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1 LNA (locked nucleic acids, i.e. oligonucleotides with a
2 LNA finds small highly conserved network regions and pro
3 LNA modified ASOs can cause hepatotoxicity, and this ris
4 LNA was used in three positional patterns: near the 5' e
5 LNA-5' increased the average Phred Q30 score by 60% and
6 LNA-92a exerts cell-protective, proangiogenic, and anti-
7 LNA-92a significantly (P<0.01) reduced miR-92a expressio
8 LNA-anti-miR-192 significantly reduced levels of miR-192
9 LNA-antimiR-34 (8-mer) efficiently silenced all three mi
10 LNA-CTGs produced rapid and sustained improvement of mot
11 LNA-FISH requires 5 h, or between 10 and 36 h when combi
12 LNA-modified chemistries can effectively silence miR-15
13 LNA-modified TFOs form more stable triplexes than alpha-
14 LNAs targeting sequences at or near transcription start
19 st that the new antireverse cap analogue m(7(LNA))G[5']ppp[5']G 3 is a potential candidate for RNA-ba
20 leic acid (LNA)-modified cap analogue 3, m(7(LNA))G[5']ppp[5']G, has been synthesized and its biologi
21 ked nucleic acid-modified antisense miR-92a (LNA-92a) was applied either regionally (antegrade or ret
22 NAs) to the beacon structure, resulting in a LNA molecular beacon (LMB) with robust stability after s
23 ulation of MOR by let-7 was revealed using a LNA-let-7 inhibitor to knockdown let-7 in SH-SY5Y cells.
28 ted nucleotides such as locked nucleic acid (LNA) are very popular as affinity-, specificity-, and st
29 take full advantage of locked nucleic acid (LNA) based molecular beacons (LNA-MBs) for a variety of
30 tor capped hairpin with locked nucleic acid (LNA) bases on the dynamics and efficiency of hole transp
33 hococcus, Prochlorococcus, low nucleic acid (LNA) content bacterioplankton and small plastidic protis
34 fications (BNA) such as locked nucleic acid (LNA) designed to induce target RNA cleavage have been sh
35 vivo administration of locked nucleic acid (LNA) inhibitors that suppression of endogenous miR-29 lo
37 oxyethylribose (MOE) or locked nucleic acid (LNA) modifications were designed to investigate whether
38 A-BCA system contains a locked nucleic acid (LNA) modified DNA probe for improving hybridization effi
39 -1-yl)carbonyl-2'-amino locked nucleic acid (LNA) monomer X is a highly versatile building block for
41 ted nucleotides such as locked nucleic acid (LNA) monomers are used extensively in molecular biology
42 fied with six different locked nucleic acid (LNA) monomers, i.e. conventional and C5-alkynyl-function
43 -methoxyethyl (MOE) and locked nucleic acid (LNA) nucleosides yielded a series of nucleoside modifica
44 e use of functionalized locked nucleic acid (LNA) oligomers as biomolecular handles that permit seque
47 ates containing DNA and locked nucleic acid (LNA) oligonucleotides are active, and oligospermine conj
50 also demonstrated that locked nucleic acid (LNA) probes improved sensitivity approximately 4-fold co
51 the targeted loci, and locked nucleic acid (LNA) probes were used to enhance the detection of strain
59 h DNA, RNA and combined locked nucleic acid (LNA)-DNA backbones can all detect miRNAs of low (<1 nM)
60 iac tissues and whether locked nucleic acid (LNA)-modified anti-miR chemistries can target cardiac ex
61 of 8-mer seed-targeting locked nucleic acid (LNA)-modified anti-miR oligonucleotides, termed tiny LNA
62 ed seed-targeting 8-mer locked nucleic acid (LNA)-modified antimiR (LNA-antimiR-34) can provide thera
64 the present study, the locked nucleic acid (LNA)-modified cap analogue 3, m(7(LNA))G[5']ppp[5']G, ha
65 uated the efficacy of a locked nucleic acid (LNA)-modified inhibitor of miR-192, designated LNA-anti-
66 cted chimpanzees with a locked nucleic acid (LNA)-modified oligonucleotide (SPC3649) complementary to
69 L-6((-)/(-))) mice with locked nucleic acid (LNA)-modified phosphorothioate oligonucleotide complemen
