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1 FISH analysis indicated that SOD knockdown moderately in
2 FISH analysis indicated the presence of Rickettsia bacte
3 FISH analysis revealed that the dominant anammox species
4 FISH and 3C should therefore give the same views of geno
5 FISH data are implemented in the revised International S
6 FISH directly visualizes the spatial relationship of seq
7 FISH sizes of SAR86 cells were at least threefold smalle
9 histochemistry 3+; 3 immunohistochemistry 2+/FISH amplified), whereas 7 were HER2- (3 immunohistochem
11 enome structures that are consistent with 3D FISH data and known knowledge about the human chromosome
12 onally, we confirmed by in situ analysis (3D-FISH [three-dimensional fluorescence in situ hybridizati
14 patient with childhood-onset melanoma had a FISH aberration compared with 4 patients with adult-onse
16 h a FISH ratio >/= 2.0, 1.3% (n = 35) with a FISH ratio >/= 2.0 despite a HER2 signal < 4.0, and 3.0%
17 verall, 11.8% (n = 339) were positive with a FISH ratio >/= 2.0, 1.3% (n = 35) with a FISH ratio >/=
19 error rates in the second round for both ALK FISH and ALK IHC, although the error rates were still hi
21 culating tumor cells (CTC) with aberrant ALK-FISH patterns [ALK-rearrangement, ALK-copy number gain (
24 coupled with tyramide signal amplification (FISH-TSA), that this gene is located in the distal regio
25 ngly paradoxical relationship between 3C and FISH, both in minimal polymer models with dynamic loopin
26 rine HoxD locus with 3C carbon copy (5C) and FISH in different developmental and activity states and
28 s indicate that cross-validation of Hi-C and FISH should be carefully designed, and that jointly cons
31 with chronic lymphocytic leukemia (CLL), and FISH results revealed presence of the CLL-associated del
35 ices (all of which are dependent on IGHV and FISH results) to all patients with newly diagnosed CLL.
36 atment effect was found for all ER, IHC, and FISH levels, except for the ER-positive/HER2 low FISH ra
39 ization, mate pair and cloned sequences, and FISH analyses, we have identified in multiple myeloma ce
44 rst application, to our knowledge, of BONCAT-FISH and BONCAT-FACS within an environmental context, we
47 u co-examination of chromosome aneuploidy by FISH and immunostaining of multiple biomarkers displayed
51 > cogain > polysomy > disomy) as detected by FISH, and evaluated on a semiquantitative scale (modifie
52 port the original categorizations of HER2 by FISH status in BCIRG/Translational Research in Oncology
53 d by Hi-C, and spatial distance, measured by FISH, are often assumed to quantify the same phenomena a
56 g, localization of specific DNA sequences by FISH, and high-resolution segregation of nuclear compart
60 ion fluorescence in situ hybridization (CARD-FISH), we show that only four novel clonal phylotypes we
61 This assay detected aberrant centromeric CO-FISH patterns consistent with sister chromatid exchange
62 e, superresolution imaging of centromeric CO-FISH using structured illumination microscopy implied th
64 tients (14.2%) who were initially considered FISH-equivocal (ratio < 2.0 with HER2 signal >/= 4.0, bu
65 s cost and time compared to the conventional FISH protocols and opens up new opportunities to investi
67 ted approach that involves biliary cytology, FISH, serologic testing and advanced imaging techniques
74 ng of an enigma as beyond low-resolution DNA FISH we do not have the appropriate tools to analyze the
76 A-FISH signals with both a corresponding DNA-FISH signal and an immunofluorescence signal for RNA pol
79 (FISH) using prespecified criteria and EGFR FISH-positive status was defined as high polysomy or amp
81 .78-1.27; p=0.96; respectively; and for EGFR FISH non-positive 1.00, 0.85-1.17; p=0.97; and 1.03, 0.8
82 ogy regardless of EGFR FISH status (for EGFR FISH-positive 0.88, 0.68-1.14; p=0.34; and 0.99, 0.78-1.
