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1 MSI and Ecc remained as significant after adjustment for
2 MSI had similar predictive accuracy to SEE for functiona
3 MSI tumors had increased frameshift mutations, showed ge
4 MSI/MMR testing reliably identifies LS probands, althoug
5 0.862]; OR, 1.05 [95% CI, 1.03-1.07] per +1% MSI for improvement and AUC, 0.844 [95% CI, 0.818-0.871]
6 0.872]; OR, 1.03 [95% CI, 1.02-1.03] per +1% MSI for improvement and AUC, 0.862 [0.832-0.891]; OR, 1.
8 osatellite sequence in the TGFBR2 gene of 32 MSI-H colon cancer tissues and 6 cell lines (HCT116, LS1
9 for mutations in BRAF and KRAS); and type 5 (MSI-high, non-CIMP, negative for mutations in BRAF and K
17 mulation of basic drugs (like most ARVs), an MSI method to quantify the melanin biomarker pyrrole-2,3
19 nce data from seven anatomical regions of an MSI image of a coronal section of mouse brain were model
20 is limited to the RGB color space, while an MSI sequence contains typically more than ten spectra.
29 tended to be correlated with each other, and MSI and BRAF mutation functioned as key molecular charac
30 ctions between two peptides (cecropin P1 and MSI-78(C1)) and graphene in situ and in real-time using
34 nish jujube cultivars, especially 'PSI' and 'MSI', may be selected to promote the growth of cultivars
36 pe-specific MSI loci will enable panel-based MSI testing to identify patients who are likely to benef
37 DBS that demonstrated good agreement between MSI-CE-MS and validated FIA-MS/MS methods within an accr
38 tes in human urine were reliably measured by MSI-CE-MS via serial injection of seven urine samples wi
41 ionally, nontargeted metabolite profiling by MSI-CE-MS with temporal signal pattern recognition revea
43 contrast agent mass spectrometry imaging (CA-MSI) that utilizes a magnetic resonance imaging (MRI) co
44 er tumors grown in mice were subjected to CA-MSI using Gadoteridol revealing tumor margins and vascul
48 y ionization mass spectrometry imaging (DESI MSI), both as a novel diagnostic tool and as a method to
50 ased on this effort, constant-mode nano-DESI MSI proved to be ideally suited for imaging biological s
51 ization mass spectrometry imaging (nano-DESI MSI) was used to characterize the molecular speciation o
52 eved with an accuracy of 98.2% based on DESI MSI data (PPV 0.96, NVP 1, specificity 0.96, sensitivity
55 s ovarian tissue types were analysed by DESI-MSI and co-registered with their corresponding haematoxy
57 t the molecular information obtained by DESI-MSI/Lasso from pancreatic tissue samples has the potenti
59 electrospray mass spectrometry imaging (DESI-MSI) generates spatially resolved metabolic profiles of
60 y ionization mass spectrometry imaging (DESI-MSI) on 54 banked human cancerous and normal prostate ti
61 y ionization-mass spectrometry imaging (DESI-MSI) was applied to latent fingerprints to obtain not on
62 y ionization mass spectrometry imaging (DESI-MSI) with the least absolute shrinkage and selection ope
63 ion electrospray ionization MS imaging (DESI-MSI), specific changes in lipogenesis and specific lipid
65 term benefits to patients of the use of DESI-MSI for surgical margin evaluation is also needed to det
66 samples demonstrates the capability of DESI-MSI to characterise ovarian samples and to overcome exis
68 and experimental conditions amenable to DESI-MSI, especially for analytes that are weakly attached to
70 Despite their vast phenotypic differences, MSI proteins appear to have an analogous role in governi
71 o a synergistic combination of the different MSI platforms for high-throughput discovery and validati
75 c colorectal cancer locally assessed as dMMR/MSI-H from 31 sites (academic centres and hospitals) in
76 se control in pre-treated patients with dMMR/MSI-H metastatic colorectal cancer, and could be a new t
86 ory airways we have provided a guideline for MSI investigations of respiratory diseases involving the
88 lopment and characterization of a method for MSI based on pulsed laser ablation via a scanning near-f
89 evelopmental period, the temporal window for MSI significantly narrows and is selectively tuned to sp
90 Our results open the door for matrix-free MSI of tissue sections and small cell populations by nan
94 eport a new tool to perform histology guided MSI; instead of analyzing large parts of each tissue sec
95 23 patients suspected of having CMMRD, 6 had MSI and LC tolerance to methylation (CMMRD highly probab
98 hemotherapy plus surgery who had either high MSI or MMRD had a median OS of 9.6 months (95% CI, 0.1-2
99 ents treated with surgery alone who had high MSI or MMRD had a median OS that was not reached (95% CI
100 median OS among those who were neither high MSI nor MMRD of 19.5 months (95% CI, 15.4-35.2 months; h
101 a median OS among those who had neither high MSI nor MMRD of 20.5 months (95% CI, 16.7-27.8 months; h
103 ient (dMMR)/microsatellite instability-high (MSI-H) colorectal cancer has a poor prognosis after trea
106 analysis of mass spectrometry-based imaging (MSI) experiments of biological samples such as tissues.
