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1 r stability and cleavage by an endonuclease (EcoRI).
2  three restriction enzymes (BsoBI, XhoI, and EcoRI).
3 ferent from that of the related endonuclease EcoRI.
4 igated and compared with a previous study on EcoRI.
5 ch greater dependence on osmotic stress than EcoRI.
6  sequence discrimination of substrate DNA by EcoRI.
7  .39 for HindIII, .04 for BamHI, and .02 for EcoRI.
8 ation of the circular SV40 genomic DNAs with EcoRI.
9 ontaining scaffold to M13mp7L2 linearized by EcoRI.
10               M.XmnI is loosely related to M.EcoRI.
11 eters for the cleavage reaction catalyzed by EcoRI.
12  adducts appeared to inactivate or sequester EcoRI.
13 -open were cleaved poorly, or not at all, by EcoRI.
14                                            M.EcoRI, a bacterial sequence-specific S-adenosyl-L-methio
15  is part of, or immediately adjacent to, the EcoRI active site and which is conserved in the distantl
16 nd PCR amplification was carried out with an EcoRI adaptor-specific primer labelled with fluorescent
17           In contrast, similar analysis of M.EcoRI, an adenine N6 DNA methyltransferase, shows an ave
18 n directing sequence-specific DNA binding by EcoRI and are also crucial in assisting site discriminat
19 y shift assays applied to the DNA binding of EcoRI and BamHI restriction endonucleases.
20                                              EcoRI and BamHI restriction fragment patterns indicated
21        Molecular Dynamics simulations on DNA-EcoRI and DNA-EcoRV complexes suggest that the DNA withi
22 otected supercoiled plasmid from cleavage by EcoRI and DraI enzymes at their respective restriction s
23                                       BamHI, EcoRI and EcoRV endonucleases all have different context
24 ctive ecoRVR gene between the cloning sites (EcoRI and HindII or NotI) permits the positive selection
25                               We also report EcoRI and HindIII polymorphisms that may prove to be use
26  project, two whole-genome restriction maps (EcoRI and HindIII) of R. sphaeroides strain 2.4.1 were c
27 n with the restriction enzymes BamHI, BglII, EcoRI and KpnI increased the efficiency of linearized pl
28 R products were then digested with PvuII and EcoRI and ligated into a vector which had this same regi
29 terize the cognate and star site activity of EcoRI and MfeI and demonstrate genome-wide decreases in
30 ective primers were examined, and one, using EcoRI and MseI with additional selective TC bases on the
31 enomic DNAs were digested with endonucleases EcoRI and MseI, site-specific adaptors were ligated, and
32 n of about 4-fold resulted from catalysis by EcoRI and other proteins.
33 tivity by type II restriction enzymes BamHI, EcoRI and SalI, and inhibition was confirmed through the
34 th studies of more orthodox enzymes, such as EcoRI and some other type II restriction enzymes.
35            AFLP marker genotyping, using the EcoRI and TaqI restriction enzymes, provided an effectiv
36 esidues identified, 11 are conserved between EcoRI and the isoschizomer RsrI (which shares 50% identi
37  classes of DNA sites: specific, miscognate (EcoRI*) and non-specific.
38 that EcoRV bends DNA sharply, whereas BamHI, EcoRI, and DNaseI do not.
39 vage by HindIII was enhanced, whereas BamHI, EcoRI, and DNaseI were largely unaffected.
40 sing different restriction enzymes (HindIII, EcoRI, and MboI, respectively), were evaluated with a se
41 s digested with the restriction endonuclease EcoRI, and restriction fragment length polymorphisms wer
42 haromyces was digested with the endonuclease EcoRI, and the resultant fragments were separated by ele
43 currence of Class I SSRs in end-sequences of EcoRI- and HindIII-digested BAC clones was one SSR per 4
44 cket is achieved by biotinylating the mutant EcoRI at the mutation site.
45 on Tn5 mutagenesis and subcloned as a 2.0-kb EcoRI-AvaI fragment.
