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1 E. coli ACPS is sufficiently different from the human fa
2 E. coli cells grown in rich medium that contained all am
3 E. coli grew from 56% (145/259) of the positive urine cu
4 E. coli infection stimulated proliferation of granulopoi
5 E. coli is a common human pathogen, but also a commensal
6 E. coli O157:H7 is an enterohemorrhagic bacteria respons
7 E. coli single strand (ss) DNA binding protein (SSB) is
8 We measured fitness of approximately 14,000 E. coli strains, each expressing a reporter gene with a
12 e enterococci, fewer environmentally adapted E. coli strains were isolated on selective media contain
13 iability and growth; and (6) ethanol-adapted E. coli cells restore the majority of these reduced acti
14 of both ethanol-stressed and ethanol-adapted E. coli cells with computationally predicated ethanol-bi
15 than 73% against B. subtilis and 67% against E. coli as compared with that of control PVDF, while age
16 er zerumbone showed highest activity against E. coli, whereas its derivatives were least effective ag
19 ills decreased disinfection efficacy against E. coli on heavy-duty tarp but does prevent splashing, w
22 reduction in tetracycline accumulation in an E. coli strain expressing the tetracycline-specific effl
23 ue peptides were identified from 50 ng of an E. coli digest, and 2158 protein groups and 10005 peptid
27 itol, with selective uptake in S. aureus and E. coli; and sorbitol, accumulating only in E. coli None
28 of serum-coated or -uncoated latex beads and E. coli However, consistent with previous studies, brefe
29 ed the abundance of FIB (Total coliforms and E. coli) and the Bacteroidales (HF183 marker) with bacte
30 of functional traits in N. meningitidis and E. coli Our study indicates that the expression of NMB04
31 samples in seven of 15 (46.7%) patients, and E. coli was found in both samples in three of 15 (20%) p
32 Eases tend to target modified DNA sites, and E. coli Mrr activity was previously shown to be elicited
36 Here, we designed a genetic screen around E. coli that identified high-affinity cytochrome bd oxid
38 that in the absence of chemical attractants E. coli exhibits a steady thermophilic response, the mag
39 Further, in a mixture of live and autoclaved E. coli cells our assay could detect only live cells.
40 0.6 J cm(-2) ) toward Gram-negative bacteria E. coli, making it a remarkably efficient optically medi
41 ugh activation by the Gram-negative bacteria E. coli, results in reduced NET production in FlnA-deple
43 two tractable genetic models, the bacterium E. coli and the nematode C. elegans, we performed three-
44 T4 in suppressing a model enteric bacterium (E. coli K-12) in mixtures with soil bacteria (Pseudomona
46 ork identifies important differences between E. coli strains that cause persistent and transient mamm
47 expedite this method, we used bioluminescent E. coli in a simplified checkerboard assay to generate u
48 n rapidly and selectively differentiate both E. coli and S. aureus infections from sterile inflammati
49 nical amino acid 5-hydroxytryptophan in both E. coli and eukaryotes, enabling efficient site-specific
51 To contextualize ST131 within the broader E. coli population associated with disease, we used geno
54 uronidase (beta-glucur) are both produced by E. coli, while beta-glucosidase (beta-gluco) is produced
55 Chaperonin and cochaperonin, represented by E. coli GroEL and GroES, are essential molecular chapero
58 usceptibility of metabolically active cells (E. coli, B. subtilis, Enterococcus, P. aeruginosa and Sa
59 We detected escherichelin during clinical E. coli urinary tract infection (UTI) and experimental h
61 branes were tested against Escherichia coli (E. coli) and Bacillus subtilis (B. subtilis) by bacteria
62 l indicator bacteria (FIB) Escherichia coli (E. coli) and Enterococcus spp. were enumerated using cul
63 connected network motifs, Escherichia coli (E. coli) appears to favor crosstalk wherein at least one
65 cus aureus (S. aureus) and Escherichia coli (E. coli) species are abundant bacteria within the HDM mi
66 loped for the detection of Escherichia coli (E. coli) using the T7 bacteriophages engineered with lac
68 ns with each other and with total coliforms, E. coli, enterococci, and biochemical oxygen demand (Ken
70 tudies demonstrated that sialidase-dependent E. coli growth on mucin is enabled by Bacteroides EstA,
71 Subsequently, utilizing the RF1-depleted E. coli strain C321.DeltaA, we could produce mammalian s
72 Using this method, we were able to detect E. coli at the concentration of approximately 10(5) CFU/
73 he prepared sensor has the ability to detect E. coli with a recovery of 81-97% in e.g. river water.
