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1 FMN diffuses through outer membrane porins where it acce
2 FMN hydrolases catalyze dephosphorylation of FMN to ribo
3 FMN is positioned asymmetrically within the junctional s
5 s for NADH and the primary electron acceptor FMN, and it provides a scaffold for seven iron-sulfur cl
6 ites for NADH, the primary electron acceptor FMN, and seven iron-sulfur clusters that form a pathway
7 notable effects of mutations in the adjacent FMN domain on the heme structure in a human iNOS bidomai
11 ystal structures of two forms of CpsUbiX: an FMN-bound wild type form and an FMN-unbound V47S mutant
12 tic interactions of this triad can enable an FMN-NOSoxy interaction that is productive for electron t
14 eishmaniasis, Leishmania major, expresses an FMN-containing nitroreductase (LmNTR) that metabolizes a
15 d via gene duplication and acquisition of an FMN-binding domain now prevalent in TyW1 of most eukaryo
19 erminal domain of FbiB in apo-, F420-0-, and FMN-bound states, displaying distinct sites for F420-0 a
21 ely pre-folded tertiary RNA architecture and FMN recognition mediated by conformational transitions w
22 ond between the backbone amide of Asn537 and FMN N5, the anionic ionization state of the hydroquinone
24 like mammalian NOS that contain both FAD and FMN binding domains within a single polypeptide chain, b
25 lectron flow from NADPH, through the FAD and FMN cofactors, to the heme oxygenase domain, the site of
26 ming a salt bridge between the NADPH/FAD and FMN domains in the conformationally closed structure to
28 restingly, significant reductions in FAD and FMN levels were observed before the onset of degeneratio
30 contains a flavin reductase domain (FAD and FMN) and a catalytic heme oxygenase domain (P450-type he
34 tions that alternate between interflavin and FMN-heme electron transfer steps, structures of the holo
35 e observation that hydB contains NAD(P)+ and FMN binding sites, suggests that the hyd genes are speci
37 chain provide greater stability to the anti-FMN conformation that leads to a right-handed FMN helix.
38 Dihydroorotate dehydrogenases (DHODs) are FMN-containing enzymes that catalyze the conversion of d
39 al pi-pi alignment between the near-armchair FMN helix and the underlying nanotube lattice plays a cr
40 asing the extent of hydrogen bonding between FMN and a specific amino acid residue in the local prote
42 the semiquinone/hydroquinone couple of both FMN and FAD are altered to a larger extent than the oxid
43 he FMN-induced "turn-off" activities of both FMN riboswitches in Bacillus subtilis, allowing rib gene
45 of the isoalloxazine ring of an enzyme-bound FMN prosthetic group as a hydride, and an active site ba
51 The bridging interaction appeared to control FMN subdomain interactions with both its electron donor
55 ins clearly indicates that a properly docked FMN domain contributes to the observed L-Arg perturbatio
57 centrations of l-arginine (Arg), NADPH, FAD, FMN, tetrahydrobiopterin (BH4), and calmodulin, indicati
58 portant to experimentally determine the Fe...FMN distance to provide a key calibration for computatio
60 d riboflavin and the cognate flavocoenzymes, FMN and FAD, by in vitro biotransformation with better t
61 Similarly, unusually weak XplA flavodoxin FMN binding (K(d) = 1.09 muM) necessitates its purificat
62 centers in the [Fe(III)][FMNH(*)] (FMNH(*): FMN semiquinone) form of a human inducible NOS (iNOS) bi
63 assist phosphate-C1' bond breakage following FMN reduction, leading to formation of the N5-C1' bond.