46   There is also a weaker correspondence with EcoRI, BamHI, and Cfr10I.
47            Restriction endonucleases such as EcoRI bind and cleave DNA with great specificity and rep
48 e show that at the cognate sequence (GAATTC) EcoRI binding releases about 70 fewer water molecules th
49 of a splay in the G(4)-C(9) base pair of the EcoRI binding site and a potential pocket of flexibility
50                    The high affinity for the EcoRI binding site exhibited by this mutant endonuclease
51 erred by different flanking sequences on the EcoRI binding site.
52 creased end-to-end distance resulting from M.EcoRI binding, mediated by a mechanism novel for DNA met
53  cation concentration dependence of K(A) for EcoRI binding.
54 how a prototypical restriction endonuclease, EcoRI, binds to the DNA target sequence--GAATTC--in the
55 t with levels of restriction site avoidance, EcoRI, but not EcoRV, cleaves self-DNA at a measurable r
56 on of an exogenous restriction endonuclease, EcoRI, but not to UV irradiation.
57 te that the site-specific restriction enzyme EcoRI can be conjugated to 20-nm fluorescent nanoparticl
58  absence of Cu(2+), the Mg(2+)-dependence of EcoRI catalysis shows positive cooperativity, which woul
59                                 In contrast, EcoRI caused prolonged cell-cycle arrest of recombinatio
60 n this mutant (SK1) was carried on a 10.6-kb EcoRI chromosomal DNA fragment.
61 (1344 bp) genes were identified on an 8.2 kb EcoRI chromosomal fragment.
62     Sequence analysis of a 6.7-kilobase pair EcoRI-ClaI genomic clone revealed a single open reading
63 restriction endonuclease analysis (REA) with EcoRI clustered the U.S. and European isolates into two
64                                              EcoRI complexation with nonspecific DNA releases substan
65  of DNA adducts and the crystal structure of EcoRI complexed to substrate suggest a model to explain
66  the absence of cofactor magnesium ions, the EcoRI conjugates bind to specific sequences on double-st
67 rence in hydration changes by both BamHI and EcoRI could be attributed to these dissimilar secondary
68                           When HindIII-X and EcoRI-D primer sets were used, CMV DNA from PBLs was a m
69  also subjected to Southern blot analysis of EcoRI-digested genomic DNA using the same full-length HT
70 otides were used to probe a Southern blot of EcoRI-digested HI689 genomic DNA.
71  of P1 cleavage sites in pBR322, achieved by EcoRI digestion after the original P1 attack, showed an
72                                              EcoRI digestion of the purified lambda DNA released a 5.
73 (8.2 kb and 10 kb respectively) generated by EcoRI digestion of total plasmid DNA.
74  with 5-azadeoxycytosine restored the normal EcoRI digestion pattern of wt1 in these cells indicating
75 ggesting that direct transfer contributes to EcoRI dissociation.
76 viously characterized specificity-enhanced M.EcoRI DNA adenine methyltransferase mutant suggest a clo
77 ctional gene was localized to a 2.15-kb SacI-EcoRI DNA fragment containing an open reading frame of 5
78                         A cloned 6.0-kb BclI-EcoRI DNA fragment expresses a 120-kDa B. henselae prote
79 nas sp. strain ADP cosmid library as a 25-kb EcoRI DNA fragment in Escherichia coli.
80                       The target adenine for EcoRI DNA methyltransferase (GAATTC) was replaced with 2
81 ingle site within the sequence recognized by EcoRI DNA methyltransferase (GAATTC).
82       We describe the characterization of an EcoRI DNA methyltransferase mutant in which histidine 23
83 ), k(off), and k(on)) was determined for the EcoRI DNA methyltransferase under noncatalytic condition
84                                              EcoRI DNA methyltransferase was previously shown to bend
85 rgetics and kinetics of base flipping by the EcoRI DNA methyltransferase were investigated by two met
86             Our investigation focuses on the EcoRI DNA methyltransferase which transfers a methyl gro
87 ding and base flipping were examined for the EcoRI DNA methyltransferase.