84 linical trials in different settings in EGFR FISH-positive and, in particular, EGFR-amplified esophag
86 th non-squamous histology regardless of EGFR FISH status (for EGFR FISH-positive 0.88, 0.68-1.14; p=0
88 oup and 198 in the control group in the EGFR FISH-positive subpopulation, progression-free survival d
89 did not differ among patients who were EGFR FISH non-positive with squamous cell histology (HR 1.04,
91 gression-free survival in patients with EGFR FISH-positive cancer and overall survival in the entire
92 fied subgroup analyses of patients with EGFR FISH-positive squamous-cell carcinoma cancers are encour
94 FISH system capable of automating the entire FISH protocol which could be performed within a shorter
98 Here, we use whole-genome sequencing, fiber-FISH (fluorescence in situ hybridization), and other met
100 icrosatellite analysis, read depth and fibre-FISH to demonstrate that human amylase CNV is not a smoo
101 diversity detected by high-resolution fibre-FISH and conclude that extensive molecular analysis is r
103 sed fluorescence in situ hybridization (Flow-FISH) for IFN-gamma to multicolor flow cytometry that al
104 els of other cytokines, indicating that Flow-FISH helps identify the best cytokine producers during T
107 f PNA probes over their DNA counterparts for FISH and indicate that P-Ca726 may be used advantageousl
108 the Mayo Clinic cytogenetics laboratory for FISH testing (n = 2,851; from November 2013 to October 2
117 . scoparia populations tested (GR1 and GR2), FISH results displayed a single and prominent hybridizat
122 ates five different groups according to HER2 FISH ratio and average HER2 gene copy number per tumor c
127 umber by fluorescence in-situ hybridisation (FISH) can identify patients most likely to benefit from
130 es using fluorescence in situ hybridization (FISH) and extended DNA fiber (Fiber FISH) on K. scoparia
132 es using fluorescence in situ hybridization (FISH) and growth in microfluidic drops demonstrate that,
134 ction is Fluorescence In Situ Hybridization (FISH) and while highly sensitive and specific, it is als
135 (3C) and fluorescence in situ hybridization (FISH) are two widely used technologies that provide dist
136 ion via a fluorescent in situ hybridization (FISH) assay, which can detect those rearrangements to a
137 (SKY) and fluorescent-in-situ hybridization (FISH) demonstrated coordinate localization and transloca
138 ly by 3D fluorescence in situ hybridization (FISH) experiments and show that active RNAPII is enriche
141 Sperm fluorescence in situ hybridization (FISH) for chromosomes X, Y, and 18 was used to determine
144 ule mRNA Fluorescence In Situ Hybridization (FISH) has been established as the standard method for th
145 (IHC) and fluorescent in situ hybridization (FISH) HER2 testing guidelines in 2007 (AC2007) and updat
146 xpansion, fluorescent in situ hybridization (FISH) imaging of RNA can be performed with high yield an
147 on using fluorescence in situ hybridization (FISH) in an additional 87 osteosarcomas, with IGF1 recep
148 ned with fluorescence in situ hybridization (FISH) in coastal waters of the west Antarctic Peninsula
149 stry and fluorescence in situ hybridization (FISH) in distinguishing PNs from childhood and adult-ons
153 ected on fluorescence in-situ hybridization (FISH) is an independent predictor for the development of
154 m (ISS), fluorescence in situ hybridization (FISH) markers, and gene expression (GEP) classifiers wer
157 ected by fluorescence in situ hybridization (FISH) of pancreatobiliary brush samples with UroVysion p
158 e either fluorescence in situ hybridization (FISH) or chromosome conformation capture (3C) methods.
160 ation, a fluorescence in situ hybridization (FISH) protocol was established to detect different viral
161 es, HER2 fluorescence in situ hybridization (FISH) ratio, and copy number results were available for
163 ule mRNA fluorescence in situ hybridization (FISH) reveals that, upon site-specific CTCF disruption o
165 rrently, fluorescence in situ hybridization (FISH) technique is routinely employed to detect HER2 amp
166 pment of fluorescence in situ hybridization (FISH) technologies enables the quantification of telomer
167 and (3) fluorescence in situ hybridization (FISH) testing for the amplification of the genetic locus
169 rmined by fluorescent in situ hybridization (FISH) using prespecified criteria and EGFR FISH-positive
170 erformed fluorescence in situ hybridization (FISH) using probes targeting CD274, PDCD1LG2, and the ce
172 then used fluorescent in situ hybridization (FISH) with 16S rRNA probes targeting most bacteria as we
173 Using fluorescent in situ hybridization (FISH) with riboprobes, we also observed that small-diame
174 ected by fluorescence in situ hybridization (FISH), an experimental technique especially well suited
175 tex, arc fluorescence in situ hybridization (FISH), and designer receptors exclusively activated by d
176 ry (IHC), fluorescent in situ hybridization (FISH), and mutation analyses were performed in 318 patie
177 analysis, fluorescent in situ hybridization (FISH), and RNA-seq to obtain comprehensive three-dimensi
178 targeted fluorescence in situ hybridization (FISH), enabling a direct link between taxonomic identity
179 ed by RNA fluorescent in situ hybridization (FISH), Northern blots, and RNA sequencing-implicates MRP
181 counting fluorescence in situ hybridization (FISH), we found that duty cycles of transcriptional burs
182 fluorescence imaging in situ hybridization (FISH)-based assay for the detection of duck hepatitis B
184 based on fluorescence in situ hybridization (FISH)-supplemented immunohistochemistry of biopsied tumo
187 In addition to ALK fusions identified by IHC/FISH in four cases, two previously known fusions involvi
189 nt subtraction enrichment and immunostaining-FISH (SE-iFISH), to detect a variety of aneuploid circul
191 >/=2 probes) were classified as positive in FISH with the UroVysion and pancreatobiliary probes.