108 powerful tool in mass spectrometry imaging (MSI) and has been demonstrated to be capable of differen
110 n is performed in mass spectrometry imaging (MSI) experiments to access larger proteins and to assign
111 al development of mass spectrometry imaging (MSI) for the detection of pituitary tumors during surger
112 mbient ionization mass spectrometry imaging (MSI) has been increasingly used to investigate the molec
117 onization (MALDI) Mass Spectrometry Imaging (MSI) is combined with an on-tissue chemical derivatizati
118 t of FFPE tissue, mass spectrometry imaging (MSI) is the most appropriate when morphological and hist
119 ritical aspect of mass spectrometry imaging (MSI) is the need to confidently identify detected analyt
120 onization (MALDI) mass spectrometry imaging (MSI) is used for the multiplex detection and characteriz
121 ant-distance mode mass spectrometry imaging (MSI) of biological samples using nanospray desorption el
123 he feasibility of mass spectrometry imaging (MSI) of the distribution of a finish layer on the synthe
124 his site, we used mass spectrometry imaging (MSI) to analyse MLN tissue from a murine model of S. Typ
125 The ability of mass spectrometry imaging (MSI) to localize panels of biomolecules in tissues, with
126 onization (MALDI)-mass spectrometry imaging (MSI) to map and visualize the three-dimensional spatial
127 he technique as a mass spectrometry imaging (MSI) tool, extracting points at 1 mm spatial resolution
132 ng method such as mass spectrometry imaging (MSI), which can enablede novostudies of nervous system r
135 nalysis combining mass spectroscopy imaging (MSI) and fluorescence imaging was developed to localize
136 tified using commonly employed algorithms in MSI, and we validate our results on synthetic MSI data.
147 iency (MMRD) and microsatellite instability (MSI) are prognostic for survival in many cancers and for
149 .0-75.0] years), microsatellite instability (MSI) phenotype, KRAS, and BRAF V600E mutations were dete
151 tal cancers with microsatellite instability (MSI) represent 15% of all colorectal cancers, including
152 ne whether tumor microsatellite instability (MSI) typing along with immunohistochemistry (IHC) and ML
154 agents and have microsatellite instability (MSI), due to accumulation of errors in repetitive DNA se
155 tational events, microsatellite instability (MSI), epigenetic features, protein expression status, an
156 ere assessed for microsatellite instability (MSI), MLH1 methylation, and MMR protein expression.
158 le in preventing microsatellite instability (MSI), which is a hallmark of Lynch syndrome, activities
159 cancers exhibit microsatellite instability (MSI), which leads to accumulation of large numbers of sm
160 h high levels of microsatellite instability (MSI-H) accumulate mutations at a microsatellite sequence
161 or polyps, tumor microsatellite instability [MSI], mismatch repair [MMR] deficiency) is unknown.
162 markers: type 1 (microsatellite instability [MSI]-high, CpG island methylator phenotype [CIMP] -posit
163 ion was observed in microsatellite-instable (MSI) tumors, as well as in a subgroup of microsatellite-
166 Time to myocardial maximum signal intensity (MSI), MSI value, radiotracer retention index (RI, myocar
169 f generating accurate segmentations of large MSI data sets acquired on the newest generation of MSI i
174 ace analysis mass spectrometry imaging (LESA-MSI) has been shown to be an effective tissue profiling
176 tative studies in order to optimize the LESA-MSI method across several different chemical entities.