88 itatively rank the stability of bonds in the EcoRI-DNA complex.
89        We find that the dissociation rate of EcoRI-DNA-specific complexes at 80 mM NaCl depends on th
90 ith recent crystal and NMR structures of the EcoRI dodecamer, where an overall bend of seven degrees
91 ributable, at least in part, to diffusion of EcoRI(E111Q) away from its recognition site.
92            We show that a protein roadblock (EcoRI(E111Q), a hydrolytically defective form of EcoRI e
93 ead or head-to-tail orientations, as well as EcoRI(E111Q), lac repressor and even nucleosomes.
94  and SgrAI) and six one-site enzymes (BamHI, EcoRI, EcoRV, HaeIII, HindIII, and DNaseI).
95 okI, BglI, BglII, PvuII, SfiI, BssSI, BsoBI, EcoRI, EcoRV, MspI, and HinP1I were subjected to oxidizi
96 inding constants of the restriction nuclease EcoRI enable us to determine the diffusion rate of nonsp
97                           Two mutants of the EcoRI endonuclease (R200K and E144C) predominantly nick
98                          The contact between EcoRI endonuclease and the "primary clamp" phosphate of
99  the dissociation rate of specifically bound EcoRI endonuclease and the ratio of non-specific and spe
100                             The N-termini of EcoRI endonuclease are essential for tight binding and c
101 rameters governing cleavage of pBR322 DNA by EcoRI endonuclease are highly sensitive to ionic environ
102                                  Analysis of EcoRI endonuclease expression in vivo revealed that, in
103                                              EcoRI endonuclease has two tryptophans at positions 104
104 2+) coordinates to histidine residues in the EcoRI endonuclease homodimer bound to its specific DNA r
105              Galactose-induced expression of EcoRI endonuclease in rad50, mre11, or xrs2 mutants, whi
106                                          The EcoRI endonuclease is an important recombinant DNA tool
107                     The N-terminal region of EcoRI endonuclease is essential for cleavage yet is invi
108  We have isolated temperature-sensitive (TS) EcoRI endonuclease mutants (R56Q, G78D, P90S, V97I, R105
109                            Expression of the EcoRI endonuclease mutants in the absence of the EcoRI m
110     A direct competition experiment with the EcoRI endonuclease shows the methyltransferase to be sli
111  the atomic force microscope (AFM), a mutant EcoRI endonuclease site-specifically bound to DNA.
112 , we have exploited "promiscuous" mutants of EcoRI endonuclease to study the detailed mechanism by wh
113                A single-step purification of EcoRI endonuclease using a sequence-specific DNA column
114           We have studied the interaction of EcoRI endonuclease with oligonucleotides containing GAAT
115 I(E111Q), a hydrolytically defective form of EcoRI endonuclease) placed on the helix between the two
116 usion proteins with staphylococcal nuclease, EcoRI endonuclease, beta-globin, and luciferase.
117 late Tel1 activation after expression of the EcoRI endonuclease, which generates "clean" DNA ends.
118 uence, and no change in energy transfer with EcoRI endonuclease, which leaves this sequence unbent.
119 ion X-ray crystal structure of the wild-type EcoRI endonuclease-DNA complex revealed that: (1) the TS
120 ncreased recombination and suppressed HO and EcoRI endonuclease-induced killing of rad50 strains.
121                           Promiscuous mutant EcoRI endonucleases produce lethal to sublethal effects
122 s method uses cellular DNA digested with the EcoRI enzyme and the restriction fragment length polymor
123 gene and a universal primer pair followed by EcoRI enzyme digestion.