70 delivery using a simple locked nucleic acid (LNA)-polymer conjugate that assembles into spherical mic
72 inds PS-ASOs containing locked-nucleic-acid (LNA) or constrained-ethyl-bicyclic-nucleic-acid ((S)-cEt
74 tide probes containing locked nucleic acids (LNA) and 1-ethyl-3-(3-dimethylaminopropyl) carbodiimide
75 rected mutagenesis and locked nucleic acids (LNA) complementary to defined domains of SL9266 and its
76 with modification with locked nucleic acids (LNA) increased conformational stability and nuclease res
79 dies, using anti-sense locked-nucleic acids (LNAs) and synthetic RNA mimetics, respectively, revealed
82 scribe a unique use of locked nucleic acids (LNAs) for studying nuclear long noncoding RNA, an RNA su
83 ucleotides (ASOs) with locked nucleic acids (LNAs) improve target affinity, RNase H activation and st
85 herapeutic delivery of locked nucleic acids (LNAs) targeting BCAR4 attenuated YAP-dependent glycolysi
86 herapeutic delivery of locked nucleic acids (LNAs) targeting BCAR4 strongly suppresses breast cancer
87 reatment of cells with locked nucleic acids (LNAs) targeting these miRNAs inhibits metastasis to mult
88 we introduced Invader locked nucleic acids (LNAs), i.e., double-stranded probes that are activated f
89 ence signal intensity between the beta-actin LNA probe and a biotinylated, nonspecific control LNA we
91 uences with DNA/LNA alternating bases or all LNA bases were able to resist nonspecific protein bindin
93 sed exclusively of locked nucleic acids (all-LNAs) complementary to CUG repeats, as potential therape
94 Our data strongly indicate that short all-LNAs complementary to CUG repeats are a promising therap
96 skeletal muscles of DM1 mouse model the all-LNAs induced the reduction of the number and size of CUG
97 onstrated that very short, 8- or 10-unit all-LNAs effectively bound the CUG repeat RNA and prevented
98 othesized that enhanced affinity might allow LNAs to recognize chromosomal DNA inside human cells and
99 general, and the N2'-functionalized 2'-amino-LNA derivatives in particular, showed improved duplex th
100 hydrocarbon (PAH) dyes attached to 2'-amino-LNA monomers are incorporated at four stations of the sy
102 tose-modified thymidine, LNA-T, and 2'-amino-LNA-T nucleosides were synthesized, converted into the c
103 ionalized thymine and 5-methylcytosine amino-LNA phosphoramidites from these key intermediates, respe
107 range of backbone structures (RNA, DNA, and LNA templates and RNA and DNA primers) and two types of
108 y to completion on short homopolymer RNA and LNA templates, which favor an A-type duplex geometry.
109 est this hypothesis, we synthesized antigene LNAs (agLNAs) complementary to sequences within the prom
110 locked nucleic acid (LNA)-modified antimiR (LNA-antimiR-34) can provide therapeutic benefit in mice
111 of the standard Linear Noise Approximation (LNA) to remain uniformly accurate for long times, still
113 ntaining high affinity modifications such as LNA, hepatotoxicity can occur as a result of unintended
114 otides containing locked nucleic acid bases (LNAs) have increased affinity for complementary DNA sequ
115 s new design adds locked nucleic acid bases (LNAs) to the beacon structure, resulting in a LNA molecu
116 nucleic acid (LNA) based molecular beacons (LNA-MBs) for a variety of applications including analysi
120 AE residues, the conformationally locked BNA/LNA ribose with a 2'-O,4'-C-methylene bridge, or the 2'-
121 hen loaded in a shear orientation, the bound LNA oligomers were measured to be two orders of magnitud
127 ity and biological activity with carbocyclic LNA (cLNA) analogs by replacing the 2'-oxygen atom in LN
129 ionally, in MMR-proficient Escherichia coli, LNA modification of the ssODNs enabled effective single-
130 scrimination ability of the surface-confined LNA probes could be controlled by ionic modulations.
