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1 NOE connectivities, chemical shift indices, J-coupling a
2 NOE cross-peak patterns in 2D (12)C/(12)C-filtered NOESY
3 NOE distance measurements reveal shorter average host-gu
4 NOE experiments suggest that the Thr side chain pushes t
5 NOE NMR measurements of the twist angle in solution conf
6 NOE studies clearly show that the peptide self-associate
7 NOE volumes provided distance constraints for molecular
8 NOE-restrained MD simulations of the [Nle(15)]-HG[11-17]
9 NOE-restrained molecular models of the GI5269 and GI0122
10 NOEs between the aromatic ring protons of Phe9 and speci
11 NOEs between the beta-CH(2) protons of Zn cysteinyl liga
12 Chemical shift analyses, d(NN)(i, i + 1) NOEs, and (15)N{(1)H} heteronuclear NOE values show that
14 r dynamics/ mechanics calculations using 108 NOE distance restraints (including 11 DNA-drug distances
16 ar mechanics (rMD/MM) calculations using 179 NOE distance restraints and refined to an r(6) weighted
18 e investigated through 2D COSY, 2D NOESY, 1D NOE, and diffusion-ordered NMR spectroscopy (DOSY) techn
20 homonuclear 19F-19F and heteronuclear 19F-1H NOE experiments providing selective distance information
21 , which were monitored by the patterns of 1H NOEs between the IQ moieties and the DNA in the three se
22 ents of R1, R1rho, and heteronuclear 13C{1H} NOEs for protonated base (C2, C5, C6, and C8) and sugar
24 uctural refinement based upon a total of 364 NOE-derived distance restraints yielded a structure in w
25 two 4D Co-MDD NOESYs yielded a total of 366 NOEs, resulting in 139 unambiguous upper limit distance
26 RMS deviation of 0.53 +/- 0.22 A based on 51 NOE, 6 hydrogen bond, 6 phi dihedral angle, and 3 disulf
27 neous refinement of the coordinates (against NOE, torsion angle, and dipolar coupling restraints) and
29 e-shared NOESY experiment (1) to collect all NOEs in (2)H/(13)C/(15)N-labeled protein samples with se
33 rther characterized by (19)F NMR and show an NOE cross-peak between residues that are located on diff
34 proton lifetime, solvent accessibility, and NOE connectivity suggest that sequence contexts that pro
35 re employed for conformational analysis, and NOE-based distance mapping between sugar and protein rev
36 ltaOrn delta-proton magnetic anisotropy, and NOE cross-peaks that establish all compounds but 1c and
37 eteronuclear multiple-quantum coherence, and NOE, were used to identify two sulfated steroids, 4-preg
39 tallography, (1)H NMR spectroscopy, COSY and NOE experiments, as well as density functional calculati
42 ant, gel filtration chromatography data, and NOE signals indicated that CaM-N and CaM-C can each bind
45 chemical-shift perturbation experiments and NOE analyses indicated that there are four regions in Pa
46 ntrol could be determined by chiral HPLC and NOE NMR spectroscopy using a modified 1,3-oxathiolane co
47 de the collection of (13)C, (13)C{(1)H}, and NOE data in addition to more complex 2D COSY, ultrafast
48 sed to characterize amino alcohol 2-MAP, and NOE was used to confirm its relative stereochemistry.
50 ution structures as determined by 1H NMR and NOE-restrained molecular dynamics simulations clearly il
52 ly ordered on the nanosecond time scale, and NOE analysis indicates HAfp is located at the water-lipi
54 exhibit Ca(2+)-dependent chemical shifts and NOE patterns consistent with Ca(2+)-induced extrusion of
57 m-Gill relaxation dispersion experiments and NOEs revealed the crystal structure to contain critical
59 les together with other observables, such as NOEs, should lead to a fast and accurate refinement of t
60 signment is required to unambiguously assign NOE correlations for structural determination of folded
61 rates' binding sites, and methyl-TROSY-based NOE spectroscopy performed on {U-(2)H; Ala(beta)-[(13)CH
66 f interchain interactions, as established by NOE spectroscopy, shows the importance of Phe and Arg in
67 olecular dynamics calculations restrained by NOE and dihedral data obtained from NMR spectroscopy.