124 1A gene is included entirely within a 6.4-kb EcoRI fragment and comprises two coding exons separated
125 here the cloning and mapping of this 21.5 kb EcoRI fragment and it was shown to complement each of th
126                           Sequencing of this EcoRI fragment confirmed that HGPRT and XPRT were organi
127                                     A 6.8-kb EcoRI fragment containing all but the 5' end of cfpA was
128 Southern hybridizations to identify a 4.6-kb EcoRI fragment containing the complete xynA gene.
129                                          The EcoRI fragment contains 13 kb of DNA that is specific to
130 7% sensitivity with primer pairs directed to EcoRI fragment D, 32% sensitivity with primer pairs dire
131                             A 3.1-kb HindIII-EcoRI fragment found in both cosmids was shown to fully
132 6.5' promoter, have been subcloned on a 20kb EcoRI fragment from Kohara phage 19D1.
133 the 4.29 kb SspI fragment and an overlapping EcoRI fragment from one end of the inverted repeat, whil
134 e resulting phagemids revealed that a 0.5-kb EcoRI fragment hybridized with the F11 probe.
135 l 11p15.5 breakpoint which disrupts a 7.8 kb EcoRI fragment in all three of the delta t(X;11) chromos
136                        Cloning of the 0.5-kb EcoRI fragment into the E. coli-streptococcal insertion
137       These results indicate that the 0.5-kb EcoRI fragment is part of an adhesin-relevant locus that
138                                    The 10 kb EcoRI fragment localized to lp28-1 and was subsequently
139                                   The 1.0 kb EcoRI fragment of IFG elements codes for the 3' half of
140 d from a 5.8-kb BamHI fragment and an 8.0-kb EcoRI fragment of strain J45 genomic DNA.
141                                    A 4074-bp EcoRI fragment of Streptococcus salivarius ssp. thermoph
142 e TnphoA insertions were mapped to a 21.5 kb EcoRI fragment of the O139 chromosome.
143   Southern blot hybridization of a 827-bp 3' EcoRI fragment of the TAL-H cDNA to human-mouse somatic
144 sfection of plasmids containing the EK or JK EcoRI fragment or a 3-kb plasmid with the UL34.5 gene of
145  fragment revealed that the presence of this EcoRI fragment resulted from an inability of this enzyme
146 y(dG-dC) polynucleotides and to a 400-bp DNA EcoRI fragment resulted in a shift in the fragment size
147         Further subcloning of a 148 bp BamHI/EcoRI fragment resulted in the strongest in vitro DNA re
148               This sequence contains a 55-kb EcoRI fragment that is also present in all but four deri
149 nd 5590 possessed insertions within a 5.0 kb EcoRI fragment that is not contiguous with the exoenzyme
150      Six mini-Tn 10 insertions in the 3.7 kb EcoRI fragment were recombined into the L. pneumophila c
151 ural gene resides within a 7.4-kilobase SalI-EcoRI fragment with four exons corresponding to amino ac
152 cted in vitro by deleting an internal 1.4-kb EcoRI fragment, did not show blue-staining sectors.
153 d with HGPRT within a 4.3-kilobase pair (kb) EcoRI fragment, implying that the two genes arose as a r
154 c endogenous MCF virus env-containing 4.6-kb EcoRI fragment.
155 tural gene from a lambda library as a 5.1-kb EcoRI fragment.
156 mutants with a plasmid containing the 3.7 kb EcoRI fragment.
157               We placed the exons on genomic EcoRI fragments and identified their flanking intronic s
158                                              EcoRI fragments containing Tn5 flanking sequences from t
159 ide probe.A Lambda ZAP II library containing EcoRI fragments of L. kirschneri DNA was screened, and a
160           A Lambda-Zap II library containing EcoRI fragments of Leptospira kirschneri DNA was screene
161           A Lambda-Zap II library containing EcoRI fragments of Leptospira kirschneri DNA was screene
162        The Type II restriction enzymes (e.g. EcoRI) gave rise to recombinant DNA technology that has
163                                     A 3.7 kb EcoRI genomic fragment containing the 700 bp DD-PCR prod
164                                              EcoRI genomic fragments containing ERG3 from the Dar-1 a
165                  This was accomplished using EcoRI (Gln-111), a mutant of the restriction enzyme that
166  have been mapped in the DNA sequence of the EcoRI-H and -Dhet fragments of B95-8 Epstein-Barr virus.
