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   1                                              FRET analysis in vitro is consistent with formation of a
     2                                              FRET and BRET approaches are well established for detect
     3                                              FRET is an indispensable experimental tool for studying 
     4                                              FRET theory dramatically underestimated the observed ene
     5                                              FRET was most pronounced for 21 nm-sized UCNPs, yielding
     6                                              FRET-based kinetic measurements were also consistent wit
     7                                              FRET-based stopped-flow measurements revealed that Atg18
     8                                              FRET-estimated radii of gyration and hydrodynamic radii 
     9 or single-molecule FRET spectroscopy with 2D FRET efficiency-lifetime analysis to probe the oligomeri
  
  
  
    13 e fluorescence emission intensity of CQDs, a FRET-based sensing platform for OPs determination was es
  
  
    16 in vascular smooth muscle cells expressing a FRET-biosensor comprising the cGMP-binding sites of PKGI
  
    18 ic interactions were monitored by means of a FRET-based sensor of conformation at the allosteric site
    19 ecific allosteric inhibitor of Akt through a FRET-based high-throughput screening, and characterizati
  
  
  
    23 restriction enzyme Ecl18kI, interacts with a FRET pair-labeled DNA fragment to form two different DNA
  
  
  
    27 e shown previously for our cytosine analogue FRET-pair, FRET between qAN1 and qAnitro positioned at d
    28 lights the synergy in molecular dynamics and FRET-based approaches to dissect the structural basis of
    29 g simultaneous measurements of extension and FRET during opening and closing of a DNA hairpin under t
    30 cal inhibition, genetic loss of function and FRET studies, we show that ENb-TRAIL blocks EGFR signall
    31 have applied super-resolution microscopy and FRET to determine the nanoscale spatial organization of 
    32 uorescence recovery after photobleaching and FRET corroborate the formation of multienzyme metabolic 
    33 ltiscale MD simulation-based predictions and FRET sensor-based experiments, we investigated the confo
  
  
  
    37 d in an experiment (i.e. the "total apparent FRET efficiency") on the interoligomeric FRET due to ran
  
    39 ts tagged with fluorescent proteins that are FRET pairs exhibit robust energy transfer at the plasma 
    40 our base analogues can now measure base-base FRET between 3 of the 10 possible base combinations and,
  
  
    43 antum dots-Gold nanoparticle (QDs-GNP) based FRET probes involving turn on/off principles have gained
  
    45 m-triggered release, reported by a Syx-based FRET probe, is abolished upon charge neutralization of 5
  
  
  
  
  
    51 nce intensity of the organic dyes excited by FRET was comparable to that of the upconversion emission
  
  
  
  
  
  
  
    59 hnical approach, single-molecule patch-clamp FRET anisotropy imaging and demonstrate by probing the d
  
    61 uorescence lifetime and two- and three-color FRET efficiencies with corrections for submillisecond ac
  
  
  
    65  that the donor and acceptor of our cytosine FRET-pair, tC(O) and tCnitro, can be conveniently combin
  
    67 g fluorescent RNA base analogue for detailed FRET-based structural measurements, as a bright internal
    68 imaging (Q-MSI), a technique that determines FRET efficiency and subcellular donor and acceptor conce
  
  
    71 eraction geometry is such that the efficient FRET is expected for one of these conformations-"antipar
    72  mechanism of chain looping remains elusive, FRET experiments in formamide and dimethyl sulfoxide sug
    73 g sites were biochemically validated by EMSA-FRET analysis and validated in vivo by ChIP-seq data fro
    74 1a dihydropyridine receptor subunit enhanced FRET to the II-III loop, thus indicating that beta1a bin
  
  
    77 sured by fluorescence lifetime imaging (FLIM-FRET) and identified interaction between aquaporin-1 and
  
  
    80 nt (IQF) peptide substrates originating from FRET (Forster Resonance Energy Transfer) are powerful to
    81 er jejuni CmeB pump combined with functional FRET assays to propose a transport mechanism where each 
  
    83 and kinetics of PLC-beta3 binding to Galphaq FRET and fluorescence correlation spectroscopy, two phys
  
