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1 NTP binding to this site could promote high-fidelity pro
2 NTP hydrolysis by ABCE1 is stimulated by post-TCs and is
3 NTP hydrolysis by DHX29 is strongly stimulated by 43S co
4 NTP induced deactivation of NF-kappaB in SCCQLL1 cells,
5 NTP's research was key to the nation's first-ever drinki
6 NTP-assisted methane (CH4 ) oxidation over Pd/Al2 O3 was
9 nvert 7,8-dihydroneopterin triphosphate (H(2)NTP) to 6-pyruvoyltetrahydropterin (PPH(4)) in biopterin
10 Ps at frequencies of around one error per 30 NTPs polymerized, making it one of the least accurate po
11 ey feature that primase recognizes to bind a NTP is the 5'-gamma-phosphate since converting a NTP int
19 oductive TL conformations that persist after NTP binding but can be reversed by the elongation factor
20 her, our metabolic analyses unveil the AICAR/NTP balance as a major factor of AICAR antiproliferative
21 on, metabolite profiling points to the AICAR/NTP balance as crucial for optimal utilization of glucos
24 ugh both channels have enough space to allow NTP loading, the percentage of MD conformations containi
25 y Nun in a posttranslocated register allowed NTP binding and nucleotidyl transfer but inhibited pyrop
30 Estimates of annual tuberculosis burden and NTP performance indicators and control variables during
32 allosteric interactions between the DNA- and NTP-binding site prior to the cofactor hydrolysis step a
33 Allosteric interactions between the DNA- and NTP-binding sites of the Escherichia coli DnaB helicase
34 riboswitches can integrate both effector and NTP concentrations to generate a regulatory response app
35 s of the NIEHS's intramural, extramural, and NTP programs and establishing productive partnerships wi
41 A polymerase using a RNA primer-template and NTPs as substrates) but could still bind DNA, indicating
43 a broad and objective approach for assessing NTP's effectiveness, including methodological needs for
44 nd over 8000 studies including all available NTP carcinogenicity, short-term toxicity and genetic tox
45 nonorthologous replacement of the bacterial NTP:AdoCbi kinase (EC 2.7.7.62)/GTP:AdoCbi-P guanylyltra
46 ding non-native pyrimidine- and purine-based NTPs as well as non-native D- and L-sugars (both alpha-
47 ata reveals the functional interplay between NTP triphosphate moiety and base pair hydrogen bonding r
52 ins that isomerize the triphosphate of bound NTP and two Mg(2+) ions from a preinsertion state to a r
53 oside triphosphate (NTP) binding followed by NTP incorporation/pyrophosphate release, quantitatively
54 accommodate the breadth of data produced by NTP, the CEBS data collection component is an integrated
56 ) subsequent metabolic derangement, cerebral NTP, PCr and inorganic phosphate (relative to the exchan
61 we report for the first time that combining NTP treatment with cetuximab led to inhibition of migrat
63 e-ligand affinity chromatography, we confirm NTP binding to 47 different proteins, of which 4 are hyp
65 port the k(pol) and K(d) of all four correct NTP additions by T7 RNAP, which showed a range of values
73 erase in excess of DNA, indicated that deoxy-NTPs were efficiently bound to the polymerase-DNA comple
76 bind NS3h with similar affinities, but each NTP supports a different unwinding rate and processivity
77 on, the RPB9 deletion substantially enhances NTP misincorporation and increases the rate of mismatch
79 A polymerase predicts that ACT also executes NTP selection thereby contributing to high transcription
81 with the non-template DNA strand facilitates NTP sequestration through interaction with the adjacent
83 z 471 (N-methoxysuccinyl-Ala-Ala-Pro-Val, FL-NTP), m/z 332 (N-succinyl-Ala-Ala-Ala, UV-NTP), m/z 176
86 he "secondary channel" is the only route for NTP to reach the active site of the enzyme or if the "ma
