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   1                                              LANA acts on the KSHV terminal repeat (TR) elements to m
     2                                              LANA also drives dysregulated cell growth through a mult
     3                                              LANA also induces chromosomal instability, thus promotin
     4                                              LANA also simultaneously binds to TR DNA and mitotic chr
     5                                              LANA binds cooperatively to the terminal repeat (TR) reg
     6                                              LANA binds to KSHV terminal repeat (TR) DNA and tethers 
     7                                              LANA bound with high occupancy to the KSHV genome termin
     8                                              LANA has also been suggested to affect host gene express
     9                                              LANA interactions with high-mobility group AT-hook 1 (HM
    10                                              LANA is essential for tethering the Kaposi's sarcoma-ass
    11                                              LANA is known to activate ERK and limit the activity of 
    12                                              LANA is required for tethering of the KSHV episome to th
    13                                              LANA mediates KSHV DNA replication and segregates episom
    14                                              LANA recruited PCNA to the KSHV genome via Bub1 to initi
    15                                              LANA recruitment sites on the KSHV genome inversely corr
    16                                              LANA self-associates to bind KSHV terminal-repeat (TR) D
    17                                              LANA-1 and ANG interaction occurred in the absence of th
    18                                              LANA-1 and ANG interaction with one of the proteins, ann
    19                                              LANA-1, ANG, and p53 colocalized in KSHV-infected cells,
    20                                              LANA-associated TIP60 retained acetyltransferase activit
    21 h KSHV latency-associated nuclear antigen 1 (LANA-1) and the host transcriptional repressor KAP1, whi
    22 g only latency-associated nuclear antigen 1 (LANA-1) protein, and in KSHV latently infected primary e
  
  
  
  
    27 TR) region of the viral episome via adjacent LANA binding sites (LBS), but the molecular mechanism by
    28 ions is a regulated phenomenon, which allows LANA to interact with cellular components in different c
    29 Our data further support a role for Bub1 and LANA in PCNA-mediated cellular DNA replication processes
    30 Mdm2 in high-molecular-weight fractions, and LANA-1, p53, and Mdm2 also coimmunoprecipitated with ANG
    31 he classic histological features of MCD, and LANA-1 immunostaining identified HHV-8-infected plasmabl
  
    33 nteractions between ANG-LANA-1, ANG-p53, and LANA-1-p53, the induction of p53, p21, and Bax proteins,
    34 al cells through the expression of vFLIP and LANA, two KSHV-latent genes that activate the NF-kappaB 
    35 latent proteins, including vIRF3, vFLIP, and LANA, target the expression, function, and stability of 
    36 taining analyses, we observed annexin A2-ANG-LANA-1, annexin A2-ANG, and ANG-LANA-1 colocalizations. 
  
    38 G levels, decreased interactions between ANG-LANA-1, ANG-p53, and LANA-1-p53, the induction of p53, p
    39  for HHV-8 anti-latent nuclear antigen (anti-LANA) and antilytic antibodies by immunofluorescence ass
    40 TIVE-LTC proteins immunoprecipitated by anti-LANA-1 and ANG antibodies identified 28 common cellular 
  
    42 -encoded latency-associated nuclear antigen (LANA) disrupts the association of CIITA with the MHC-II 
    43  of KSHV latency-associated nuclear antigen (LANA) dots, as detected by immunofluorescence microscopy
  
  
  
    47 inducing latency-associated nuclear antigen (LANA) expression during early stages of infection by tar
    48 ing KSHV latency-associated nuclear antigen (LANA) in primary effusion lymphoma (PEL) cell lines and 
    49 s (KSHV) latency-associated nuclear antigen (LANA) is a 1,162-amino-acid protein that mediates the ma
  
  
  
  
    54 s (KSHV) latency-associated nuclear antigen (LANA) is a multifunctional protein with roles in gene re
  
  
  
    58     KSHV latency-associated nuclear antigen (LANA) mediates persistence of viral episomes in latently
  
  
  
    62 rescence labeling of latent nuclear antigen (LANA) protein, together with fluorescence in situ RNA hy
    63 -encoded latency-associated nuclear antigen (LANA) to repress expression of the major lytic replicati
    64     KSHV latency-associated nuclear antigen (LANA) transcription levels rose consistently over the sa
    65 pesvirus latency-associated nuclear antigen (LANA)(1-23), human papillomavirus 8 E2, and prototype fo
  
    67 osome by latency associated nuclear antigen (LANA), which binds in the terminal repeat (TR) region of
  
  
  
  
  
  
    74 tion and latency-associated nuclear antigen (LANA-1) upregulate the multifunctional protein angiogeni
    75 ssion of latency-associated nuclear antigen (LANA-1) upregulates the angiogenic multifunctional 123-a
    76 abundant latency-associated nuclear antigen, LANA, on the host genome and its impact on host gene exp
    77 x vivo responses to the KSHV latent antigens LANA, vFLIP, vCyclin, and Kaposin, with LANA most freque
    78  proteins with intrinsic properties, such as LANA, that minimize epitope recognition by CD8(+)T cells
  