  
    86 ells, and CFP-MDA5:YFP-LGP2 cells had higher FRET efficiencies in the presence of poly(I:C), indicati
    87 uorescence correlation spectroscopy and homo-FRET analysis was used to characterize assembly mutants 
  
    89 ns and chickens from LBM showed that pan-IAV FRET-PCR had a higher detection limit than virus isolati
    90 on, and by observing simultaneous changes in FRET and torque during a transition between right-handed
    91 discover unanticipated continuous changes in FRET with applied torque, and also show how FluoRBT can 
    92 s increase in vesicle number and decrease in FRET intensity, indicative of a Src-mediated conformatio
  
  
    95 litates significantly enhanced resolution in FRET structure determinations, demonstrated here in a st
    96 terial lipopolysaccharide leads to increased FRET of fluorescently labeled syntaxin 4 with VAMP3 spec
    97 mulation of beta2-AR and alpha2-AR increases FRET signal comparable to co-expressed FRET/BRET sensors
  
  
   100 ent FRET efficiency") on the interoligomeric FRET due to random proximity within the bilayer and the 
  
  
  
  
  
  
   107 erin observed using ratio-metric or lifetime FRET measurements reflect acto-myosin contractility with
   108 ich promoted a shift of bound CaM to a lower FRET orientation (without altering the amount of CaM bou
   109 hondria in CFP-LGP2:YFP-LGP2 cells had lower FRET signal in the presence of poly(I:C), suggesting tha
  
   111 rgy transfer and Monte Carlo simulations (MC-FRET) identifies directly 10 nm large nanodomains in liq
  
   113 proaches, our method correlates the measured FRET efficiencies to relative concentration of interacti
  
   115 ical performance was determined by measuring FRET efficiency and photostability of tandem fusion prot
   116 er-fluorescence lifetime imaging microscopy (FRET-FLIM)-based technique allowing visualization of rea
  
  
  
  
   121     Here, we use three-color single molecule FRET to show how combinations of ribosomal proteins uS4,
  
  
   124   We here report microsecond single-molecule FRET (smFRET) measurements on Cy3/Cy5-labeled primer-tem
  
  
   127 of X-ray crystallography and single-molecule FRET analysis to reveal the interactions of distinct cla
   128 , we developed a three-color single-molecule FRET assay to study the interaction of Hsp90 with a fluo
  
   130 ranslocation mechanism using single-molecule FRET has led to the hypothesis that substrate movements 
   131 d evanescent scattering, and single-molecule FRET imaging, providing real-time multiparameter measure
  
   133 tent with these predictions, single-molecule FRET measurements of folding of model RNAs revealed cons
  
   135 ombines two- and three-color single-molecule FRET spectroscopy with 2D FRET efficiency-lifetime analy
   136  we conducted confocal-based single-molecule FRET studies to investigate this phenomenon in greater d
  
   138  the authors use three-color single-molecule FRET to show how the dynamics of the rRNA dictate the or
  
  
   141 l new pairs were applied in a multimolecular FRET based sensor for detecting activation of a heterotr
  
   143 t and accurate detection, the nanostructured FRET sensors were assembled onto a patterned ZnO nanorod
   144 ental data, such as several NMR observables, FRET, SAXS and cryo-electron microscopy data, and enable
  
   146 t in two dimensions, a substantial amount of FRET is generated by energy transfer between fluorophore
  
   148  immune cells and prove the applicability of FRET-FLIM for visualizing SNARE complexes in live cells 
  
   150 cent moieties, we generated a novel class of FRET-based reporter to monitor conformational difference
   151 es can also be modulated by a combination of FRET and charge transfer (CT), and characterize the conc
  
  
  
  
  
   157      Our results suggest that the effects of FRET and photoredox quenching should be taken into consi
   158 ign, synthesis, and biological evaluation of FRET Iron Probe 1 (FIP-1), a reactivity-based probe that
  
  
  
  
  
  
   165 fferent ratios, tuning the relative rates of FRET and CT, which were competitive quenching pathways. 
  