87 MD conformations containing enough space for NTP loading through the secondary channel is twice highe
92 A $1 per capita (general population) higher NTP budget (including domestic and external sources) was
93 on was decreased and/or when an imbalance in NTP concentration was introduced (situations that mimic
94 ith Mg(2+) and exhibits a marked increase in NTP incorporation and extension, and surprisingly, it al
95 NS3 helicase domain plays critical roles in NTP-dependent RNA unwinding and translocation during vir
96 (Gln24) relaxed the substrate specificity in NTP hydrolysis, e.g., eliciting a gain of function as a
98 Crick base pair of template DNA and incoming NTP are critical for efficient incorporation, they are n
99 ution of the base encoding the next incoming NTP and the base encoding the 3' end of the nascent RNA,
101 het model for elongation, where the incoming NTP is able to bind in either the pre- or posttranslocat
102 closure of the trigger loop on the incoming NTP via interaction between the C-terminal domain of Rpb
106 Because wild-type pol iota incorporates NTPs in a template-specific manner, certain DNA sequence
107 that T7 RNAP discriminates against incorrect NTP both at the nucleotide binding and incorporation ste
108 ion constant (K(d)) of correct and incorrect NTPs and their incorporation rate constants (k(pol)).
110 more, the compact conformation of inhibitory NTP identified in this study provides precise informatio
111 efficient +1+2 melting increases the initial NTPs Kms of the AG and AT promoters relative to AA or si
113 ary, several distinct examples of initiating NTP-mediated gene regulation are discussed, including a
114 ketogenesis; (iv) depletion of intracellular NTPs; (v) accelerated purine biosynthesis and salvage; a
115 l Toxicology Program 1,408-compound library (NTP 1408, which contains 1,340 unique compounds) for the
118 vealed that human primase can misincorporate NTPs via both template misreading and a primer-template
122 Similarly, primase did not incorporate most NTPs containing hydrophobic bases incapable of Watson-Cr
124 virus-1 primase misincorporates the natural NTPs at frequencies of around one error per 30 NTPs poly
125 orporation, it prevented binding of the next NTP and stimulated pyrophosphorolysis of the nascent tra
127 e workshop and discuss activities that NIEHS/NTP is undertaking to address research recommendations.
128 ranthenes (NFLs), mw 273 nitrotriphenylenes (NTPs), nitrobenz[a]anthracenes (NBaAs), nitrochrysene (N
132 f Na3 V2 (PO4 )2 O2 F nano-tetraprisms (NVPF-NTP) is proposed to enhance the energy density of SIBs.
133 of Ragone plots further discloses that NVPF-NTP presents the best power performance among the state-
134 c voltammetry at varied scan rates, the NVPF-NTP shows long-term cycle life, superior low-temperature
135 i- or trinucleotides, however, the amount of NTP needed to achieve maximal activity dropped 10(3)- to
138 ive center that is induced by the binding of NTP, which could slow down nucleotide addition cycles an
139 eholders (proximal outcome) and citations of NTP's research in scientific publications, reports, cong
140 ese results indicate that the combination of NTP with cetuximab can decrease invasiveness in cetuxima
146 mechanism in which sequential hydrolysis of NTP causes a sequential 5' to 3' movement of the subunit
147 otential drug targets, the identification of NTP binding can directly facilitate structure-based drug
151 n the DnaB-DnaC complex and the mechanism of NTP hydrolysis by the complex have been examined using t
153 ecA2 domains confirmed the essential role of NTP hydrolysis for DHX29's function in initiation and va
157 depending on the nature and concentration of NTPs in solution, such that the fastest reactions are ob
160 e elongation complexes by a quick removal of NTPs leads to formation of RNA-DNA hybrids (R-loops).