68 lecular dynamics calculations, restrained by NOE-based distances and empirical restraints, revealed t
72 of backbone-backbone and backbone-side chain NOEs indicate that the ensemble of structures populated
73 idly disappeared, while the amide side chain NOEs were still readily detectable, corresponding to the
74 From these data, we propose characteristic NOE patterns for the formation of the alpha/gamma-peptid
76 om those previously obtained by conventional NOE spectroscopy and heteronuclear NOE spectroscopy NMR
77 us influenzae, determined with conventional, NOE-based NMR spectroscopy, supplemented by extensive re
78 of studies including X-ray crystallography, NOE measurements, and DFT calculations demonstrate that
81 ify the utility of transient one-dimensional NOE spectroscopy for obtaining interligand NOEs compared
82 at cannot be attributed to classical dipolar NOE or chemical exchange peaks have been investigated ex
84 ere directly determined with cross-disulfide NOEs confirming that the oxidation product had the disul
86 an intermolecular nuclear Overhauser effect (NOE) between each metallopeptide His imidazole C4 proton
92 shifts and (15)N nuclear Overhauser effect (NOE) patterns of the peptide in complex with dioctanoylp
96 s is equal to the nuclear Overhauser effect (NOE) where typically continuous saturation of (1)H by ra
98 ID1) based on 670 nuclear Overhauser effect (NOE)-derived distance restraints, 12 hydrogen bonds, and
100 and heteronuclear nuclear Overhauser effect (NOE)] measured at two temperatures (29 and 34 degrees C)
101 f intermolecular nuclear Overhauser effects (NOE) and their assignments, which are difficult to obtai
102 hift indices and nuclear Overhauser effects (NOE) confirmed helices in the presence of membrane mimic
103 ndices (CSI) and nuclear Overhauser effects (NOE) with 600 MHz NMR and CD confirmed helical structure
104 is based on 2813 nuclear Overhauser effects (NOEs) and has an average RMSD to the mean structure of 0
105 uclear (1)H-(1)H nuclear Overhauser effects (NOEs) and heteronuclear (1)H-(15)N NOEs if the paramagne
106 nd heteronuclear nuclear Overhauser effects (NOEs) for sugar and base nuclei, as well as the power de
107 4 intermolecular nuclear Overhauser effects (NOEs) identify the 5'-ApG and 5'-GpT steps as the princi
108 d intermolecular nuclear Overhauser effects (NOEs) indicate the presence of at least three binding si
109 s based on 1H-1H nuclear Overhauser effects (NOEs), hydrogen-bonding networks, 3J(HNHA) coupling cons
110 and protein-DPC nuclear Overhauser effects (NOEs), we define portions of the growth inhibitor likely
113 OESY crosspeaks [nuclear Overhauser effects (NOEs)], and residual dipolar couplings (RDCs), but use o
116 gh both (1)H nuclear Overhauser enhancement (NOE) and paramagnetic relaxation enhancement (PRE) techn
117 ved from NMR nuclear Overhauser enhancement (NOE) data to predict protein structures at low-to-medium
118 using sparse nuclear Overhauser enhancement (NOE) distance restraints involving only NH and methyl gr
120 R1, R2 and nuclear Overhauser enhancement (NOE) values are similar in Abeta40 and Abeta42, except a
121 eteronuclear nuclear Overhauser enhancement (NOE), spin-lattice (R(1)), and spin-spin (R(2)) (13)C re
123 ermolecular nuclear Overhauser enhancements (NOEs) are extremely weak; most have 5- to 6-A upper boun
124 in the two allene oxides (and the equivalent NOE experiment in 12,13-epoxy allene oxides) allowed ass
128 ances, whereas the C-terminal half had fewer NOE cross-peaks and less chemical shift dispersion.
130 which were compared to those calculated from NOE measurements, yielding the relative stereochemistrie
131 ination geometry of GaSz was determined from NOE contacts to be cis-cis with respect to the two chela
133 3)C-(2)H distance measurements and (1)H-(1)H NOE cross peaks indicate that the adamantane moiety of t
136 restrained by distances derived from 24 (1)H NOEs between IQ and DNA, and torsion angles derived from
140 e constants, R(1) and R(2), and (15)N-[(1)H] NOE indicated restricted internal motions in the helical
142 ansverse relaxation (T(2)), and (15)N-{(1)H} NOE data were collected at low protein concentrations (<
143 study [(1)H and (13)C T(1), T(2); (13)C{(1)H}NOE; various fields and temperatures] which reveals prof
148 (1)H NMR revealed a weak C(5) H1' to X(6) H8 NOE, followed by an intense X(6) H8 to X(6) H1' NOE.