  
  
   169 can be analysed by techniques such as NMR or FRET, provided that the information relative to the indi
  
  
  
   173 viously for our cytosine analogue FRET-pair, FRET between qAN1 and qAnitro positioned at different ba
   174 photoluminescence intensity of the patterned FRET sensor increases linearly with increasing concentra
  
  
   177 pt the CRAC domains of both proteins prevent FRET between SIDT1 and SIDT2 and the cholesterol analogu
  
   179 odels without consideration of the proximity FRET leads to incorrect conclusions about the oligomeric
  
   181 e of membrane proteins in a static quenching FRET experiment: the model of Veatch and Stryer, derived
   182  find that bulk, two-color, static quenching FRET experiments are best suited for the study of monome
  
   184 1-phosphate (i.e., transient alpha1B-AR-Rab5 FRET signal followed by a sustained alpha1B-AR-Rab9 inte
   185 wed the highest dynamic range in ratiometric FRET imaging experiments with the G-protein sensor.     
   186 w how FluoRBT can facilitate high-resolution FRET measurements of molecular states, by using a mechan
  
  
  
   190   The detection limit of one-step pan-IAV RT FRET-PCR was 10 copies of the matrix gene per reaction, 
  
   192  of beta2 subunits; and both yielded similar FRET profiles when probed for subunit adjacency, suggest
  
   194 ewer approaches using subcellularly targeted FRET reporter sensors have helped define more compartmen
  
  
  
   198  formalism to describe the dependence of the FRET efficiency measured in an experiment (i.e. the "tot
   199 leavage by NE results in dissociation of the FRET fluorescent protein pair and alteration of the fluo
   200 tribute to the detailed understanding of the FRET-based biosensor and guide the rational design of ne
   201      At larger surface-to-volume ratios, the FRET efficiency decreased by an increasing competition o
   202 with two different activation reporters, the FRET-based calcium biosensor Twitch1 and fluorescent NFA
  
   204 se, the quenched emission of QDs through the FRET mechanism is restored by displacing the dextran fro
  
  
  
  
  
   210  fluorescent dye that quenched QD PL through FRET or a ruthenium(II) phenanthroline complex that quen
   211 d genetic approaches combined with real-time FRET imaging and high resolution microscopy, we demonstr
   212  in conformation, making it complementary to FRET based techniques, which are insensitive at very sho
   213 ved (TR) small-angle X-ray scattering and TR-FRET to correlate changes in the DNA conformations with 
   214 e now report that the same conformational TR-FRET based immunoassay detects polyglutamine- and temper
   215 d fluorescence resonance energy transfer (TR-FRET) and double electron-electron resonance (DEER), com
   216 d fluorescence resonance energy transfer (TR-FRET) assay was 9.6 ng/mL, and the limit of detection (L
   217 d Fluorescence Resonance Energy Transfer (TR-FRET) assay, we demonstrate that Munc13-4 binds to Rab11
   218 d fluorescence resonance energy transfer (TR-FRET) technology, to identify reversible inhibitors.    
   219 d in-cell Forster resonance energy transfer (FRET) and glutathione S-transferase pulldown analyses id
   220 cribed to Forster resonance energy transfer (FRET) and, to a lesser extent, nanosurface energy transf
   221 ntitative Forster resonance energy transfer (FRET) approach to show that Ecadherin forms constitutive
  
   223 d on fluorescence resonance energy transfer (FRET) are powerful tools for quantifying and visualizing
   224  time-resolved fluorescence energy transfer (FRET) assay reporting membrane expression and real-time 
  
   226  and fluorescence resonance energy transfer (FRET) assays, we now show the PBM directs interaction of
  
   228 t of fluorescence resonance energy transfer (FRET) between phycoerythrin-biotin (PhycoE-Biotin) and C
   229 (or fluorescence) resonance energy transfer (FRET) between the C-dots and EtBr was studied, in which 
   230 ng a fluorescence resonance energy transfer (FRET) biosensor, we show that a phosphomimetic mutation 
   231 rmance of Forster Resonance Energy Transfer (FRET) biosensors depends on brightness and photostabilit
  