71 s electron transfer from FAD to FMN and from FMN to heme by adjusting the relative orientation and di
74 hat carries the electrons one at a time from FMN to a coenzyme Q molecule bound in the vicinity of th
75 suggest a pathway for electron transfer from FMN to heme and a mechanism for calmodulin activation of
76 cular, the pathway of electron transfer from FMN to heme, and the mechanism through which calmodulin
78 d structural basis of electron transfer from FMN-hydroquinone to its partners, three deletion mutants
79 s increase with existing values for NAD(P)H4-FMN distances, based on charge-transfer complex absorban
82 es to further investigate how the changes in FMN domain conformational freedom impact the following:
84 atic SOD1 mice had a significant decrease in FMN survival compared with WT, which suggests an increas
85 ible alternative function of Acg proteins in FMN storage or sequestration from other biochemical path
87 eptor pathway is involved in axotomy-induced FMN death in WT and is partially responsible for the mSO
89 uropil surrounding the two different injured FMN populations contained distinct molecular differences
90 Regardless of their ultimate fate, injured FMNs respond with a vigorous pro-survival/regenerative m
91 Emerging evidence suggests that interdomain FMN-heme interactions are important in the formation of
92 tations and provided molecular insights into FMN-based control of gene expression in normal and ribof
94 on spectrum of CPR with that of the isolated FMN domain permitted identification of residues in the F
95 s a unique autoinhibitory insert (AI) in its FMN subdomain that represses nNOS reductase activities a
96 MtrC is significantly weaker than with known FMN-binding proteins, but identify a mildly preferred in
97 port, we describe the preparation of labeled FMN isotopologues enriched with (15)N and (13)C isotopes
98 evels of FMN are sufficient ("high levels"), FMN binding to FMN riboswitches leads to a reduction of
99 rs that form a pathway for electrons linking FMN to the terminal electron acceptor, ubiquinone, which
100 usters that form an electron pathway linking FMN to the terminal electron acceptor, ubiquinone, which
102 Presymptomatic mSOD1(G93A) mouse facial MN (FMN) are more susceptible to axotomy-induced cell death
104 anella oneidensis and flavin mononucleotide (FMN in fully oxidized quinone form) using computational
106 ) is the precursor of flavin mononucleotide (FMN) and flavin adenine dinucleotide, which are essentia
107 enzyme that converts flavin mononucleotide (FMN) and glutamate to 8-amino-FMN via the intermediacy o
109 non-covalently bound flavin mononucleotide (FMN) as cofactor, acquires its native alpha/beta paralle
111 he environment of the flavin mononucleotide (FMN) chromophore; in iLOV, the methyl group of Thr-394 "
112 -2 requires a reduced flavin mononucleotide (FMN) coenzyme to carry out this redox neutral isomerizat
113 tein and/or intrinsic flavin mononucleotide (FMN) cofactor are isotopically labeled with (2)H, (15)N,
115 turnover with NO are flavin mononucleotide (FMN) dependent, implicating an additional proton transfe
116 yl phosphate chain of flavin mononucleotide (FMN) induces a right-handed helix that enriches the left
117 ic plus van der Waals flavin mononucleotide (FMN) interdigitation and H-bonding interactions, respect
120 two adjacently bound flavin mononucleotide (FMN) ligands, one deeply buried and tightly bound and on
122 y a phosphate-bearing flavin mononucleotide (FMN) photocatalyst on high surface area metal-oxide film
123 de in the presence of flavin mononucleotide (FMN) resulted in the reversible formation of a stable fl
126 The IET from the flavin mononucleotide (FMN) to heme domains is essential in the delivery of ele
127 nal members of a rare flavin mononucleotide (FMN) variant class, and also variants of c-di-GMP-I and
129 acceptor of electrons flavin mononucleotide (FMN), and a chain of seven iron-sulfur clusters that car
130 inucleotide (FAD) and flavin mononucleotide (FMN), are two key cofactors involved in oxidative metabo
131 luding riboflavin and flavin mononucleotide (FMN), into the surrounding medium to act as extracellula
132 inucleotide (FAD) and flavin mononucleotide (FMN), the physiologically relevant catalyst dephosphoryl
133 binds the chromophore flavin mononucleotide (FMN), we have developed a promising photosensitizer that
134 n is a complex of the flavin mononucleotide (FMN)-binding domain and the heme domain, and thereby it
135 rization of UbiX as a flavin mononucleotide (FMN)-binding protein, no decarboxylase activity has been