177 lity of mutations determined the most likely MSI target genes to be the aminoadipate-semialdehyde deh
178 ts (283 with microsatellite stability or low MSI [median age, 62 years; 219 males (77.4%)] and 20 wit
179 orption electrospray ionization (IR-MALDESI) MSI analyses, two laser pulses are used for analysis at
184 ionization mass spectrometry imaging (MALDI MSI) was used to study the effects of liquid extraction
185 oof of concept study demonstrates that MALDI MSI could be used to directly detect excessive hormonal
188 assisted laser desorption/ionization (MALDI) MSI, no study has so far addressed the necessity of inst
190 assisted laser desorption/ionization (MALDI)-MSI and liquid extraction surface analysis (LESA)-MS(2)I
193 which mass spectral peaks generated by MALDI-MSI could be assigned to unique N-glycan and peptide ide
196 it is likely that the presented direct MALDI-MSI approach is also applicable to other tissues from pi
199 ionization mass spectrometry imaging (MALDI-MSI) and complemented by quantitative measurement of dru
201 /ionization mass spectrometry imaging (MALDI-MSI) can be used to record spatially correlated molecula
202 /ionization mass spectrometry imaging (MALDI-MSI) can be used to simultaneously visualize the lateral
203 ionization mass spectrometry imaging (MALDI-MSI) generally involves embedding the tissue followed by
204 ionization mass spectrometry imaging (MALDI-MSI) in order to characterize the lipid profiles and the
205 ionization-mass spectrometry imaging (MALDI-MSI) is a technique that allows the mapping of metabolit
206 ionization mass spectrometric imaging (MALDI-MSI) of agarose micro-beads randomly arrayed at high-den
207 /ionization mass spectrometry imaging (MALDI-MSI), which has been previously used to directly monitor
209 This study demonstrates the power of MALDI-MSI to reveal unprecedented insights on metabolic outcom
210 5- and 10 mum high spatial resolution MALDI-MSI to the asymmetric Kranz anatomy of Zea mays (maize)
212 interferences that are detrimental to MALDI-MSI, while fixation is undesirable for the analysis of s
219 fixed and fresh tissue compatible with MALDI-MSI and histology is desirable to increase the breadth o
226 o myocardial maximum signal intensity (MSI), MSI value, radiotracer retention index (RI, myocardial a
228 tion (CMMRD highly probable), 15 had neither MSI nor LC tolerance to methylation (unlikely to have CM
230 wed by a discussion of the novel advances of MSI in three-dimensional (3D) cell cultures for accurate
231 Although well-suited, the application of MSI for comparing thousands of spatially defined spotted
232 gy is valuable in biomedical applications of MSI for detection of multiply charged lipids and protein
233 Here, we review the current applications of MSI for drug studies in animal models, followed by a dis
237 g of the genomic drivers and consequences of MSI, and our comprehensive catalogue of tumour-type-spec
238 y, we showed that the temporal dependence of MSI in the optic tectum of Xenopus laevis tadpoles is me
239 ellular mechanisms underlying development of MSI between visual and mechanosensory inputs in the opti
240 se effectiveness, another central feature of MSI stating that the amount of multisensory enhancement
242 Our analysis reveals that the frequency of MSI events is highly variable within and across tumour t
243 In this review, we focus on the function of MSI in the blood and the intestine, and discuss therapeu
244 ta sets acquired on the newest generation of MSI instruments and evaluate these results by comparison
245 for measuring the spectral inconsistency of MSI images without supervision, which yields quantitativ
250 conserved and cancer-specific properties of MSI and reveal opportunities for improved methods of cli
251 introduction to the capabilities and role of MSI in the clinical analysis of patient tissues and disc
253 iver operator curves, was similar to that of MSI (AUC, 0.840 [95% CI, 0.809-0.872]; OR, 1.03 [95% CI,
255 Here, we expand this cellular level view of MSI by focusing on the principle of inverse effectivenes
256 ning set, we identified parameters, based on MSI and LC tolerance to methylation, that detected patie
259 A higher proportion of PDACs with dMMR or MSI expressed the CD274 molecule (PD-L1, 8/9) than PDACs
267 negative for KRAS mutation); type 3 (MSS or MSI low, non-CIMP, negative for BRAF mutation, positive
268 positive for KRAS mutation); type 4 (MSS or MSI-low, non-CIMP, negative for mutations in BRAF and KR
269 ion); type 2 (microsatellite stable [MSS] or MSI-low, CIMP-positive, positive for BRAF mutation, nega
273 h quantitative microspectroscopic imaging (Q-MSI), a technique that determines FRET efficiency and su
274 ization of various phenomena in quantitative MSI, such as to study how the signal depends of the thic
275 scriminant analysis (PCA-LDA) on 3D rendered MSI volume data from MDA-MB-231-HRE-tdTomato breast tumo
277 ization mass spectrometry imaging (AP-SMALDI MSI) has been employed to study the molecular anatomical
278 TGFbeta signaling remains active in some MSI-H CRC cells despite the presence of frameshift mutat
279 prehensive catalogue of tumour-type-specific MSI loci will enable panel-based MSI testing to identify
280 capillary electrophoresis-mass spectrometry (MSI-CE-MS) was developed to provide comparable sample th
283 This allows the generation of synthetic MSI data sets with known ground truth, providing a means
286 of unstable microsatellites, suggesting that MSI may be a continuous, rather than discrete, phenotype
290 ted and then automatically registered to the MSI-prepared tissue section; the registration transforma
292 nd oncogenic pathways recurrently subject to MSI and uncover non-coding loci that frequently display
293 the specific PTP1B inhibitor trodusquemine (MSI-1436), is a potent, specific, and orally bioavailabl
297 of planar and hydrophilic residues, whereas MSI-78(C1) lies down on graphene due to an even distribu
300 elineating the AAR, especially in those with MSI < 0.50 and we would advocate full LV coverage in fut
301 tensities between regions of interest within MSI data sets, we propose the use of Conditional Autoreg
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