   233 d on Fluorescence Resonance Energy Transfer (FRET) for the MPR by employing computational simulation 
   234 on a fluorescence resonance energy transfer (FRET) from the QDs to the GO sheets, quenching the fluor
   235 -molecule Forster resonance energy transfer (FRET) is a powerful tool to study interactions and confo
  
   237 , we used Forster resonance energy transfer (FRET) measured by fluorescence lifetime imaging (FLIM-FR
   238 cule fluorescence resonance energy transfer (FRET) methods to investigate a set of twister RNAs with 
   239 ethod and Forster resonance energy transfer (FRET) microscopy imaging to visualize nanoparticle self-
  
  
   242 t a simple Forster resonant energy transfer (FRET) network model accurately predicts the observed pho
   243 as either Forster resonance energy transfer (FRET) or charge/electron transfer donor and/or acceptor.
   244 equential Forster resonance energy transfer (FRET) pathways between QDs and fluorescent dyes, lumines
   245 ions, two Forster resonance energy transfer (FRET) populations were observed that corresponded to a f
   246 ular fluorescence resonance energy transfer (FRET) probe, which previously allowed us to resolve a de
   247 cence and Forster resonance energy transfer (FRET) processes by fixing the fluorophores in a rotaxane
  
   249 d using a Forster Resonance Energy Transfer (FRET) relationship between the photochrome and a co-enca
   250 g of fluorescence resonance energy transfer (FRET) signals between CDs and AuNPs as nanoquenchers, th
  
   252 -molecule Forster resonance energy transfer (FRET) to measure the global reconfiguration dynamics of 
   253 with fluorescence resonance energy transfer (FRET) to resolve single-molecule association dynamics at
  
  
   256 ns, using Forster resonance energy transfer (FRET), confocal microscopy, and intracellular calcium qu
   257 nation of Forster resonance energy transfer (FRET), nonreducing SDS-PAGE, and strategic mutation of t
   258 vivo fluorescence resonance energy transfer (FRET), small-angle x-ray scattering (SAXS), x-ray crysta
   259 sing fluorescence resonance energy transfer (FRET), we demonstrate increased interaction of the hVDR-
   260 d on fluorescence resonance energy transfer (FRET), which can detect the real-time PDGFR activity in 
   261 cule fluorescence resonance energy transfer (FRET), which enabled us to resolve heterogeneous populat
   262 th a fluorescence resonance energy transfer (FRET)-based alpha-catenin conformation sensor demonstrat
  
   264 oyed fluorescence resonance energy transfer (FRET)-based biosensors in conjunction with collagen-coup
   265 eted fluorescence resonance energy transfer (FRET)-based biosensors toward subcellular FAs to report 
   266  targeted Forster resonance energy transfer (FRET)-based calcium indicator (4mtD3cpv, MitoCam) was ex
   267 ressing a Forster resonance energy transfer (FRET)-based cAMP biosensor, we confirmed that atropine i
   268  a set of Forster resonance energy transfer (FRET)-based crowding-sensitive probes and investigate th
  
   270 nt a fluorescence resonance energy transfer (FRET)-based sensor, CUTie, which detects compartmentaliz
   271 hile fluorescence resonance energy transfer (FRET)-based sensors for these kinases had previously bee
  
   273   Tunable Forster resonance energy transfer (FRET)-quenched substrates are useful for monitoring the 
  
  
  
  
   278 ed on fluorescence resonance energy transfer(FRET) between carbon dots(CDs) and AuNPs as nanoquencher
  
   280 e variants on TRIO function, we utilized two FRET-based biosensors: a Rac1 biosensor to study mutatio
  
  
  
  
  
  
  
   288 PLSM system is evaluated and optimized using FRET standards expressed in living cells, which enables 
   289 o demonstrate the versatility of sFISH using FRET detection and mRNA isoform profiling as examples.  
  
  
  
   293 s technique exploits the principle that when FRET occurs, energy from a donor fluorophore is transfer
   294 Escherichia coli are more complicated, where FRET-increases and scaling behavior are observed solely 
  
  
  
  
   299 measurements of global DNA deformations with FRET measurements of local conformational changes, FluoR
   300 Fluorescein and TAMRA dye mixtures as a zero FRET control, and Cerulean-Venus FRET standards as posit
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