136 rns out to be unusual flavin mononucleotide (FMN)-binding proteins that have probably arisen by gene
137 vidence indicated the flavin mononucleotide (FMN)-binding riboswitch aptamer adopted a 'bound-like' s
138 d the presence of one flavin mononucleotide (FMN)-binding site and two iron-sulfur cluster sites, con
141 of wild-type (WT) mouse facial motoneurons (FMNs) surviving with FMNs undergoing significant cell de
142 the mechanisms underlying the enhanced mSOD1 FMN loss after axotomy, we superimposed the facial nerve
144 ependent monooxygenase that requires an NADH:FMN oxidoreductase (EmoB) to provide FMNH2 as a cosubstr
153 ripheral site could bind either the observed FMN (the electron donor for the overall reaction) or the
154 na flavodoxin, where the naturally occurring FMN cofactor is substituted by different analogs, makes
155 opted a 'bound-like' structure in absence of FMN, suggesting only local conformational changes upon l
160 Overall, our results suggest that binding of FMN to MtrC is reversible and not highly specific, which
161 s, whereas Ser-390 anchors the side chain of FMN-interacting Gln-489 Our combined structural and muta
162 L was also found to catalyze cytidylation of FMN with CTP, making the modified FAD, flavin cytidine d
169 hydrogen bonds that the planar headgroup of FMN can form with this protein compared to FMN-binding p
174 fied complex I contained 0.94 +/- 0.1 mol of FMN, 29.0 +/- 0.37 mol of iron, and 1.99 +/- 0.07 mol of
177 t time that ascertaining the binding rate of FMN as a function of ionic strength can be used as a too
178 mbrane binding of Spir to the recruitment of FMN, a pivotal step for initiating actin nucleation at v
180 vironment, we decrease the susceptibility of FMN to undesired photoinitiated electron-transfer reacti
181 nteractions with the isoalloxazine system of FMN that are usually provided by protein side chains.
183 s cluster with genes for Na(+)-NQR and other FMN-binding flavoproteins in bacterial genomes and encod
186 structure in a human iNOS bidomain oxygenase/FMN construct have been observed by using low-temperatur
188 the dipole interactions between paramagnetic FMN and heme iron centers in the [Fe(III)][FMNH(*)] (FMN
189 sequence a previously identified plastidial FMN hydrolase AtcpFHy1 (At1g79790), belonging to the hal
190 utilizes the recently discovered prenylated FMN (prFMN) cofactor, and requires oxidative maturation
195 d in other studies) suggest that the reduced FMN coenzyme of IDI-2 functions as an acid/base catalyst
196 ward the compact form protecting the reduced FMN cofactor from engaging in unspecific electron transf
197 redox states; (iv) reactivity of the reduced FMN domain toward cytochrome c; (v) response to calmodul
198 N, NADH, and flavin reductase, which reduces FMN to FMNH2 using NADH as the electron donor, mitoNEET
199 genic CYP17A1, the cytochrome P450 reductase FMN domain delivers both electrons, and b5 is an alloste
200 ring flavin derivatives, such as riboflavin, FMN, and FAD, as well as lumichrome, a photodegradation
202 762N) of a conserved residue on the enzyme's FMN subdomain caused the NO synthesis activity to double
204 e reduced flavin in IDI-2 catalysis, several FMN analogues with altered electronic properties were ch
206 reased susceptibility of presymptomatic SOD1 FMNs to axotomy-induced cell death and, by extrapolation
209 hich it exists in two distinct bound states (FMN-shielded) and one common unbound state (FMN-deshield
211 lyzes the RFK activity, while the N-terminal FMN-adenylyltransferase (FMNAT) exhibits the FMNAT activ
218 ive hinge allows a best compromise among the FMN domain interactions and associated electron transfer
221 hows that the substitution of Arg-229 at the FMN binding site has led to a loss of hydrogen-bond and/
223 at hydrogen bonding interactions between the FMN N1, O2, and ribityl hydroxyls and the surrounding pr
226 ases (NOSs), two flexible hinges connect the FMN domain to the rest of the enzyme and may guide its i
227 ational results reveal that constraining the FMN fluorophore yields improved photochemical properties
228 t here that the protein RibR counteracts the FMN-induced "turn-off" activities of both FMN riboswitch
229 OV, the methyl group of Thr-394 "crowds" the FMN isoalloxazine ring, Leu-470 triggers side chain "fli
230 through the FMN subdomain and diminished the FMN-to-heme electron transfer by 90%, whereas mutations
232 avin cofactor, but dithionite eliminated the FMN peaks, indicating successful electron transfer to MM
233 t that separates it from FAD and exposes the FMN, allowing it to interact with its redox partners.