161 that RPB9 deletion promotes sequestration of NTPs in the polymerase active center just prior to the p
164 the effect of non-thermal plasmas (NTPs) on NTP catalytic hybrid reactions; namely, modification or
165 L mobility, suppresses the effect of Rpb9 on NTP misincorporation, consistent with a role for Rpb9 in
168 c residue allowed the accommodation of other NTPs, resulting in the preferential use of dATP and the
170 osine analogue, 1,3-diaza-2-oxophenothiazine NTP, across from a templating G but not across from A.
172 addition, baseline cerebral metabolism (PCr/NTP) may identify vulnerable infants prior to invasive s
173 to nonhuman primates resulted in persistent NTP levels in peripheral blood mononuclear cells (half-l
175 idation mechanisms in air nonthermal plasma (NTP) at room temperature and atmospheric pressure were i
176 hat non-thermal atmospheric pressure plasma (NTP) induces death of various cancer cells, including or
178 o explain the effect of non-thermal plasmas (NTPs) on NTP catalytic hybrid reactions; namely, modific
179 The enzyme did not efficiently polymerize NTPs incapable of forming two Watson-Crick hydrogen bond
180 meric form and has the ability to polymerize NTPs as well as dNTPs in vitro, with a strong preference
181 ven these new data, the National TB Program (NTP), operating through a decentralized health system, i
182 ces (NIEHS) and National Toxicology Program (NTP) have developed an integrated, multipronged, consort
183 In 2011, the National Toxicology Program (NTP) organized a workshop to assess the literature for e
184 Division of the National Toxicology Program (NTP) organized a workshop to evaluate the current state
185 l data from the National Toxicology Program (NTP) testing program and other depositors into a single
190 activity was measured in vitro at 300 random NTP concentration combinations, each involving (consiste
191 fied from the authentic olive oil reference, NTP treatments of 60min (Ar/O2 0.1%) on the oil batches
193 assessment of National Toxicology Program's (NTP's) effectiveness across multiple sectors and demonst
194 t role in the National Toxicology Program's (NTP) efforts to advance toxicology from a predominantly
195 ations, the effects of different active site NTPs in both open and closed trigger loop (TL) structure
196 into a hexagon, driven by the binding of six NTPs (or six nonhydrolyzable GTPgammaS analogues) that a
197 xistence of a noncatalytic template-specific NTP binding site in the main channel that is involved in
200 ate and inorganic PPP(i); (ii) it stimulates NTP hydrolysis; and (iii) it biases the outcome of the l
202 oying beta,gamma-bridging atom-'substituted' NTPs, we elucidate how the methylene substitution in the
206 ed a dose-dependent decrease in both (99m)Tc-NTP 15-5 and (18)F-FDG uptake ratios versus saline-treat
207 l results bring data in favor of the (99m)Tc-NTP 15-5 radiotracer for assessing, in vivo, cartilage r
208 me course of cartilage remodeling by (99m)Tc-NTP 15-5 scintigraphy, bone damages by (99m)Tc-hydroxyme
210 iethylammonium)-3-propyl-[15]ane-N5 ((99m)Tc-NTP 15-5) targeting proteoglycans has a pathophysiologic
211 otifs A-F coordinate the viral RNA template, NTPs and magnesium ions to facilitate nucleotide condens
212 otifs A-F coordinate the viral RNA template, NTPs, and magnesium ions to facilitate nucleotide conden
213 athway and uncouples establishment of key TH-NTP contacts from complete TH formation and clamp moveme
218 ric signal from the DNA, which activates the NTP hydrolysis, comes predominantly from the strong DNA-
220 ddition, we show that Archease can alter the NTP specificity of RtcB such that ATP, dGTP or ITP is us
221 pes incubated with GS-5734 in vitro, and the NTP acts as an alternative substrate and RNA-chain termi
222 vored by electrostatic repulsion between the NTP and the highly negatively charged backbones of nucle
224 oduct 5' phosphate group is displaced by the NTP gamma phosphate and the local architecture of the ac
226 rick hydrogen bonding groups from either the NTP or templating bases varied from almost no effect to
227 ces on opposite sides of the protein for the NTP phosphate donor and a 5'-OH single-stranded oligonuc
232 m (competition with UTP for occupancy of the NTP addition site) that differ from those of the RNAP in
233 the Watson-Crick base-pairing region of the NTP base and the nature of the functional groups attache
234 D, a region that forms the outer edge of the NTP entry channel where it may act as a nucleotide senso
235 caused by the impaired sequestration of the NTP substrate in the active center prior to catalysis.