131 ce thermal stability of the surface-confined LNA-DNA duplexes, the nature of concentration dependence
136 robe and a biotinylated, nonspecific control LNA were used to determine optimal conditions for this t
137 detected and differentiated from the control LNA with high confidence (< 14% overlap between curves).
138 duced the infarct size compared with control LNA-treated pigs, which correlated with an improved ejec
140 of microRNA-155 by a systemically delivered LNA-anti-miR attenuated cardiac infiltration by monocyte
141 A)-modified inhibitor of miR-192, designated LNA-anti-miR-192, in mouse models of diabetic nephropath
142 t allow for fair comparison of the different LNA and GNA outputs, as such measures do not exist.
143 with a 4 base-pair stem and alternating DNA/LNA bases is desirable for intracellular applications as
145 e systematically synthesized a series of DNA/LNA chimeric MBs and studied the effect of DNA/LNA ratio
146 A chimeric MBs and studied the effect of DNA/LNA ratio in MBs on their thermodynamics, hybridization
147 e significantly improved by lowering the DNA/LNA ratio in the probe, and most significantly, by havin
148 It was found that only MB sequences with DNA/LNA alternating bases or all LNA bases were able to resi
151 three positional patterns: near the 5' end (LNA-5'), near the 3' end (LNA-3') and distributed throug
152 Herein we introduce a novel fluorescent LNA/DNA machine, a nanocrawler, which reversibly moves a
155 Histopathological evaluation of tissues from LNA treated animals confirmed the hepatocellular involve
157 t, these properties render C5-functionalized LNA as a promising class of building blocks for RNA-targ
158 dified with four different C5-functionalized LNA cytidine and C8-functionalized LNA adenosine monomer
159 welve structurally diverse C5-functionalized LNA uridine (U) phosphoramidites were synthesized and in
161 modified with C5-fluorophore-functionalized LNA-U monomers enable fluorescent discrimination of targ
163 nal cohort of mice subjected to MI was given LNA-antimiR-34a (15-mer) to inhibit miR-34a alone as a c
164 tilabeled quencher-free MBs based on Glowing LNA monomers is demonstrated (a) using in vitro transcri
166 and fluorescence properties of these Glowing LNA probes are efficiently modulated and optimized by ch
168 ockdown in mice treated with non-hepatotoxic LNA ASOs, while the levels of many unintended transcript
171 acids) 0.07% of LNA; "Low LNA" (0.4%); "High LNA" (4.8%); and a "DHA + EPA" diet, containing 0.4% of
172 results differentiate the effects of a High LNA diet from one with added EPA and DHA even though the
173 ared to the DHA + EPA diet, whereas the High LNA diet induced a less pronounced, but significant redu
180 A constrained tricyclic analogue of alpha-L-LNA (2), which contains dual modes of conformational res
181 ubstitution converts 8 into 2'-amino-alpha-L-LNA adenine intermediate 9, which after a series of nont
183 with pyrene-functionalized 2'-amino-alpha-L-LNA adenine monomers X-Z display greatly increased affin
184 sequences containing this tricyclic alpha-L-LNA analogue (alpha-L-TriNA 2, 5) indicate that this mod
191 TFOs form more stable triplexes than alpha-L-LNA-modified counterparts owing to slower triplex dissoc
193 article, we extend this strategy to alpha-L-LNA: i.e., one of the most interesting diastereomers of
194 N2'-Pyrene-functionalized 2'-amino-alpha-L-LNAs (locked nucleic acids) display extraordinary affini
195 r N2'-pyrene-functionalized 2'-amino-alpha-L-LNAs of considerable interest for DNA-targeting applicat
199 (as % total fatty acids) 0.07% of LNA; "Low LNA" (0.4%); "High LNA" (4.8%); and a "DHA + EPA" diet,
200 bases, was readily accessible to tiled 8-mer LNA and 15-mer DNA probes, whereas an unmodified version
201 dulloblastoma cells) passively took up 8-mer LNA-anti-miRs and specifically inhibited targeted microR
202 ion of the miR-17~92 cluster family by 8-mer LNA-anti-miRs might be considered for the treatment of S
203 derscore the utility of seed-targeting 8-mer LNA-antimiRs in the development of new therapeutic appro
205 , and 9 healthy controls (HCs) using miRCURY LNA Universal RT microRNA polymerase chain reaction pane