167  8 to 20 bands, when hybridized to EcoRI- or EcoRI-HaeIII-digested DNA of independent C. tropicalis i
168                             Interestingly, M.EcoRI has an intercalation motif observed in the FPG DNA
169 ivity with engineered high-fidelity variants EcoRI-HF and MfeI-HF, as well as quantify the influence
170 rent from those of ESRVs upon digestion with EcoRI, HindIII, NdeI, KpnI, and ScaI.
171 anogen bromide-activated Sepharose 4B) binds EcoRI in the absence of Mg2+ and elutes when Mg2+ is app
172  positive cooperativity, which would enhance EcoRI inactivation of foreign DNA by irreparable double-
173 exon 3 of HPRT: The enzymes BamHI, BglII and EcoRI increased the illegitimate integration efficiency
174 ly, rad52 mutants were not more sensitive to EcoRI-induced cell killing than wild-type strains.
175                                   Continuous EcoRI-induced scission of chromosomal DNA blocked the gr
176 ficient for EcoRI of 3 x 10(4) bp(2) s(-)(1) EcoRI is able to diffuse approximately 150 bp, on averag
177 expectedly, Mg(2+)-catalyzed DNA cleavage by EcoRI is profoundly inhibited by Cu(2+) binding at these
178     This distortion of DNA conformation by M.EcoRI is shown to be important for sequence-specific bin
179 lthough the method described is specific for EcoRI, it can be readily modified for the purification o
180 gated: seven enzymes with a single cut site (EcoRI, KpnI, NdeI, NotI, NruI, SmaI, XbaI), two enzymes
181 -bp G217B yps 21:E-9 probe or 512-bp HindIII-EcoRI-labelled Downs yps21:E-9).
182 nts were generated by partial digestion with EcoRI (library segments 1--4: 24-fold) and MboI (segment
183 firomycins 6 and 13 efficiently cross-linked EcoRI-linearized pBR322 DNA upon addition of Et3P.
184                                              EcoRI mapping of a dense set of overlapping clones valid
185                                     NotI and EcoRI mapping of the overlapping cosmids, hybridization
186 erichia coli DNA despite the presence of the EcoRI methylase.
187 I endonuclease mutants in the absence of the EcoRI methyltransferase induces the SOS DNA repair respo
188                       Some clustering of the EcoRI/MseI AFLP markers was observed, possibly in centro
189  are AFLP products generated from either the EcoRI/MseI or PstI/MseI enzyme combinations.
190                             We utilized both EcoRI/MseI- and EcoRI/PstI-digested genomic DNA to gener
191 h a bending-impaired, enhanced-specificity M.EcoRI mutant show minimal differences with the cognate D
192 es that is not digested with enzymes such as EcoRI, NlaIII, and SphI.
193  solution and solid-state NMR studies of the EcoRI nuclease target sequence, and solid-state NMR stud
194     We calculate a diffusion coefficient for EcoRI of 3 x 10(4) bp(2) s(-)(1) EcoRI is able to diffus
195 t and control DNA samples were digested with EcoRI or PstI and Southern-hybridized with the DMP1, DMP
196            MLST was more discriminatory than EcoRI or PvuII ribotyping and provided subtype data with
197 containing 8 to 20 bands, when hybridized to EcoRI- or EcoRI-HaeIII-digested DNA of independent C. tr
198                       Binding preference for EcoRI* over non-specific DNA is also improved.
199                                     Based on EcoRI plasmid profiles (PP), two types, PP-11 and PP-13,
200 d with restriction enzymes ApaI plus TaqI or EcoRI plus MseI.