237 nnels has revealed that the diffusion of the NTP through the main channel is greatly disfavored by el
238 Modifications to the 2' position of the NTP, including 2',3'-ddCTP, arabinose-CTP, and 2'-O-meth
239 identify the structural requirements of the NTP, we determined the efficiency of DNA unwinding by T7
241 trinucleotide also dramatically reduced the NTP levels needed to achieve efficient RNA synthesis.
242 owing the rate of elongation by reducing the NTP concentration or using a mutant RNAP increases sever
243 its RNAP through a binding site on RNAP (the NTP addition site) and mechanism (competition with UTP f
244 rease the rate of RNA synthesis and that the NTP bound to this site can be shuttled directly into the
246 r, we now demonstrate biochemically that the NTP GTP is equally capable of activating SAMHD1, but GTP
247 Results from this study suggest that the NTP must be stabilized by specific interactions within t
248 te population was further increased when the NTP concentration was decreased and/or when an imbalance
249 abilized by specific interactions within the NTP-binding site of the protein to achieve efficient hyd
251 ine Guided Search tools that allow access to NTP summary and conclusion data and larger non-NTP datas
253 hat carboxyl-terminal residues contribute to NTP hydrolysis required for translocation and DNA unwind
254 for template binding; Trp-97 contributes to NTP binding and the catalysis step; and Trp-147 maintain
255 its weak binding affinity to PPi relative to NTP, suggesting a mechanism in which PPi is rapidly rele
260 teps, TL folding on nucleoside triphosphate (NTP) binding followed by NTP incorporation/pyrophosphate
261 but not a Walker A nucleoside triphosphate (NTP) binding motif mutant, induced (i) MPB labeling of C
263 A PcfC Walker A nucleoside triphosphate (NTP) binding site mutant (K156T) fractionated with the E
265 ires only an intact nucleoside triphosphate (NTP) binding site within the Rep proteins, indicating th
267 ryl transfer from a nucleoside triphosphate (NTP) donor to a 5'-OH polynucleotide acceptor, either DN
268 template tunnel or nucleoside triphosphate (NTP) entry tunnel and the exterior of the protein, sugge
271 acologically active nucleoside triphosphate (NTP) is efficiently formed in multiple human cell types
272 usion routes of the nucleoside triphosphate (NTP) substrate through the main channel might overlap wi
274 tion of the matched nucleoside triphosphate (NTP), catalysis of transcription elongation, and translo
278 tely or relative to nucleotide triphosphate, NTP) following HI has been observed in cardiac and skele
280 the interaction of nucleoside triphosphates (NTPs) containing modified sugars to develop a better und
285 nce of the cognate Nucleoside triphosphates (NTPs), Adenosine triphosphate (ATP) and Cytosine triphos
289 amydia imports ribonucleotide triphosphates (NTPs) but not deoxyribonucleotide triphosphates (dNTPs)
290 ncreasing the rate of primer initiation (two NTPs --> pppNpN), the rate-limiting step in primer synth
292 nging to the AAA+ superfamily of ATPases use NTP hydrolysis to remodel their versatile substrates.
293 y, the polymerase elongation complex can use NTPs to excise the terminal nucleotide in nascent RNA.
296 FL-NTP), m/z 332 (N-succinyl-Ala-Ala-Ala, UV-NTP), m/z 176 (7-amino-4-methylcoumarin, AMC), and m/z 1
298 energetic study based on MD simulations with NTP loaded in the channels has revealed that the diffusi
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