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1 NEAT can be applied not only to undirected, but to direc
2 NEAT domains 1, 3, 4, and 5 all bind heme, with domain 5
3 NEAT domains are protein modules that partake in several
4 NEAT is a flexible and efficient test for network enrich
5 NEAT provides biologists and bioinformaticians with a ro
6 EAT is run on the institution's cluster; (3) NEAT allows users to visualize and summarize NGS data ra
8 beta-haemolytic human pathogen, expresses a NEAT protein, Shr, which binds several haemoproteins and
9 s S-layer homology (SLH) protein harboring a NEAT domain binds and directionally transfers heme to th
10 and directionally transfers heme to IsdC, a NEAT protein covalently attached to the cell wall, as we
14 s physical activity, energy expenditure, and NEAT in a dose-dependent manner in both DR and DIO rats,
17 ter-specific parameters can be customized as NEAT is run on the institution's cluster; (3) NEAT allow
21 > 1.86 observed copies per cell for BR9601, NEAT, Belgian, and DBCG89D trials and > 2.25 for the MA.
22 Moreover, the small-sized files produced by NEAT allow users to easily manipulate, consolidate and s
23 opies of a recently discovered domain called NEAT (NEAr Transporter) that has been shown to mediate p
24 determined crystal structures of its central NEAT domain (Hbp2(N2); residues 183-303) in its free and
25 prisingly, our work reveals that the central NEAT domain in Hbp2 binds hemin even though its primary
26 s used by all other previously characterized NEAT domains to coordinate iron in the hemin molecule.
27 ese results indicate that we should consider NEAT proteins in the development of an improved antianth
28 we demonstrate that both of the constituent NEAT domains of Shr are responsible for binding haem, al
31 development of double-clickable executables, NEAT is efficient (completes within <24 hours), easy to
32 n fragment containing the NTD plus the first NEAT domain was found to be sufficient to sequester haem
35 y publicly available tools including Galaxy, NEAT provides three main advantages: (1) Through the dev
36 Binding studies indicate that two IsdH/HarA NEAT domains bind a single molecule of methemoglobin, wh
37 ficance of harboring multiple, non-identical NEAT domains, we purified each individual NEAT domain of
40 e side chain in this position is observed in NEAT domains of several genera of gram-positive pathogen
41 al NEAT domains, we purified each individual NEAT domain of IsdX2 as a GST fusion and analyzed the sp
42 (pM) antibodies that neutralize the two IsdB NEAT domains, IGHV4-39 for NEAT1 and IGHV1-69 for NEAT2.
44 a spectroscopic analysis to show that IsdX2 NEAT domains only scavenge heme from methemoglobin (metH
45 gated dumbbell-shaped structure in which its NEAT domains are properly positioned by a helical linker
46 oglobin using proteins that contain multiple NEAT domains and other domains whose functions are poorl
47 ure Hb using receptors that contain multiple NEAT domains, suggesting that they use a conserved mecha
49 uggest that as humans overeat, activation of NEAT dissipates excess energy to preserve leanness and t
51 rtant, yet seldom investigated, component of NEAT is the energy expenditure of fidgeting-like activit
52 that Shr is the prototype of a new group of NEAT composite proteins involved in haem uptake found in
53 plasticity in the hemin binding mechanism of NEAT domains and provide insight into how L. monocytogen
56 me in the extracellular milieu and relies on NEAT-NEAT interactions to deliver the bound heme to the
58 rce of iron, and indicates that at least one NEAT domain is necessary for the utilization of methaemo
61 f methemoglobin, while the distantly related NEAT domain from the S. aureus IsdC protein binds only h
62 o guide the development of inactive and safe NEAT antigens, we also report the crystal structure of o
66 ry sequence level, our results indicate that NEAT domains belong to the immunoglobulin superfamily.
72 elated with an antibody response against the NEAT domains and a decrease in the numbers of bacteria i
74 three-dimensional solution structure of the NEAT domain from the IsdH/HarA protein, which is the hem
77 o report the crystal structure of one of the NEAT domains (Hal) and identify critical residues mediat
78 METHODS AND In this ancillary study of the NEAT-HFpEF trial (Nitrate's Effects on Activity Toleranc
80 anges in nonexercise activity thermogenesis (NEAT) mediate resistance to weight gain with overfeeding
81 ncreased nonexercise activity thermogenesis (NEAT), which is associated with fidgeting, maintenance o
84 stions concerning the relative role of these NEAT proteins, relative to hemophores and the Isd system
86 1941 tumours from 2391 women recruited to NEAT/BR9601 were analysed on tissue microarrays for HER2
87 resent the NExt generation Analysis Toolbox (NEAT) that allows non-expert users including wet-lab sci
91 genic bacteria employ near-iron transporter (NEAT) domains to acquire heme from hemoglobin during inf
93 ain genes that encode near iron transporter (NEAT) proteins that are genomically distant from the gen
96 or secreted proteins with NEAr Transporter (NEAT) domains play a central role in haem acquisition an
97 A and IsdC bind heme using NEAr Transporter (NEAT) domains that are conserved in many species of path
98 f a conserved domain (near-iron transporter [NEAT]), common in Gram-positive pathogens, elicits prote
100 ith a unique N-terminal domain (NTD) and two NEAT domains separated by a central leucine-rich repeat
101 conserved tri-domain unit consisting of two NEAT (near iron transporter) domains connected by a heli
102 e agent of the disease anthrax, secretes two NEAT (near iron transporter) proteins, IsdX1 and IsdX2,
104 that, rather than acting as isolated units, NEAT domains may be integrated into higher order archite
106 To simplify the control of the workflow, NEAT projects are built around a unique and centralized
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