194 ohesin SMC1A, and used four-color-interphase-FISH coupled with BrdU incorporation and analyses of sen
195 idize methane as indicated by stable isotope FISH-nanoSIMS experiments and (14)CH4 radiotracer rate m
196 sent FisHiCal, an R package for an iterative FISH-based Hi-C calibration that exploits in full the in
197 ysis of a sample processed using an off-line FISH protocol, the total analysis time was reduced from
198 levels, except for the ER-positive/HER2 low FISH ratio (>/=2 to <5) group (DFS: 3-way ITT Pvalue for
199 hat are ER-positive by IHC analyses with low FISH ratio (>/=2 to <5), or with higher ESR1 levels deri
201 we developed a new, integrated microfluidic FISH system capable of automating the entire FISH protoc
203 on at the single cell level: single molecule FISH (smFISH) and single cell qRT-PCR (or single cell RN
210 plied this approach to image single-molecule FISH in combination with immunofluorescence (smFISH-IF)
212 e, immunohistochemistry, RNA single-molecule FISH, long-term storage, and microscopy with cellular an
214 equencing combined with single molecule mRNA FISH identified the short and highly abundant mRNAs enco
216 wever, background-from off-target binding of FISH probes and cellular autofluorescence-can become lim
222 the measurement of the spatial separation of FISH probes flanking target genome regions of interest.
227 mproved effect of erlotinib, based on IHC or FISH for EGFR, or mutations in genes related to the EGFR
229 at high resolution with either 3C methods or FISH alone must be interpreted with caution and that vie
232 ed detection of polysomy by pancreatobiliary FISH (P < .001), a mass by cross-sectional imaging (P <
234 on cohort of brush samples, pancreatobiliary FISH identified samples from patients with malignancy wi
237 we report STAR-FISH (specific-to-allele PCR-FISH), a novel method for the combined detection of sing
240 acid-fluorescence in situ hybridization (PNA-FISH) probes, P-Ca726 (targeting a novel region of the r
242 evance: Immunohistochemistry and the 4-probe FISH melanoma analysis are not useful for distinguishing
245 e describe an optimized quantitative FISH (Q-FISH) protocol for measuring telomere length that bypass
246 Here we describe an optimized quantitative FISH (Q-FISH) protocol for measuring telomere length tha
256 encing, and at the single-cell level, by RNA-FISH, and is not attributable to differences in repressi
258 fluorescence in situ RNA hybridization (RNA-FISH) of the intron region of immediate early transcript
260 -cell flow cytometry and single-molecule RNA-FISH assays, we demonstrate that knocking down of CTCF o
264 ated these results by co-localization of RNA-FISH signals with both a corresponding DNA-FISH signal a
265 etween these possibilities, we performed RNA-FISH to detect nascent transcripts from multiple miRNA g
267 stems such as multiplex RNA imaging with RNA-FISH and multiplex protein imaging with antibody-stainin
270 ed protocols that exploit a highly sensitive FISH method based on branched DNA technology to detect m
271 RNA fluorescent in situ hybridization (smRNA FISH), we show that egl-1 is transcribed in the mother o
272 The implemented multi-threading software FISH is freely available for academic use at https://sit
273 o nanoscale secondary ion mass spectrometry (FISH-NanoSIMS), we directly measured (15)N2 uptake by AN
275 mere-fluorescence in situ hybridization (TEL-FISH) coupled with 3D imaging of buccal cell nuclei], pr
276 matic review is sufficient to recommend that FISH and IGHV be performed as standard clinical tests fo
282 ted by tREX have higher correlation with the FISH measurements than any of the comparison methods.
283 D structure from tREX is consistent with the FISH measurements, and the corresponding distances predi
285 ceptors, and we confirm the findings through FISH analysis of X and Y chromosomes in sex-discordant t
286 ethods may provide a suitable alternative to FISH as they are compatible with multiplexing and diagno
288 H-positive and 36 (1.3% overall) patients to FISH-negative, whereas 157 (5.5% overall) patients remai
289 be reassigned 212 (7.4% overall) patients to FISH-positive and 36 (1.3% overall) patients to FISH-neg
293 ar fluorescence in situ hybridization (viral FISH) analysis of environmental samples and confirmed by
294 mparison methods to a Hi-C dataset for which FISH measurements are available to evaluate estimation a
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