206 ssion of miR-183-96-182 cluster with miRCURY LNA miR inhibitors decreases the proliferation and migra
208 delivery of a locked nucleic acid-modified (LNA-modified) antimiR oligonucleotide also failed to blo
211 the first time that it is possible to obtain LNA-like (Locked Nucleic Acid 1) binding affinity and bi
212 containing (as % total fatty acids) 0.07% of LNA; "Low LNA" (0.4%); "High LNA" (4.8%); and a "DHA + E
215 r efforts have been devoted to the design of LNA derivatives that induce even higher binding affinity
216 findings have implications on the design of LNA molecular probes for intracellular monitoring applic
217 New guidelines are suggested for design of LNA probes, which significantly improve mismatch discrim
219 is effort we have investigated the effect of LNA on the performance of sequencing and PCR primers in
221 vivo, as we observed complete eradication of LNA-antimiR-21-treated gliomas subjected to the presence
222 odified ONs, whereas C8-functionalization of LNA adenosines is detrimental to binding affinity and sp
224 trongly suggest that C5-functionalization of LNA pyrimidines is indeed a viable approach for improvin
225 recently introduced C5-functionalization of LNA uridines as an alternative and synthetically more st
227 d delivery, but not intravenous infusion, of LNA-92a significantly (P<0.05) reduced the infarct size
228 on the length of the agLNA, the location of LNA bases, the number of LNA substitutions, and the loca
230 NA, the location of LNA bases, the number of LNA substitutions, and the location of the target sequen
232 rs to optimize the biophysical properties of LNA through additional modification of the sugar skeleto
234 approach for modulation of the properties of LNA: i.e., through functionalization of LNA nucleobases.
236 stablish structure-toxicity relationships of LNA-modified ASOs and decrease the likelihood of hepatot
237 t specificity, and/or enzymatic stability of LNA-modified ONs, whereas C8-functionalization of LNA ad
239 iscrimination attributes similar to those of LNA but greatly improved resistance to exonuclease diges
241 These data suggest that the mechanism of LNAs involves recognition of chromosomal DNA and that LN
242 ocked nucleic acid-modified oligonucleotide (LNA-antimiR-34a) at 6-7 weeks of age when the models dis
245 In mice subjected to pressure overload, LNA-antimiR-34 improved systolic function and attenuated
246 tive, chemically stable, and photostable PAH LNA interstrand communication systems, including pyrene
248 ng screening of fully phosphorothioated (PS)-LNA gapmer ASOs designed against the BACH1 transcript.
249 te Hsp90 protein enhances the activity of PS/LNA or PS/(S)-cEt ASOs, and imply that altering protein
252 onucleotide complementary to the CAG repeat (LNA-CTG) preferentially binds to mutant HTT without affe
255 r improvements were obtained by substituting LNA with 2'-glycylamino-LNA, contributing a positive cha
257 ly improved by applying the surface-tethered LNA probes, in comparison to the corresponding DNA probe
258 n start sites yielded better inhibition than LNAs targeting transcription factor binding sites or an
262 experiments using 2-aminopurine suggest that LNA modifications enhance base stacking of perfectly mat
271 ing 50% formamide allow cells containing the LNA-bound mRNA to be detected and differentiated from th
277 analytical HPLC assay to determine that the LNA-modified 3 cap analogue was incorporated solely into
278 ing protein elF4E complex indicates that the LNA-modified cap-protein complex is more stable by 47.28
285 ified anti-miR oligonucleotides, termed tiny LNAs, that inhibit microRNA seed families expressed by m
288 e mRNA transcripts commonly reduced by toxic LNA ASOs were generally not strongly associated with any
293 cations were designed to investigate whether LNA antisense oligonucleotides (ASOs) have the potential
294 n contrast, inhibition of miR-34a alone with LNA-antimiR-34a (15-mer) provided no benefit in the MI m
296 the G-block of the diblock DNA hairpin with LNA bases results in a modest decrease in the base-to-ba
298 amer 2'-O-methyl oligonucleotide probes with LNA (locked nucleic acid) and 2,6-diaminopurine substitu
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