75 ognition and statistical tools, to determine E. coli susceptibility within a few minutes to different
76 high selectivity and was able to distinguish E. coli when present together with competing bacterial s
81 n yield between three genetically engineered E. coli strains was successfully evaluated using SERS an
82 veral pathogens, including enterohemorrhagic E. coli The mechanisms that allow pathogens to target th
83 gregative Escherichia coli, enteropathogenic E. coli, and enterotoxigenic E. coli), 137 (94.5%) follo
84 f phenotypic variability in enteropathogenic E. coli (EPEC), an important human pathogen, both in vir
86 nteropathogenic E. coli, and enterotoxigenic E. coli), 137 (94.5%) follow-up tests and 101 (95.3%) pa
87 We applied this strategy to two essential E. coli enzymes: the branched-chain aminotransferase BCA
88 s with alkynyl side chains display excellent E. coli DNA topoisomerase I inhibition properties with I
89 e developed methodology was then applied for E. coli quantification in water samples using nanomateri
92 ave important physiological implications for E. coli and significantly expand the self-regulating cap
95 s first demonstrated for a community of four E. coli double auxotrophic mutants and is then applied t
98 ormed between sigma(70) RNAP holoenzyme from E. coli and the T7A1 promoter, as well as to observe the
99 Finally, a homologue of lymphostatin from E. coli O157:H7 (ToxB; L7095) was also found to possess
101 and optimisation of HBc particle yield from E. coli is required to improve laboratory-scale producti
102 etic features of bla KPC emergence in global E. coli, 2008-2013, using both long- and short-read whol
103 mples are incubated with beta-glucuronidase (E. coli K12) and then analyzed by liquid chromatography-
104 e food contaminant Escherichia coli O157:H7 (E. coli O157:H7) in complex food products due to the rec
105 5 gal, and 2 gal filters, respectively, had E. coli concentrations of <1 colony-forming unit/100 mL.
111 e glutamate is the major monovalent anion in E. coli, these results suggest that SSB likely binds to
112 gene (oxyBAC) present in this gene array in E. coli resulted in formation of BDMA from BACs at a rat
115 a typhimurium InvA gene sequences (cloned in E. coli and after 30-cycle PCR) with SYBR((R)) Green I f
116 and Phe, respectively) but not conserved in E. coli OtsA (His, Leu, and Asp, respectively), providin
117 1295 treatment reduced plasma LPS content in E. coli-challenged baboons, implying reduced complement-
119 strand mismatches occurs bi-directionally in E. coli and that, while all MutS-recognized mismatches h
120 to-deoxyoctulosonate (Kdo)-lipid A domain in E. coli was necessary to facilitate chemical structure a
122 te favorable properties as potential EPIs in E. coli cells including the ability to penetrate the out
123 show that the CopA chaperone is expressed in E. coli from the same gene that encodes the transporter.
125 ded a 64.9 kDa protein that was expressed in E. coli, and purified with Ni-NTA agarose affinity chrom
129 rexpressing Escherichia coli pxpABC genes in E. coli increased 5-oxoprolinase activity in lysates >/=
130 e orthogonal and highly inducible by 3-HP in E. coli (12.3- and 23.3-fold, respectively) and Cupriavi
131 igated proteome-wide protein interactions in E. coli and HeLa cell lysates, respectively, identifying
133 acts with palmitoleic acid, a major lipid in E. coli Last, in Salmonella enterica, ubiK was required
136 E. coli; and sorbitol, accumulating only in E. coli None accumulated in mammalian cells or heat-kill
137 the entire T. denticola LicCA-Cpt pathway in E. coli resulted in phosphatidylcholine biosynthesis.
