s, formate dehydrogenase, and cytochromes of Desulfovibrio were found in high abundance near the elec

169 Sulfate-reducing bacteria from the genus Desulfovibrio, which have been implicated in microbially