149 h2(DTolF)2{d(ApA)} is indicated by the H8/H8 NOE cross-peaks in the 2D ROESY NMR spectrum, whereas th
150 fting of protons located within the helices, NOE enhancements between protons oriented toward the hel
151 analyzed using R(1), R(2), and heteronuclear NOE experiments, variable temperature TROSY 2D [(1)H-(15
152 R(1) and R(2), relaxation and heteronuclear NOE measurements showed that the protein is disordered i
156 , i + 1) NOEs, and (15)N{(1)H} heteronuclear NOE values show that the C-terminal subdomain (residues
158 15)N R 1, R 2) and (1)H- (15)N heteronuclear NOE values indicated that HscB is rigid along its entire
159 axation times and {(1)H}-(15)N heteronuclear NOEs, reveal residue flexibility at the active site that
160 s, and by measuring (1)H-(15)N heteronuclear NOEs, which are all consistent with an unfolded protein.
161 s also have small but positive heteronuclear NOEs, interresidue d(NN) NOEs, and small but significant
163 ncreased AC RNA expression; the AC inhibitor NOE enhanced 4-HPR-induced ceramide species increase and
164 ol based on NMR-derived interligand INPHARMA NOEs to guide the selection of computationally generated
166 ucture-activity relationships by interligand NOE) we were able to identify two chemical fragments tha
167 l NOE spectroscopy for obtaining interligand NOEs compared with traditional steady state two-dimensio
168 s have been synthesized based on interligand NOEs between TLM and a pantetheine analog when both are
169 and experimental data, in which interligand NOEs represent the key element in the rescoring algorith
170 nt work, we have used 1H{19F} intermolecular NOE experiments to examine interactions of hexafluoro-2-
171 as well as arginines, showed intermolecular NOE cross-peaks with D8PG, providing direct evidence for
172 ed S100B was calculated using intermolecular NOE data between S100B and the drug, and indicates that
173 d was generated using only 21 intermolecular NOEs, which uniquely defined both the binding site and t
174 NA upon complex formation and intermolecular NOEs between DDI and the bulged DNA duplex indicate that
176 ay coordinates using RDCs and intermolecular NOEs provided a time-averaged orientation in solution di
179 consistent with experimental intermolecular NOEs, although many conformational sub-states coexist an
180 been located, assignments of intermolecular NOEs become possible even without prior resonance assign
181 -binding site on the basis of intermolecular NOEs between unlabeled phenylalanine and isotopically la
182 cular NOEs and ligand-protein intermolecular NOEs as well as a previously known receptor structure or
183 h a systematic lack of strong intermolecular NOEs could suggest that the p53/S100B(betabeta) interfac
186 xperimentally measured ligand intramolecular NOEs and ligand-protein intermolecular NOEs as well as a
188 cted and observed patterns of protein-ligand NOEs are matched and scored using a fast, deterministic
189 to 2F, the pattern of observed peptide-lipid NOEs is consistent with a parallel orientation of the am
190 of unphosphorylated PLB, with slightly lower NOE values in the transmembrane domain, reflecting less
191 trahigh field allowed increasing the maximal NOE enhancement, resulting in a high number of distance
194 ion rate R(2), and steady-state {(1)H}-(15)N NOE of the backbone amide group at three different magne
195 effects (NOEs) and heteronuclear (1)H-(15)N NOEs if the paramagnetic contribution to the longitudina
196 , residual dipolar couplings, and (1)H-(15)N NOEs, we have optimized and validated the conformational
198 itive heteronuclear NOEs, interresidue d(NN) NOEs, and small but significant protection from solvent
200 n of the 2-position was assigned by observed NOE interactions with the known stereogenic center at th
201 ctly and simultaneously because the observed NOEs and 13C(alpha) chemical shifts correspond to a dyna
202 correctly predicted over 80% of the observed NOEs for all 4 peptides, while the three-monopole force
203 of MD simulations to reproduce the observed NOEs for the four peptides was further estimated for the
209 l assignments stem from the determination of NOE interactions and an X-ray crystallographic analysis
211 on NMR spectroscopy is the limited number of NOE restraints in these systems stemming from extensive
216 roxyl groups were determined on the basis of NOEs, and a previously unknown hydrogen-bonding network
219 rmation allows one to assign the majority of NOEs directly from chemical shifts, which yields accurat
220 Chemical shift analyses and measurement of NOEs detected with a long mixing-time 1H-1H-15N NOESY-HS
223 ocols, which often require a large number of NOEs, and will likely become increasingly relevant as mo
224 The aminoadipic acid unit shows patterns of NOEs and coupling constants consistent with a well-defin
226 ure of the gp41 ectodomain monomer, based on NOE distance restraints and residual dipolar couplings,
229 various temperatures (alternatively, T(2) or NOE at one temperature) ensures the correct interpretati
232 inimal set of intraligand and ligand-protein NOEs, respectively (nuclear Overhauser enhancements).