235 isotope effect specifically arising from the FMN suggests that vibrations local to the active site pl
238 pivoting on the C terminus of the hinge, the FMN domain of the enzyme undergoes a structural rearrang
240 d that the conserved surface residues in the FMN domain (E546 and E603) play key roles in facilitatin
241 this study, we identify glutamate 658 in the FMN domain of human iNOS to be a critical residue for iN
242 permitted identification of residues in the FMN domain whose environment differs in the two situatio
244 s to gain access to electrons located in the FMN-domain are favored in the absence of bound coenzyme.
245 ansfer into FAD and then distribute into the FMN domain for further transfer to internal or external
248 ane structure, topology, and dynamics of the FMN binding domain of CYPOR in a native membrane-like en
249 proximity to the solvent-exposed edge of the FMN cofactor along with other residues distributed aroun
252 ow the spatial and temporal behaviors of the FMN domain impact catalysis by the NOS flavoprotein doma
254 ngement and the CaM-dependent release of the FMN domain that coordinates to drive electron transfer a
258 h the NAD pool, presumably the flavin of the FMN moiety (site I(F)) and the other dependent not only
259 cantly influence the redox properties of the FMN or the accumulation of the anionic semiquinone.
260 spin P450, and the elevated potential of the FMN semiquinone/hydroquinone couple (-172 mV) is also an
261 (iii) CaM destabilizes interaction of the FMN subdomain with the NADPH-FAD subdomain but does not
262 quilibrium model for the conformation of the FMN subdomain, in which it exists in two distinct bound
263 xidized and hydroquinone redox states of the FMN, none of the replacements studied significantly alte
264 roduction is an IET-competent complex of the FMN-binding domain and heme domain, and thereby it facil
265 nvoked a role for large scale motions of the FMN-binding domain in shuttling electrons from the FAD-b
271 of mammalian cytochrome P450 reductase, the FMN semiquinone state is not thermodynamically stable an
272 s Tyr-401 and Phe-485 in phiLOV sandwich the FMN isoalloxazine ring from both sides, whereas Ser-390
273 We studied how each partner subdomain, the FMN redox state, and CaM binding may regulate the confor
275 aM from increasing electron flux through the FMN subdomain and diminished the FMN-to-heme electron tr
276 omposed of multiple domains, among which the FMN binding domain (FBD) is the direct electron donor to
277 stence of a second conformation in which the FMN domain is involved in a different interdomain interf
278 ion and a cross-monomer arrangement with the FMN domain rotated away from the NADPH-FAD center, towar
279 n and provides several interactions with the FMN isoalloxazine ring, was targeted in this study.
281 ough complementary charged residues with the FMN-binding site region of Ndor1 to perform electron tra
282 son of the FMN-bound wild type form with the FMN-free form reveals a significant conformational diffe
283 ion kinetics and had less shielding of their FMN subdomains compared with wild type and no longer inc
285 e sufficient ("high levels"), FMN binding to FMN riboswitches leads to a reduction of rib gene expres
287 an electron moves from the 2Fe-2S center to FMN(C), while the translocation of sodium across the mem
290 and regulates electron transfer from FAD to FMN and from FMN to heme by adjusting the relative orien
291 lar extracts of S. oneidensis convert FAD to FMN, whereas extracts of ushA mutants do not, and fracti
293 hydride transfer from both NADPH and NADH to FMN in the reductive half-reaction of pentaerythritol te
294 everal aspects of catalysis are sensitive to FMN-FAD/NADPH hinge length and that the native hinge all
295 ed here: suppression of electron transfer to FMN and control of the conformational equilibrium of the
298 ependent flavin reductase family and can use FMN or FAD as a prosthetic group to catalyze reductive d
299 use facial motoneurons (FMNs) surviving with FMNs undergoing significant cell death after axotomy.
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