139 e various oxidative stress combat players in E. coli, ubiquinone acts as the cell's first line of def
141 sylated RSV G protein ectodomain produced in E. coli (in presence and absence of oil-in-water adjuvan
144 In this study, RAC and PAC were produced in E. coli, and chromatographically purified, then chemical
146 -selective photo-cross-linking reactivity in E. coli when placed at an appropriate site at the protei
149 that the highly conserved Tyr-86 residue in E. coli TrmD is essential to discriminate between 3',5'-
151 proposed that in fact the majority of TCR in E. coli is catalyzed by a second pathway ("backtracking-
153 ation in Pseudomonas sp. compared to that in E. coli is due to the dilution effect of different pathw
155 ous proteins interacting with thioredoxin in E. coli cells, allowing for mass spectrometric identific
156 systems support conjugative DNA transfer in E. coli and trigger P. aeruginosa T6SS killing, but not
157 te colicin sensitivity and iron transport in E. coli Numerous sRNA interactions were also identified
158 tracer of LPS biosynthesis and transport in E. coli We propose that our findings will be helpful for
160 ota, which leads to overgrowth of indigenous E. coli and facilitates colonization by opportunistic pa
161 T4 was more effective than PEf1 in infecting E. coli K-12 in pure cultures, PEf1 was 20-fold more eff
162 the wca operon caused a persistent-infection E. coli strain to become sensitive to complement-mediate
165 ent metalloenzymes revealed that it inhibits E. coli class II fructose bisphosphate aldolase, but not
166 C D-amino acids for their incorporation into E. coli in culture, we identified D-methionine as a prob
168 sults show that chicken cathelicidin-2 kills E. coli by permeabilizing the bacterial inner membrane a
170 Amongst 43/45 successfully sequenced bla KPC-E. coli strains, we identified substantial strain divers
173 rsion of the polycation was observed to make E. coli cells more susceptible to other quaternary ammon
174 nstructed directed assemblies of the 4.6 Mb E. coli genome, 48.5 kb lambda genome, and a representa
175 e comparative gene expression profile of MDR E. coli 381 and the reference human strain E. coli ATCC
176 al information about the highly virulent MDR E. coli strain of poultry origin and warrant further inv
177 g samples with 10(3), 10(4) and 10(5) CFU/mL E. coli O157:H7 were 106.98, 96.52 and 102.65 (in yogurt
178 EcoCyc now supports running and modifying E. coli metabolic models directly on the EcoCyc website.
181 ith differences in clustering between native E. coli receptors, with the TM sequence of better-cluste
182 NFs inhibited growth of model Gram-negative (E. coli) and Gram-positive (S. aureus) bacteria to a gre
185 y inhibit macrophage activation by nonviable E. coli In total, this study shows that cathelicidins do
187 sensor was developed based on the ability of E. coli O157:H7 proteases to change the optical response
190 e-determining step in the catalytic cycle of E. coli dihydrofolate reductase is tetrahydrofolate (THF
192 mical immunosensor for specific detection of E. coli O157:H7 contamination with the use of sandwich a
195 cholera toxin, or heat-stable enterotoxin of E. coli (STa toxin), with IC50 down to approximately 5 n
196 these findings suggest that the frequency of E. coli lineages in invasive disease is driven by negati
197 of aluminum foil on the UVC inactivation of E. coli bacteria and demonstrate a new radiation protect
201 esource for future computational modeling of E. coli gene regulation, transcription, and translation.
202 nome-scale metabolic reconstructed models of E. coli, calculating essential genes and comparing with
203 rect evidence for Min oscillation outside of E. coli and have broader implications for Min-system fun
204 tion, without affecting host phagocytosis of E. coli RA101295 treatment reduced plasma LPS content in
207 amate residue in the transmembrane region of E. coli TatC, which when modified by DCCD interferes wit
214 a systematic 11-yr hospital-based survey of E. coli associated with bacteremia using isolates collec
217 wt % led to a reduction in the transport of E. coli O157:H7 and K12 from 98 to 10% and from 95 to 70
218 we analyse the impact of MCR-1 expression on E. coli morphology, fitness, competitiveness, immune sti
221 t, in animals colonized at P2 but not at P9, E. coli K1 bacteria gain access to the enterocyte surfac
225 te almost completely retained the pathogenic E. coli in the subsurface, suggesting that utilizing san
229 samples than the blaNDM- and mcr-1-positive E. coli, indicating a substantial segment of unseen resi
231 and oxidative stress, in which 3MST protects E. coli against oxidative stress via l-cysteine utilizat
232 Hinokiflavone also inhibited a purified, E. coli expressed SUMO protease, SENP1, in vitro, indica
237 cin was performed on 649 multidrug-resistant E. coli clinical isolates collected between 2011 and 201
238 n of omega and its role in assembly of RNAP, E. coli mutants lacking rpoZ (codes for omega) are viabl
239 /stromal cells reduce the severity of rodent E. coli-induced acute respiratory distress syndrome.