  
  
  
  
  
    85 n effect that is exploited during latency by LANA-1-mediated recruitment of the host transcriptional 
  
  
  
    89 erstand the conserved functions performed by LANA homologs, we generated a recombinant MHV68 virus th
  
  
  
  
    94 ized by high-level expression of cytoplasmic LANA and nuclear ORF59, a marker of lytic replication.  
    95     We confirmed the presence of cytoplasmic LANA in a subset of cells in lytically active multicentr
  
    97 metry analysis demonstrated that cytoplasmic LANA isoforms were full length, containing the N-termina
    98 arities in their DNA-binding domains (DBDs), LANA homologs from Kaposi sarcoma-associated herpesvirus
    99  nuclear translocation resulted in decreased LANA-1 gene expression and reduced KSHV-infected endothe
  
  
  
  
   104 the major viral latency transcripts encoding LANA as well as the viral miRNAs and thus has the potent
  
  
  
   108 HeLa cell nuclear extracts stably expressing LANA and was verified by coimmunoprecipitation analyses 
   109 h an interaction with LANA which facilitates LANA sequestration away from KSHV episomes during reacti
  
   111 in which purified, adenovirus-expressed Flag-LANA protein was incubated with an array displaying 4,19
  
   113 rf2 association, while Nrf2 is essential for LANA-1 and KAP1 recruitment to the ORF50 promoter and it
  
   115 cted B cells with CD4(+)T cells specific for LANA, a protein expressed in all KSHV-infected cells and
  
   117  substitutions in Kaposi sarcoma herpesvirus LANA and prototype foamy virus chromatin-binding sequenc
  
  
  
  
  
   123 throughput sequencing (ChIP-Seq) to identify LANA binding sites in the viral and host-cell genomes of
  
  
  
  
  
  
  
  
   132 the electrostatic patch exerts a key role in LANA-mediated DNA replication and episome persistence an
   133 nternal LANA regions exert critical roles in LANA-mediated DNA replication, segregation, and episome 
  
   135 esses multiple viral latent genes, including LANA, vFLIP, vCYC, all viral micro RNAs, and kaposin und
   136 ented histone binding in vitro and increased LANA occupancy at identified LANA target promoters in vi
  
  
  
  
  
  
   143 ecently showed that deletion of all internal LANA sequences results in highly deficient episome maint
  
  
  
  
   148 ture, we found that apart from the two known LANA binding sites, LBS1 and LBS2, LANA also binds to a 
  
  
   151 dentifies a novel mechanism utilized by KSHV LANA to deregulate MHC-II gene expression, which is crit
   152 its nuclear translocation downregulates KSHV LANA-1 expression and ANG is necessary for KSHV latency,
   153 e generated an MHV68 virus that encodes KSHV LANA (kLANA) in place of MHV68 LANA (mLANA) and evaluate
  
   155 esulted in no significant difference in KSHV LANA subcellular localization, we found that the methyla
  
  
  
   159  we report the crystal structure of the KSHV LANA DNA-binding domain (DBD) in complex with its high-a
  
  
   162 in sequence, structure, and function to KSHV LANA (kLANA), thereby allowing the study of LANA-mediate
  
   164 posi's sarcoma-associated herpesvirus (KSHV) LANA protein functions in latently infected cells as an 
   165 posi's sarcoma-associated herpesvirus (KSHV) LANA protein is essential for the replication and mainte
  
  
  
  
   170 ernative mechanism for telomere maintenance, LANA expression had minimal effect on telomere length.  
  
   172  encodes KSHV LANA (kLANA) in place of MHV68 LANA (mLANA) and evaluated the virus's capacity to repli
  
  
  
  
   177 ressed viral proteins found in PELs, namely, LANA and viral IRF3 (vIRF3), albeit at lower levels, wit
  
   179 , these results suggest that activated Nrf2, LANA-1, and KAP1 assemble on the ORF50 promoter in a tem
   180  from that of ET domain recognition of NSD3, LANA of herpesvirus, and integrase of MLV, which involve
   181  translocation resulted in decreased nuclear LANA-1 and ANG levels, decreased interactions between AN
  
   183 l sequence exerted effects on the ability of LANA to retain green fluorescent protein (GFP) expressio
  
  
  
   187 s therefore suggests that the association of LANA to chromatin during a productive infection cycle is
   188 ur binding assays revealed an association of LANA with NAP1L1 in KSHV-infected cells, which binds thr
   189     Thus, H2AX contributes to association of LANA with the TRs, and phosphorylation of H2AX is likely
   190 ructure, oligomerization, and DNA binding of LANA have evolved differently to assemble on the TR DNA.
  