201                          The presence of the EcoRI polymorphic site results in a 3.7-kb band, and its
202        FAFLP with an unlabelled nonselective EcoRI primer (Eco+0) and a labelled selective MseI prime
203                                        The M.EcoRI protein sequence is poorly accommodated into well
204 terns produced by three restriction enzymes, EcoRI, PstI, and HindIII.
205             We utilized both EcoRI/MseI- and EcoRI/PstI-digested genomic DNA to generate AFLP bands a
206 ups, conserved in the active sites of EcoRV, EcoRI, PvuII, and BamHI endonucleases, suggests that lig
207                          Of the 12 resultant EcoRI-PvuII combination types, only 4 contained multiple
208 both association and catalytic phases of the EcoRI reaction, acting to change the specificity of the
209 nced by using a detector probe containing an EcoRI recognition sequence at its 5'-end that is not hom
210                The presence of M(1)dG in the EcoRI recognition sequence impaired the ability of the e
211 as homologous templates, for insertion of an EcoRI recognition site at the RIF1 locus and introductio
212 double (pGEM-luc and pSV-beta-galactosidase) EcoRI recognition sites were imaged, and the bound enzym
213 tions of the local, internal dynamics in the EcoRI restriction binding site, -GAATTC- induced by cyti
214  created a fluorescent marker using a mutant EcoRI restriction endonuclease (K249C) that enables prol
215                              We employed the EcoRI restriction endonuclease as a model for the intera
216 dated by confirming that DNA cleavage by the EcoRI restriction endonuclease causes inversion of confi
217                              Purification of EcoRI restriction endonuclease to apparent homogeneity w
218 kb) bound to a slide surface was digested by EcoRI restriction endonuclease, and the resulting restri
219                                        Using EcoRI restriction endonuclease, we have shown that the b
220 uence is known to suppress hydrolysis by the EcoRI restriction enzyme.
221 generated from phage lambda by intracellular EcoRI restriction following infection.
222                                       A 1 kb EcoRI restriction fragment cloned from a band visible in
223 ndIII and tissue plasminogen activator (TPA) EcoRI restriction fragment length polymorphisms-based ge
224              From one cosmid clone, a 7.5 kb EcoRI restriction fragment, which reacted strongly with
225 strain NC92 have been isolated on an 11.0-kb EcoRI restriction fragment.
226 sis revealed 5.5- and 2.4-kb Mu1-hybridizing EcoRI restriction fragments in all of the male-sterile a
227      The rice-pathogenic strain contained 57 EcoRI restriction fragments that hybridize to the MGR586
228 on-specific probes to interrogate a detailed EcoRI restriction map of the region, ZNF genes were foun
229 n on a complete NotI and SalI, and a partial EcoRI restriction map.
230 with unpredicted HinfI RFLP, resulting in an EcoRI restriction site.
231 tural model for a DNA decamer containing the EcoRI restriction site.
232  genomic DNA in cells carrying the wild-type EcoRI restriction-modification system: (a) binding to Ec
233 ferent UGPase-cDNAs with BamHI, HindIII, and EcoRI revealed that at least two mRNA populations were p
234                                          The EcoRI ribotype diversity among bovine isolates (Simpson'
235                                         Some EcoRI ribotypes contained multiple serotypes; a subset o
236 x of discrimination [D] = 0.995) than either EcoRI ribotyping (D = 0.950) or AscI or ApaI single-enzy
237                                              EcoRI ribotyping differentiated 17 ribotypes, and DNA se
238                       Our data show that (i) EcoRI ribotyping, combined with hylB and sodA sequencing
239 re characterized by serotyping and automated EcoRI ribotyping.
240 e contig, we determined the locations of the EcoRI, SacII, EagI, and NotI restriction sites in the cl
241 ciencies severalfold, while Asp718, HindIII, EcoRI, SalI, SmaI, HpaI, MscI, and SnaBI do not.