243 e DNA polymerase III holoenzyme in a stalled E. coli replisome can directly bypass a single cyclobuta
244 R E. coli 381 and the reference human strain E. coli ATCC 25922 was completed with Illumina HiSeq.
245 4 was slightly more effective in suppressing E. coli in these planktonic mixed cultures, even though
246 f1 was 20-fold more effective in suppressing E. coli under simulated multispecies biofilm conditions
249 ould enhance neonatal resistance to systemic E. coli K1 infection via promoting maturation of neonata
251 Importantly, it is also demonstrated that E. coli bacteremia initiated from translocation across t
252 Using a microfluidic approach, we find that E. coli cells respond to the gradient of chemoattractant
253 Using a metabolomics approach, we found that E. coli and other Enterobacteriaceae expressing the Yers
256 k, providing the molecular basis for how the E. coli replisome can maintain high processivity and yet
258 erial prion-like protein (RepA-WH1) into the E. coli releasing factor RF1 promotes its aggregation an
261 T (K d 11 nM) is comparable to that of the E. coli cysteine synthase complex (K d 6 nM), and both
262 ntity, respectively; de novo assembly of the E. coli genome from raw reads yielded a single contig co
263 perator site in the regulatory region of the E. coli GUS operon is identified, and structure-guided G
264 experiments show that the acidic tip of the E. coli Hfq CTD transiently binds the basic Sm core resi
266 scopy (CoSMoS) to follow the exchange of the E. coli replicative DNA polymerase Pol IIIcore with the
269 randomly mutagenized by error-prone PCR the E. coli dsbB gene and selected dsbB mutants that confer
272 Ms are thinner hydrophobic bilayers than the E. coli OMs, which is expected from the difference in th
273 Together, our results demonstrate that the E. coli adhesin MAM(HS) facilitates retention of a gut c
274 Previous results had suggested that the E. coli replicase might play a role in lesion bypass, bu
276 Our results support a model in which the E. coli clamp loader actively opens the beta-sliding cla
278 r intramuscularly or intramammarily with the E. coli P4 were submitted to a homologous mastitis chall
280 Importantly, the inhibitory effects of 42 to E. coli betaG was reduced as the pH decreased due to the
281 how interspecies competition contributes to E. coli suppression without the confounding effects of r
284 h graphene based capacitors were specific to E. coli O157:H7 strain with a sensitivity as low as 10-1
287 gnotobiotic larvae inoculated with wild-type E. coli reduced midgut oxygen levels below 5%, whereas l
288 ediated immunity is the key to understanding E. coli vaccine-induced protection of the mammary gland.
291 ion has the potential to allow the versatile E. coli system to be employed as an exciting new carbon
292 is able to reduce total cell numbers, viable E. coli remained and expressed genes that enable surviva
293 to OMCCs from the A. tumefaciens VirB/VirD4, E. coli R388 Trw, and Bordetella pertussis Ptl systems s
294 concentrations in P. ruminicola 23, whereas E. coli and Salmonella spp. responses to excess nitrogen
296 ing S. aureus and B. anthracis compared with E. coli Alveolar macrophages and CD14(+) cells were over
297 o decay and a longer half-life compared with E. coli DSM1103 (6.64 +/- 0.63 h and 2.85 +/- 0.46 min v
298 ted sensor was reduced after incubation with E. coli K-12 cultures, with the reduction level increase
299 els below 5%, whereas larvae inoculated with E. coli mutants defective for cytochrome bd oxidase did
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