   192 enome regulation via a complex consisting of LANA and the H3K9me1/2 histone demethylase JMJD1A/KDM3A.
   193 ent sites of the complex, while depletion of LANA expression or overexpression of a KDM3A binding-def
  
  
  
   197     We hypothesize that cytoplasmic forms of LANA, whose expression increases during lytic replicatio
   198 ytic replication and extends the function of LANA from its role during latency to the lytic replicati
   199 onarily conserved and divergent functions of LANA homologs in Rhadinovirus infection and disease.    
  
   201 development of pharmacological inhibitors of LANA E3 ubiquitin ligase activity may allow strategies t
   202 ed to the conclusion that the interaction of LANA with RFX proteins interferes with the recruitment o
   203 ovel function of the cytoplasmic isoforms of LANA during lytic replication and extends the function o
   204 evealed the presence of multiple isoforms of LANA in the cytoplasm of ORF50/RTA-activated Vero cells 
   205 terminally truncated cytoplasmic isoforms of LANA, resulting from internal translation initiation, ha
  
  
   208 or regulation of the nuclear localization of LANA will enhance our understanding of the biology of th
  
   210  RFX proteins and that the overexpression of LANA disrupts the association of CIITA with the MHC-II p
   211 Further analysis revealed partial overlap of LANA and STAT1 binding sites in several gamma interferon
  
  
   214    The specific TopoIIbeta binding region of LANA has been identified to its N terminus and the first
  
  
  
  
   219 0 is important for modulation of a subset of LANA functions and properties of this residue, including
  
   221    These results suggest that trafficking of LANA to different subcellular locations is a regulated p
  
   223 or the controlled nucleation of higher-order LANA oligomers that might contribute to the characterist
  
  
   226 AP1 and the viral latency-associated protein LANA-1 to mediate global lytic gene repression and thus 
   227 k represents a report of KSHV latent protein LANA and its interactions with AK-B leading to induction
  
  
  
   231  assayed for binding to purified recombinant LANA protein in vitro but bound with low affinity compar
   232 y-four base pairs are sufficient to regulate LANA transcription in response to the viral RTA protein 
  
   234 ion assays from NAP1L1-depleted cells showed LANA-mediated recruitment of NAP1L1 at the terminal repe
  
   236 ttach to mitotic chromosomes, and C-terminal LANA binds TR DNA and also associates with mitotic chrom
   237 o generate a tethering mechanism, N-terminal LANA binds histones H2A/H2B to attach to mitotic chromos
  
  
  
   241 ammaherpesvirus 68 (MHV68) demonstrated that LANA is important for acute replication, latency establi
   242 ide signal amplification, we determined that LANA localizes to the cytoplasm in different cell types 
   243 lass II-matched CD4(+)T cells and found that LANA-specific T cells restricted to different epitopes r
  
  
   246   Combined, ChIP-seq and RNA-seq reveal that LANA accumulates at active gene promoters that harbor sp
   247 nd Gene Ontogeny (GO) analysis revealed that LANA binds to genes within the p53 and tumor necrosis fa
  
  
  
  
  
   253 roughput sequencing (ChIP-seq) and show that LANA predominantly targets human genes near their transc
  
   255 matin immunoprecipitation assays showed that LANA binds to the MHC-II promoter along with RFX protein
  
  
  
  
   260     Taken together, our results suggest that LANA may play a role in regulation of epigenetic marks o
  
   262 the latently infected cells, suggesting that LANA possesses a novel role in regulating KSHV replicati
  
  
  
   266 roteomics analysis using KSHV TR DNA and the LANA binding site as the affinity column identified topo
  
  
  
  
  
  
   273  cells revealed a moderate activation of the LANA promoter region by hypoxia as well as by cotransfec
   274 nalysis of a 1.2-kb sequence upstream of the LANA translational start site identified six potential h
  
  
   277 dy also identified a novel intron within the LANA 5' untranslated region using a splice acceptor at 1
   278 a deletion of the RBP-Jkappa site within the LANA promoter to evaluate the function of the RBP-Jkappa
  
  
   281    However, the precise mechanism underlying LANA-mediated chromosomal instability remains uncharted.
  
  
  
  
  
   287 sults identifying a novel mechanism by which LANA, a latency-associated antigen encoded by KSHV, can 
  
   289  provide a potential mechanism through which LANA may regulate several host cell pathways by direct b
  
  
   292 yses of BC-3 cell lysates, ANG coeluted with LANA-1, p53, and Mdm2 in high-molecular-weight fractions
  
  
  
   296 ggested that annexin A2 forms a complex with LANA-1 and ANG as well as a separate complex with ANG.  
   297 we show that TopoIIbeta forms complexes with LANA that colocalize as punctuate bodies in the nucleus 
   298 e disassociation through an interaction with LANA which facilitates LANA sequestration away from KSHV
  
  
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