242               Southern blot hybridization of EcoRI/SalI-digested DNA with Cp3-13 provides a fingerpri
243 ted diffusion processes, that occur prior to EcoRI sequence recognition and subsequent to DNA cleavag
244 arental pBR322, which contains only a single EcoRI sequence, ruling out slow release of the enzyme fr
245           RFLP analysis of cellular DNA with EcoRI showed that all three strains of S. boulardii had
246 5 map unit) was cloned and inserted into the EcoRI site (1.0 map unit) in the late region of simian v
247  and 8862, respectively) and to knock out an EcoRI site (A to G at nt 8880).
248 ct-1 contained both genes joined at a unique EcoRI site and expressed both activities.
249 from an inability of this enzyme to cut at a EcoRI site in intron 1 of wt1.
250 overlapping primers that recognized a unique EcoRI site in the SV40 genome.
251  average structure and B-factors; within the EcoRI site itself, the rms deviation between the average
252 istance gene derived from pMCIpol A into the EcoRI site located in exon 2.
253 extends for 3012 nucleotides from the single EcoRI site to beyond the PstI site in the 3' long termin
254 hat occur once the enzyme has arrived at the EcoRI site, are essentially insensitive to ionic strengt
255 not express wt1 were also methylated at this EcoRI site.
256      Semi-quantitative estimates of rates of EcoRI* site cleavage in vivo, predicted using the bindin
257           When wild-type protein binds to an EcoRI* site, it forms structurally adapted complexes wit
258  the consequences of inflicting DNA nicks at EcoRI sites in vivo.
259  a pBR322 variant bearing two closely spaced EcoRI sites is governed by the same turnover number as h
260 iate looping of a segment of Ins that brings EcoRI sites located at -623 and +761 bp (relative to the
261 st artificial chromosomes (YACs) at specific EcoRI sites located within or adjacent to sequence-tagge
262 nce in uncloned DNA between the two terminal EcoRI sites of a YAC insert was approximately 1 Mbp larg
263                            Thirteen pairs of EcoRI sites were targeted for double RARE cleavage in un
264 nts detected polymorphic HindIII, BamHI, and EcoRI sites.
265  from tighter binding and faster cleavage at EcoRI* sites (one incorrect base pair).
266                                       AAATTC EcoRI* sites are cleaved by A138T up to 170-fold faster
267 triction-modification system: (a) binding to EcoRI* sites is more probable than for wild-type enzyme
268 nity and elevated cleavage rate constants at EcoRI* sites makes double-strand cleavage of these sites
269 reater than those of the wild-type enzyme at EcoRI* sites.
270 mmary, these mutations provide insights into EcoRI structure and function, and complement previous ge
271 ication that these residues are critical for EcoRI structure and function.
272    The nucleotide sequence of a 7.0-kb EcoRV-EcoRI subclone was determined and found to contain open
273                         For proteins such as EcoRI that locate their specific recognition site effici
274                               The binding of EcoRI to cognate DNA was dominated by a dehydration of t
275  The binding of the restriction endonuclease EcoRI to DNA is exceptionally specific.
276 GAATTC, decreases the binding free energy of EcoRI to values nearly indistinguishable from nonspecifi
277 We measured the kinetics of DNA bending by M.EcoRI using DNA labeled at both 5'-ends and observed cha
278 e substrates (GAATTT, GGATTC) of wild type M.EcoRI using fluorescence resonance energy transfer and 2
279 cell cycling and lost viability rapidly when EcoRI was expressed.
280 r amplification (Ramp), S17C BamHI and K249C EcoRI, were conjugated to oligonucleotides, and immobili
281 enetically modified form of the endonuclease EcoRI which lacks cleavage activity but retains binding
282 etween complexes of the restriction nuclease EcoRI with nonspecific DNA and with the enzyme's recogni
283          Southern analysis revealed a 3.5 kb EcoRI wt1 fragment readily detectable in majority of mes
284  the cognate GAATTC site than does wild-type EcoRI yet displays relaxed specificity deriving from tig

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