233 a), (1)H(beta) chemical shifts, amide proton NOEs, and (15)N R(2) relaxation rates were obtained for
234 N-H residual dipolar couplings, amide proton NOEs, and R(2) relaxation rates all indicate that the co
235 hypothesis is also supported by quantitative NOE studies of two encapsulated substrates, which place
237 several unambiguously identified long-range NOE cross-peaks within the loop region and between TM2 a
240 However the lack of medium- and long-range NOEs in 3D (15)N- and (13)C-edited spectra, fast amide p
241 arrel was determined based on 133 long-range NOEs observed between neighboring strands and local chem
245 along with 15N-filtered 1H NMR and selective NOE experiments, identified two mixed-cationic intermedi
246 ' sites permits an H5'/H5''-based sequential NOE assignment procedure, complementary to the conventio
247 m coupling constants, amide-amide sequential NOEs, secondary chemical shifts, and various dynamics me
248 RPF scores are quite rapid to compute since NOE assignments and complete relaxation matrix calculati
249 prediction of intermolecular solvent-solute NOEs based on hard (noninteracting) spheres was develope
250 he remainder of the molecule, solute-solvent NOEs are consistent with preferential solvation of the p
252 tructures based on solution-NMR using sparse NOE data combined with selective isotope labeling is pre
253 c systems using only chemical shifts, sparse NOEs, and domain orientation restraints from residual di
255 y 12 was explored via (1)H NMR spectroscopy, NOE experiments, mass spectrometry, X-ray crystallograph
260 contrast to structure-based protocols, such NOE assignment is not biased toward identifying addition
262 n in the 2F.DMPC complex as evidenced by the NOE between lipid 2.CH and betaCH(2) protons in 4F.DMPC,
263 nuclear spins can dramatically increase the NOE intensity by increasing population differences, but
264 of TM2e in micelles was 14.4 +/- 0.2 ns; the NOE values were greater than 0.63 at 9.4 T, and the orde
266 nificantly large number of violations of the NOE-based distance restraints for a distance range </= 0
268 s facilitated by spin diffusion and that the NOE difference can be assigned to a higher water content
269 d-state NMR experiments we conclude that the NOE is facilitated by spin diffusion and that the NOE di
270 e identified protons automatically yield the NOE assignments, which in turn are used for structure ca
272 bonded secondary structure inferred from the NOEs is, however, not sufficient to confer significant p
277 plings (RDCs) provide a useful complement to NOE data in that they provide orientational constraints
278 site due to buildup of exchange-transferred NOE (trNOE) on the diffusion time scale of the experimen
279 MR spectroscopic measurements of transferred NOE's (trNOE's), of T(1)'s, and of T(1)'s in the rotatin
283 egeneracies reduce the number of unambiguous NOE assignments that can be readily obtained, resulting
285 s were obtained by simulated annealing using NOE-derived distance restraints, and the NMR spectra of
286 d at determining protein structures by using NOE-derived distance constraints together with observed
287 d at determining protein structures by using NOE-derived distance constraints together with observed
288 ma-butyrolactones has been established using NOE spectroscopy, which revealed that 1-substituted, 1,1
289 al stems are experimentally identified using NOE and trans-hydrogen bond connectivity and modeled usi
293 crystal structure, we find much larger water NOEs to the 6- than 7-propionate, suggesting that water
294 signals, enabling the identification of weak NOE crosspeaks with intensities 100x less than those of
295 3C(aromatic)-resolved [1H,1H]-NOESY, wherein NOEs detected on aromatic protons are also obtained.
296 dimensional trNOESY experiments coupled with NOE restrained simulated annealing calculations were use
297 e (1)H/(31)P dipolar HETCOR experiments with NOE mixing differ from those previously obtained by conv
298 nal (1)H/(13)C INEPT HETCOR experiments with NOE mixing support the (1)H/(31)P dipolar HETCOR results
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